BGIOSGA028976

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Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028976| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028976, complete gene.| tag = OsI_298...")
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Gene Name

BGIOSGA028976

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028976, complete gene.

LocusTag

OsI_29834

Ensembl Transcript ID

BGIOSGA028976-TA

Ensembl Protein ID

BGIOSGA028976-PA

Length

4515

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27000760..27005274

Sequence Coding Region

27000760..27000960,27001102..27001324,27002323..27002568,27003029..27003079,27003197..27003457
,27003551..27003603,27003684..27004053,27004460..27005274

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27000760..27005274 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27000760..27005274 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTACCACCACCGGCCGCATTCGCCGCCGCCGTCGGACGACGACGTCGTCGTCATCCAGATGAACGCCGCCGCCATCGCCGCCGTCGACGAGTGGAGCTCCACCAACGAGGTGGACGACGCCGCCGCCGGCAAGGGCGGCGGCCTCACCCGCCGGACCTTCAGCCAGGCCTACAAGATGAAGCACCGGACGCCACTGGAGTTCACGTGGAGGCAGGTGGCGTTGCTGAGCTTCCAGTCGCTGGGGGTGGTGTACGGAGACCTGGGGACGTCGCCGCTGTACGTGTTCTCGTCGATCTCGCTGGACGACCCCGGCGAGGCGGACTTCGTCGGAATCCTCAGCATCATCCTCTGGACCTTCACCATGATCTGCCTCGTCAAGTACGTCTTCATCGTCCTCAAAGCTGACGACCATGGAGAAGGTGGCACTTTTGCGCTGTACTCGCTTCTGCGTCAGCATGTGAATTTCAAGGGAAACATGCCAGTGCCAGTCACACACTTGGCATCTGACATCAACCTCAAGTTCCACAGTAAGAAGAGGATTCTGACGTCCAAGCTCCTCAAGTTCTTGGAACAAAGCACAAAATGGCAGGCAGTCATTACCTACATCGTGCTTGCTGGGACTTGCATGGTGCTAGGAGATGGTGCCCTCACTCCAGCCATCTCAGTTCTGTCAGCTGTTCAAGGAATCCAATCAAGATCTTCAAGCATAACACAAGCTCATGTTGTGTTGCTATCTGTGATTATCTTGTTCATACTATTCTTCTTCCAAAAACATGGCACAAGCAAAGTCAGCTTCACTTTTTCTCCCATTATGATCTTGTGGTTTACATTCGTTGCATTCATTGGATTGTACAATATCATCAAGCACTATCCACCAATTCTGAAAGCTGTGTCGCCCCATTACATAATCATATACTTCATAAGGAACAAAAGAGCGGCCTGGGAGACACTTGGAGCAATTGTTCTATGCATAACAGGTGCTGAAGCTATGTTTGCTGACTTGGGTCATTTCAACAAATCATCAATCCAGATGGCATTTTCAGTCATAGTTTATCCATCAATGATCCTTGCGTATGCCGGGCAGGCAGCATTTTTGGTCAAGAACCCTTCAAAGCTCAGCACGACGTTCTACAGTAGTACTCCAGAGCCACTATTTTGGCCCATGTTTATCATAGCAACTTTGGCTGCTATTGTTGCGAGCCAAGCATTGATATCAGCCAGCTTCTCCATCATTCGACAATCAATTGCTTTGGGTTGTTTTCCAAGAGTTACCATGAAGCATACCTCAGGCAAACATGAAGGCCAAGTATACTCTCCAGAGATCAATTACTTTTTGATGGTTGCGTGCATCTTAATTACTGTTGGGTTTAAGGGTGGACCAGAGATAGGGCAAGCCTTTGGCGTGGCAGTGATATTTGTTATGCTTTTTACAACAAACCTGATGACAGTGGTCATGCTTATAATATGGGAAAGTAACATTGCACTTGCCAGTCTATTTTTTGTTTTCTTCTTTTCCATCGAAGGCATTTACATGACCTCGTTAATGAACAAGATTCTACAAGGTGGCTGGGTTCCATTTGCCATTACTGCATTTTTCCTGATAATTACACTATCTTGGACTTATGGAAGAAGTAAGAAGGGTGAATATGAACTTGCCAATGTGATGGAAAGGGAGGAATTTATTAAGACAGTAACAACGAGAAGCCGAGTACCTGGAGTATGCATCTTCTGCACGGATATGATGAATGGCATCCCGCCGATTGTGCGCCATTATGTTCAGCATGTGGCTTCCCTCCGTGAACTGATGGTGTTTGTCACTATCAGGGTTCTTCCGGTGAGAACTGTCCTTCCTGAAGAGCGCTTCATCATAGACAAGCTAGAGCCAGTGGGTGTCTACAGGTGCATAGTCCAATATGGCTATATGGACAACCACAATATGGAGGGTGACGATTACGTTGCATCAGTTATTGCATCCCTCAAGGAAATAGCTGAGAATGATGATGAGATTCTGGTGTTGGATTCAGCTTTGATAAATGGATCAACCTTTGTTCTTGGCAGGACTATCATAAAGATGGGAACTAGGCACAACTGTTTGAAGCGCTTTTTTATTAATAACCTTTACAGGTTCTTGCAAAAGAACTTCAGATCCAACATGTCCAGTCTAAAGATAAATCCTGGTAAAACCTTGCAAGTTGGAATGCTATATGAGATTTGA</cdnaseq>

