BGIOSGA028988

From RiceWiki
Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028988, complete gene.| tag = P0711H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028988, complete gene.

LocusTag

P0711H09.17

Ensembl Transcript ID

BGIOSGA028988-TA

Ensembl Protein ID

BGIOSGA028988-PA

Length

3377

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27124212..27127588

Sequence Coding Region

27124212..27124649,27125142..27125645,27126914..27127060,27127256..27127363,27127499..27127588

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27124212..27127588 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27124212..27127588 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCAGCCGGACGCCGCCGCCGACGACCCCTCCCCCTCCCCGTCCCCCAACCCGCCGCCGCCGCCCGTCGCGTGGCCGGAGGACGGCGCGCTGACGCGGGAGTGGGTGGCGGGGCTCACGGCGACGCTGGACTGGTGCTCCCGCAGCCTCCCCGCGGACCGGCTCCCCGACGTGCTCCCCGCGGCGCTCGTCCAGCGGCTCGTCCTCGCGGCCTCCGTCATCCTGCACCGGGAGCCCAACCTCGTGCGGGTGGACCCGCGGCCCGACCAGGCCGTCGTCGTGGTCGGGGACGTCCACGGCCAGCTCCACGACGTCATCTTCCTGCTCCGGGACGCCGGGTTCCCCTCCGACGACCGCGTCTTCGTCTTCAATGGGGATTACGTCGACCGCGGCGCCTGGGGACTCGAGACCTTCCTCCTCCTCCTGGCTTGGAAGGTTTTGCTTCCGAATTCTGTGTTCCTTCTGCGGGGAAATCATGAATCCAAGTACTGTACATCAGTATATGGTTTTGAACAAGAGGTAAATTTTAAATACAAAGGTCAAGGTCCTCAAGTTTATCGGAAGTTCTTAAGATGTTTTGAAGACCTTCCTCTAGCAACAATAATAGCAGGGTGCGTCTACACTGCTCATGGAGGGATTTTCCGTGGGACGATTGTAATGCCATCAAAAAGAACAAAAAAGGGAAAGAAGGGGAATAAATACAAAGCAAATTCCTCTGTTGATCCAACTTTGATGAAGCTCGGATCCTTGGATGAGTTATTGAAAGCAAGGAGAACTGTTCTCGACCCTCCATGGGAGGGCTCAAATTTGATTCCTGGTGATGTTCTTTGGTCTGATCCTTCTTTGGAGATGGGTCTTTCCTCAAATAAAGAAAGAGGCATTGGCTTGCTTTGGGGTCCAGATATCACTCAACAGTTTCTATATACAAATAATTTAAAGTTAATCATCAGGTCACATGAGGGTCCAGATGCAAGAGATAAACGACATGATCTTTTAGGAATGGACAATGGATATACAATTGACCATCATGTGGAATGTGGAAAGTTAATAACTCTTTTCAGTGCTCCAGATTATCCACAGTTCCAAGCTTCAGAGGACCGGTACAACAATTGTGGAGCATATATTGTCCTCAATCCTCCAGATTTTTCCACCCCTGTTTTCCATAGCTTTGAAGCTGTAAAACCTCGACCTAAGGCAAATCCCTACTATGATTTTGAAGATGTAATAGACTCAGATGAAGAGTTAAATTTAGGCGCTATGGACGATGGCTCGGCGAGCAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MSQPDAAADDPSPSPSPNPPPPPVAWPEDGALTREWVAGLTATLDWCSRSLPADRLPDVLPAALVQRLVLAASVILHREPNLVRVDPRPDQAVVVVGDVHGQLHDVIFLLRDAGFPSDDRVFVFNGDYVDRGAWGLETFLLLLAWKVLLPNSVFLLRGNHESKYCTSVYGFEQEVNFKYKGQGPQVYRKFLRCFEDLPLATIIAGCVYTAHGGIFRGTIVMPSKRTKKGKKGNKYKANSSVDPTLMKLGSLDELLKARRTVLDPPWEGSNLIPGDVLWSDPSLEMGLSSNKERGIGLLWGPDITQQFLYTNNLKLIIRSHEGPDARDKRHDLLGMDNGYTIDHHVECGKLITLFSAPDYPQFQASEDRYNNCGAYIVLNPPDFSTPVFHSFEAVKPRPKANPYYDFEDVIDSDEELNLGAMDDGSASS</aaseq>

