Os11g0170700
| Gene Name |
Os11g0170700 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001189445.1 GI:297728020 GeneID:9271221 |
| Length |
4800 bp |
| Definition |
Oryza sativa Japonica Group Os11g0170700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:3435515..3440314 |
| Sequence Coding Region |
3435812..3437971 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:3435515..3440314 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:3435515..3440314 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>acaggagctcgtccaagagcattggtggcaagaccccatacgagctttggaatggagtcccactggccgtgcaccacctgcgcgttccggtgtgtggcacatgtgaaggtcacggcgccgaacatgaagaagctggacgaccgcagccggccgatgattttcgtcggctatgagcctggctccaaggcgtaccgtgtctacgacccggcgacgcggcgcgtccacgtctcccgagacgtggtgttcgacaaggaggcgcagtggaattgggatggcgaggcggccgccaacgtcgactccggcttcaccatcgagtacaccacggtgtaccacctagcgacggcggccccgacgcaaatcggcacggagcacgggggagctccggcctcgccgcgctcgcctgcatcaggctcgactccgccaactccgcctctggccgaagagccgccggtggagttcgtctctcctccgcctgacgtggaggatgatctcgacgcggaccacgatgacgcgccacttcgtttccatcgcattgacgacgtgcttgggcccgcgacgccgccgggacaggccgttcgcgagctgagcgaggaactgttcgcggtaacagcggaggagccggcgtcgttcgctgaagcagagcagcacagctactggcgacaatcgatgatcaaggagatgcgctccattgaagcaaacaagacgtggcggctcgttgatccgccggctcgccaacatccgatcgggctcaagtgggtctataaggccaagaaagacgccgccggcaacatcaccaagtacaaagcatgcctggtcgcgaaggggtacgtgcagcggcagggcatcgacttcgacgaggtgttcgcaccggtggcgcggctcaagtccgtccgcttgctgctggcgcatgcggcgtgtgagggcagggccgtgcatcacatggacgtcaaatcggcgttcttgaacgagcttctggaggaggtctatgtcgcgcagccgccgggattcgtcgtcgacgggcaagagcacaaggtgctccaccttgacaaggcgctctatgggctgcgtcaggcacagcgcgcttggtacgccaagctcgacgcgtcgctgctaatgctcggttttcaccggagcgactcggaacacgctgtgtacatgcgtggcatgggtgtgcatcggctggtggtcggggtgtacatcaacgacctcatcatcacgggcggccactccggcgagctcatgcagttcaaggaggagatgaagggcacttttcagatgagcgatctcgggctgttgaaatactatctcggcttggaggtgaaccagtctgaggacgggatcacggtgtgccagagtgcctacgctcagaagattcttgaggtggctggcatggccgggagcaatccaagcctgactcccatggagacgcgcctgaaattgagtaagtcaagtactgctcctgctgttgatgccactgattatcggcgaattgtgggctctttgcgctatctggtgaatttgagaccagacttggcgtactatgtgggctatgtcagcagattcatggagaaacccaccgtcgaacacctggcggccgtgaagcgtgtgctgcgatacatcgctagcactatcggctacggctgccactacatgaggaagaaggaggctgcaagtctcgtcggcttcagtgacagtgatctcgccggcgacctcgacactcgcaagagcacctccggcgttttcttcttcctcggcgacaacccaatcacctggcagtcgcagaaacagaaggttgtggcattgtcgtcatgcgaagctgagtacatcgcagcgacaacggtggcctgccaaggcgtgtggctggcgcgtctccttgctgagctccggggagaggaggccgacgccgtcacgttgaagattgacaaccaatccgcaatcatgctcagtaagaaccctatcttccatgatcgcagcaaacatatagacacaagataccactacatcagggaatgcatcgaggagggcagggtgaaggccgagttcatcggcactgacgggcagttggcggacatcctgacgaaggcactcgggcgcgacagattcatcgaacttcgttctcggattggcctcatcgaaatcaaaactccacgcaaggtttag</cdnaseq> |
| Protein Sequence |