Protein Sequence

<aaseq>MEYHHRPHSPPPSDDDVVVIQMNAAAIAAVDEWSSTNEVDDAAAGKGGGLTRRTFSQAYKMKHRTPLEFTWRQVALLSFQSLGVVYGDLGTSPLYVFSSISLDDPGEADFVGILSIILWTFTMICLVKYVFIVLKADDHGEGGTFALYSLLRQHVNFKGNMPVPVTHLASDINLKFHSKKRILTSKLLKFLEQSTKWQAVITYIVLAGTCMVLGDGALTPAISVLSAVQGIQSRSSSITQAHVVLLSVIILFILFFFQKHGTSKVSFTFSPIMILWFTFVAFIGLYNIIKHYPPILKAVSPHYIIIYFIRNKRAAWETLGAIVLCITGAEAMFADLGHFNKSSIQMAFSVIVYPSMILAYAGQAAFLVKNPSKLSTTFYSSTPEPLFWPMFIIATLAAIVASQALISASFSIIRQSIALGCFPRVTMKHTSGKHEGQVYSPEINYFLMVACILITVGFKGGPEIGQAFGVAVIFVMLFTTNLMTVVMLIIWESNIALASLFFVFFFSIEGIYMTSLMNKILQGGWVPFAITAFFLIITLSWTYGRSKKGEYELANVMEREEFIKTVTTRSRVPGVCIFCTDMMNGIPPIVRHYVQHVASLRELMVFVTIRVLPVRTVLPEERFIIDKLEPVGVYRCIVQYGYMDNHNMEGDDYVASVIASLKEIAENDDEILVLDSALINGSTFVLGRTIIKMGTRHNCLKRFFINNLYRFLQKNFRSNMSSLKINPGKTLQVGMLYEI</aaseq>