Gene Sequence

<dnaseqindica>1..438#931..1434#2703..2849#3045..3152#3288..3377#ATGTCGCAGCCGGACGCCGCCGCCGACGACCCCTCCCCCTCCCCGTCCCCCAACCCGCCGCCGCCGCCCGTCGCGTGGCCGGAGGACGGCGCGCTGACGCGGGAGTGGGTGGCGGGGCTCACGGCGACGCTGGACTGGTGCTCCCGCAGCCTCCCCGCGGACCGGCTCCCCGACGTGCTCCCCGCGGCGCTCGTCCAGCGGCTCGTCCTCGCGGCCTCCGTCATCCTGCACCGGGAGCCCAACCTCGTGCGGGTGGACCCGCGGCCCGACCAGGCCGTCGTCGTGGTCGGGGACGTCCACGGCCAGCTCCACGACGTCATCTTCCTGCTCCGGGACGCCGGGTTCCCCTCCGACGACCGCGTCTTCGTCTTCAATGGGGATTACGTCGACCGCGGCGCCTGGGGACTCGAGACCTTCCTCCTCCTCCTGGCTTGGAAGGTGGATCCTTCATCCTGATTCTACTCCATTATGTTAAGCAGATTGCTTTAAAGGCATCATTCCCTCGTTATGTTTAATTGATTAAATAGATGGAAATCCACTGCCATAGATATTAGTTATGCTTTGTACTGATATTATAGCTTCAATTTTTTTTTCAAATAGGATGAACTTTTGGTTCAATTGAACTTGACATTTGACCAGTATATGTTTTGTTCTCTCTAGATGGGTTTCCAGATTTATCTTAAGAGTAAATTCTGAGCTCCAATTCCTAAAATGAAATTCAACAATATTACCACAATTCCGAACACCCTGTAGCTGTAAATGTAATACATACATATATGAAAGGTTGAAATTTTTTAGCACACTAGCATGCATAGCCATCTTCACAAGAGCAAAGAAGCATATGGTTAATTGTTTTAAACTAACCATCTTCAGAAATCAGGGGATTTAAACTATCAGCTAATGGTCATAAACTTGCTTTGTATCTGTTAGGTTTTGCTTCCGAATTCTGTGTTCCTTCTGCGGGGAAATCATGAATCCAAGTACTGTACATCAGTATATGGTTTTGAACAAGAGGTAAATTTTAAATACAAAGGTCAAGGTCCTCAAGTTTATCGGAAGTTCTTAAGATGTTTTGAAGACCTTCCTCTAGCAACAATAATAGCAGGGTGCGTCTACACTGCTCATGGAGGGATTTTCCGTGGGACGATTGTAATGCCATCAAAAAGAACAAAAAAGGGAAAGAAGGGGAATAAATACAAAGCAAATTCCTCTGTTGATCCAACTTTGATGAAGCTCGGATCCTTGGATGAGTTATTGAAAGCAAGGAGAACTGTTCTCGACCCTCCATGGGAGGGCTCAAATTTGATTCCTGGTGATGTTCTTTGGTCTGATCCTTCTTTGGAGATGGGTCTTTCCTCAAATAAAGAAAGAGGCATTGGCTTGCTTTGGGGTCCAGATATCACTCAACAGTTTCTATATACAAATAATTTAAAGGTTTGTTGTCACTCATTTATTATCTCTTTTATCATTAGAACTATCTGGTGAACTGAATTTTTGTTGTTAAGTTATTAAGTATTGCTATGCTTTTATGGTCCTTTAATGTTTGCATCTTATAATACAATTTGAATAGTTCATGGTTCTTTTCCAGTGTCACATTTCCATACCTTTTATATCTGCCGTACATTATCTATTCAGTATTGAATATGTTTGATATACAACAATTACACCATACTACATCTCGTCAGATTGAAAAGATTAGAGAAGCAGGGCAGTTGTGCAAAAACATCGCCATATGTAAGGTGTCATGCTATTCCCAAGTGTGGACATATATGGTTTCTGGTTTGGATCCTTTTTGTATTTATCATGGAACCAATCTAATTAACCCAAAGGGTTGTTGTATCCATAGTGATTGTTTTGTCAATTTGAAATACATGATGTGAATGTAGGCAATACCAACAAATTAAAATTAGTACTACCCAAAAAATCTATGCAGTGATGCTTTTAGTAATATATATTCTGTTACACTTAGTGTTAATCTCTGAATGCATCAGATCTAATGGGCACTTATGTTTGTTGGCCAAGGGCATGTTCATTGCATATTGTGGTACACACAATGAGCATCACTCTTATGCAGGATATGCAGGACAGATACCATGCACAACTGCACAAGTGCACCTCCTGCAATCTAAAACTTGTTTTTCCTAAAAGTCCTAAGAAATCTGTTTTCCGTAATGATTTTTTTTTCTAAAACATGGCATCTGAACAACACTTTTGCATAATAATTTGGGTTAAATTGAACCTGTATGGATCATGGCTTATTACTCCCTTTTGATATTGCATACTGTCTTGCTGCATTTCTTGGATTGTTGCACACTCAACAATGTCTAGCTCTAGGTGTTCTTTGGCTGGTTAGTTGAATATGGTAGAACTACTTCTATAAGTTCGAGCATGAATCTAACATAGCAATTTTCTTCCTTTAAAAAATGGACAAAAGAACACATATGTTGCAATTCATGAATGCAGTTGCTGAAGAGCTAGATGGTTCTAAACTTCTAATTATTTGTGTGTTTGTGTTAACTTAGAATGATTACTGATATATATATCCTCCCAACTTGATCAATTGGCATATTTGTATGGAAAATGGCTAGCACATTGAGCATGTCCCTTTAACATTTTTACTAGGGAGTAGGCACCCATTCACCGTCATACAACTATGTCCATTTTAAATTCATATTCTTACTTCCTCTTTTATTTGAACAAAGTTAATCATCAGGTCACATGAGGGTCCAGATGCAAGAGATAAACGACATGATCTTTTAGGAATGGACAATGGATATACAATTGACCATCATGTGGAATGTGGAAAGTTAATAACTCTTTTCAGTGCTCCAGATTATCCACAGTTCCAAGTAATTCTCTGTCACATGATTTTCCGTTCACCTTGAAAATAATCTTTTATTATTGAAACATTATACTGTATATGAATTCCACAAGTGAAAATCTACTCAACTTTTTTTTGGGGCATTCCATGCTAAACGATTTGATTTTATGATTGGTTGATCATATCTATTGTTTCTCATATTTGATATTGTCTATTGGTACAGGCTTCAGAGGACCGGTACAACAATTGTGGAGCATATATTGTCCTCAATCCTCCAGATTTTTCCACCCCTGTTTTCCATAGCTTTGAAGCTGTAAAACCTCGACCTAAGGTATGCGCTGTACATTGTATTCCTATCATTTGATATTTTATCATTGAGTAATCCTTGATTCTATTAAGTAGCTGTATGGTGTGATTTACCTACCCAAAAAAAGAATCTTGTTAGAACAATATTTTTTGGGTGCAGGCAAATCCCTACTATGATTTTGAAGATGTAATAGACTCAGATGAAGAGTTAAATTTAGGCGCTATGGACGATGGCTCGGCGAGCAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028988