Gene Sequence

<dnaseqindica>1..201#343..565#1564..1809#2270..2320#2438..2698#2792..2844#2925..3294#3701..4515#ATGGAGTACCACCACCGGCCGCATTCGCCGCCGCCGTCGGACGACGACGTCGTCGTCATCCAGATGAACGCCGCCGCCATCGCCGCCGTCGACGAGTGGAGCTCCACCAACGAGGTGGACGACGCCGCCGCCGGCAAGGGCGGCGGCCTCACCCGCCGGACCTTCAGCCAGGCCTACAAGATGAAGCACCGGACGCCACTGGTAAATACGCAGTCCATTTCCGCTGATTTCATGCGCCATTCTTGGTGTTCTTCTCCTCCTTTTGTCGATCGATTCGATCTGCGGTTTGTGGTTGATGTGATCGATCGATCTGTGGATTGGGATTTGGGGAAAAAATTGCAGGAGTTCACGTGGAGGCAGGTGGCGTTGCTGAGCTTCCAGTCGCTGGGGGTGGTGTACGGAGACCTGGGGACGTCGCCGCTGTACGTGTTCTCGTCGATCTCGCTGGACGACCCCGGCGAGGCGGACTTCGTCGGAATCCTCAGCATCATCCTCTGGACCTTCACCATGATCTGCCTCGTCAAGTACGTCTTCATCGTCCTCAAAGCTGACGACCATGGAGAAGGTATATATCTGCACTATACACTCCGTACTCATAAAGGAAGTTGTTTTGGACTGTGACACGGTCTCCAAAACACAACTTTGACTTCTTTTTTCTATAAAAATATTTATTGAAAAGTGATATATGTATACCTTTATGAAAGTATTTTTCAAGACAAATCTAATCATATAATTTTTACATTTTCAAACTCAACGACTTGAGTGTTATTCATGATTTATATTACCAAGGTTTGACTTAAACATTGCCCTAAACGATTTTCTTTATGAGTATGGTGGGAGTATATCACTATATATAGATATATAATTCGGATCTATTTGCCAATCACTTCTTTTTTACTACTAGATCAACGCTCAACAATTCGCGTGTCAATCCTTTTATTGTCATGGAATAACCTTTTGTTGGAAGAAAACTGTATTTTGGTGTACCTTGATAAGCATAGAAGTGCATCCGTCCCAAAATACAGAAATCTAGGATTGAATGAGACATATCCCAGAACTATCAATCTAAACATACATATGTCTATATTAATAATCATAAGATATGTCTCATCTGGTTCTAGATTTTTATATTTTGGGACGAAAAGAGTAGTAGATGAAAAACAAGAAAATCACAAGTTACACTAAATTTTAGATTGTGCAGGTTTAGTGTGTTACACGTTTAATATACTAATAGAGCCGACCGACAAATAGCAAAATTGAAGTAAATCATTTAGTATTAATTTTCCTCAATAATTTTTACAAAAACATCATGCCATTTTAAACATACGTGCGGTGAAACTTTCGAAACATATAATATCAATATCTCTCTTTTTTTTCAAAATTATGACTGGATACATGAAAATCATACAGATAGATTGATCCATCTATAATAATCTCCCAATTTTATAAGGCTTAGATTGATCATCTATAATCTCCTAATTTTATAGGGCTTCTCGAGTGCATGTTCTTTCATTCAATTCTCCTAATTTTGTGATATATTTGTGCTTAATTATCCTGTGAAAGGTGGCACTTTTGCGCTGTACTCGCTTCTGCGTCAGCATGTGAATTTCAAGGGAAACATGCCAGTGCCAGTCACACACTTGGCATCTGACATCAACCTCAAGTTCCACAGTAAGAAGAGGATTCTGACGTCCAAGCTCCTCAAGTTCTTGGAACAAAGCACAAAATGGCAGGCAGTCATTACCTACATCGTGCTTGCTGGGACTTGCATGGTGCTAGGAGATGGTGCCCTCACTCCAGCCATCTCAGGTGTGCATATCATATCCAGCCTTTTCTGATTAGGCACTTATAAAGAGTGTAGGATAATAGTGTATATTTTTGTGAAGTTGTTAGCATCTCAACAGACGAAATAAAATGGGACTGTTCACTCTGATGTCTACCTTACCAAATTTTAGTAATGCCAAAATTTTACATGTTGCGGTTGTGATGTGTAAGTAGTTTTTAGTTTGCAATCTTTGTCAAGATTTTGAGAGAGATTCTAGAACTACCAAACTTTTAGTGGAGTTAATTTTTAACAGTGCTTAGTTTGTTACTTTGCCAAATTTTGGTAAAGCCAAAATTTGATAGGGTTAATTTTGACAACAAAGGGAACAGCCTCGAGGTGTTGTAGGGAGCAGTTTTTGTGCCATGCTAGCATGTAGTTTGCAGATCAATTTTCATTGAATTTGAATGCCCTGATGCATGTTTCTTTCTTAAAAAATGTATTCAGTTCTGTCAGCTGTTCAAGGAATCCAATCAAGATCTTCAAGCATAACACAAGGTAACAACTAGTTGTTTCTTCACCTTTGTATTGCCAACCATTATAATTTAGATAGTGGCATTCTTTCGCATGGCTAGAGAATAAAAAATAAACTGACATTCCTTCTCATTGTTTCAGCTCATGTTGTGTTGCTATCTGTGATTATCTTGTTCATACTATTCTTCTTCCAAAAACATGGCACAAGCAAAGTCAGCTTCACTTTTTCTCCCATTATGATCTTGTGGTTTACATTCGTTGCATTCATTGGATTGTACAATATCATCAAGCACTATCCACCAATTCTGAAAGCTGTGTCGCCCCATTACATAATCATATACTTCATAAGGAACAAAAGAGCGGCCTGGGAGACACTTGGAGCAATTGTTCTATGCATAACAGGTTAGTAATATATCGAGAGAAAAAAAAACATCTACTAGTTTTGCTTCTGGCCAATTAATCTACTAATGACTAAACAGCTGTACTCATAATCAGGTGCTGAAGCTATGTTTGCTGACTTGGGTCATTTCAACAAATCATCAATCCAGGTACATGCATGGTCATTAAATTTTAAATATAATAACATAAGTACTTACCGTGATCTTGAACTTTACCCTGTATCCTGCAGATGGCATTTTCAGTCATAGTTTATCCATCAATGATCCTTGCGTATGCCGGGCAGGCAGCATTTTTGGTCAAGAACCCTTCAAAGCTCAGCACGACGTTCTACAGTAGTACTCCAGAGCCACTATTTTGGCCCATGTTTATCATAGCAACTTTGGCTGCTATTGTTGCGAGCCAAGCATTGATATCAGCCAGCTTCTCCATCATTCGACAATCAATTGCTTTGGGTTGTTTTCCAAGAGTTACCATGAAGCATACCTCAGGCAAACATGAAGGCCAAGTATACTCTCCAGAGATCAATTACTTTTTGATGGTTGCGTGCATCTTAATTACTGTTGGGTTTAAGGGTGGACCAGAGATAGGGCAAGCCTTTGGTAAGCAATCTAATCATATATACTCTTGCCATTTCTAATTGTTAATTTCTCTTTTACTTTTTGTATGAAAATGTTGTAGTTGCAGAGACTTCAAACTCATGAAAAAGGGCTAAATTGCACCCAACACATAACATTATAAATGTTTTTAACATACATATGTGCTCGTGTGTGGTTGGTTGTCAAAACACAGATGGGTATTGCATAAAATTAAAAAAAAAAGTATTCTATAGAAAAGCCATGTCTAACCAGTTGGAATTATCAAGTTACTAGAAACACCACTGCTGGTACCATAGAAACATCAAGGAGAGCACATCTCTATTTGGACAGATGTAAATGACAATACTATGTGCTAAAAATTAACACACATTTGTTGTCACCAGACTGAATAATTTCTTATGGTCTGCAGGCGTGGCAGTGATATTTGTTATGCTTTTTACAACAAACCTGATGACAGTGGTCATGCTTATAATATGGGAAAGTAACATTGCACTTGCCAGTCTATTTTTTGTTTTCTTCTTTTCCATCGAAGGCATTTACATGACCTCGTTAATGAACAAGATTCTACAAGGTGGCTGGGTTCCATTTGCCATTACTGCATTTTTCCTGATAATTACACTATCTTGGACTTATGGAAGAAGTAAGAAGGGTGAATATGAACTTGCCAATGTGATGGAAAGGGAGGAATTTATTAAGACAGTAACAACGAGAAGCCGAGTACCTGGAGTATGCATCTTCTGCACGGATATGATGAATGGCATCCCGCCGATTGTGCGCCATTATGTTCAGCATGTGGCTTCCCTCCGTGAACTGATGGTGTTTGTCACTATCAGGGTTCTTCCGGTGAGAACTGTCCTTCCTGAAGAGCGCTTCATCATAGACAAGCTAGAGCCAGTGGGTGTCTACAGGTGCATAGTCCAATATGGCTATATGGACAACCACAATATGGAGGGTGACGATTACGTTGCATCAGTTATTGCATCCCTCAAGGAAATAGCTGAGAATGATGATGAGATTCTGGTGTTGGATTCAGCTTTGATAAATGGATCAACCTTTGTTCTTGGCAGGACTATCATAAAGATGGGAACTAGGCACAACTGTTTGAAGCGCTTTTTTATTAATAACCTTTACAGGTTCTTGCAAAAGAACTTCAGATCCAACATGTCCAGTCTAAAGATAAATCCTGGTAAAACCTTGCAAGTTGGAATGCTATATGAGATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028976