<aaseq>TGARPRALVARPHTSFGMESHWPCTTCAFRCVAHVKVTAPNMKK LDDRSRPMIFVGYEPGSKAYRVYDPATRRVHVSRDVVFDKEAQWNWDGEAAANVDSGF TIEYTTVYHLATAAPTQIGTEHGGAPASPRSPASGSTPPTPPLAEEPPVEFVSPPPDV EDDLDADHDDAPLRFHRIDDVLGPATPPGQAVRELSEELFAVTAEEPASFAEAEQHSY WRQSMIKEMRSIEANKTWRLVDPPARQHPIGLKWVYKAKKDAAGNITKYKACLVAKGY VQRQGIDFDEVFAPVARLKSVRLLLAHAACEGRAVHHMDVKSAFLNELLEEVYVAQPP GFVVDGQEHKVLHLDKALYGLRQAQRAWYAKLDASLLMLGFHRSDSEHAVYMRGMGVH RLVVGVYINDLIITGGHSGELMQFKEEMKGTFQMSDLGLLKYYLGLEVNQSEDGITVC QSAYAQKILEVAGMAGSNPSLTPMETRLKLSKSSTAPAVDATDYRRIVGSLRYLVNLR PDLAYYVGYVSRFMEKPTVEHLAAVKRVLRYIASTIGYGCHYMRKKEAASLVGFSDSD LAGDLDTRKSTSGVFFFLGDNPITWQSQKQKVVALSSCEAEYIAATTVACQGVWLARL LAELRGEEADAVTLKIDNQSAIMLSKNPIFHDRSKHIDTRYHYIRECIEEGRVKAEFI GTDGQLADILTKALGRDRFIELRSRIGLIEIKTPRKV</aaseq> |
| Gene Sequence |
<dnaseqindica>2344..4503#gcaagcagtttgcagcgccaaactcctctgtttgctctgttcttcgcgttttcagacggtgtacagtgttccacaaaggtgttcgtccaaagtgtcgcgtgtgttcggctcgccgattggttgggtgattcctgacaattggtatcagagcgaggtttagggcgtggacacgtgatcgcgcactagaagcagcattcatgcctcgccgtcgctcgtcgtccccgatcgggcatactctaggaagttccggcggccgcgccatgggcagtggcgggaatgatcgcgggctgttgattcaccgcgtggtcaaggaggcgggaggtccggcaaacaacccggtgctcatgaagacgaattacaacgtatggtcactgttgatgaagatcaagttgcaagctcgctgcttgtggggagcaatcgacccaggagaggttgagctccatgaagatcggatgacactcgatgccatctgcagcgtggtccccgcggagatgatctccacgctggcgaccaaggagacggcgaaggcggcgtgggactgcatcaagaccatgcgcgtcgtcaacgaccgcattcgcaaggcgagtgcacagaagctgcgctcggaatacgaggctctcgcgtttcgcgacggggagtcggtcgaggatttcgccatgcgcctcaacaccgtcgtgacgcagctgtccacattgggggatcccgagccagatgacaaagtcgtcgagaaatatctctgcgtcgcgcgtcccaggttctcccagctagttctctccattgaaaccctacttgacatctccactttgacgctggaggaagtcactggacgcctcaaggcggttgaggactccggccagtcgtcgtcctcgtcttcaccaggtgccggggccaagctctacctcactgaggaggagtggcttgaacgtcacaagaagaagcagcaggaggccaagaagaggaatggcggagggaacggccgtggcaagcgccgcggcggacaagggcacactagcggcggcggcggtggcgtcgggaacgcggacagcactggcgttggcccagctcgcaagaccgacaagtgccgcaactgtggcaaacttggccactgtgccaaggattgcaggagcaagcccaagcaggagcaggcccacgtggtccaggacgaggatgagcccacgctcatgctcatgacaggcagctgcattgatgaggtggaggagacgggcgcgcagtgcgcgacgccatcgccgctcgcgccgcagcctcgcccagacgtcatcgagctggttgagcaaaaggtgttcaccgcgctggacgacgccaccgaccacgacaacaagtgctggatcctcgacaccggcgcgtcgaaccacatgaccggctcgagggcggcgttctctgacatcgacaccaatgtcgctggcaatgtctggctcggggacagcttactcgtccgcatcggaggacgcgggacggtactgtttgcctgcaagaacagcgaacaccgcatgctgcacaacacatactaccttccgcgtctcgccgccaacatcataagtgtggggcagctggatgagacgggcttcaaggtggtggtcgaggatggcgtcatgcgcgtgtgggatgagcggcgtcgtctgctcgcttgcatagctcgcagcccgggccggctttacttgctcgacatcaaccttgcacggccggtctgcctgatggcgcgcgcgggggaggacgcgtggcgttggcatgctcgtttcggccacatcaacttcgctgcattgcgcaagatgggccgtgagtccctggtacgtggtttgcctgtcttgtcgcaggtcgaacgggtatgcgaggcgtgcctcgccggcaagcaccggcgtgcccccttcgcgcaagaggcactccacaacgccactgagctgctcgcgctgatccatggcgatctttgtggtccgatcacaccggcgacacccagcggcaaccgctacttcctcctgctcgtcgacgactacagccgctacatgtggctgacgctcctcgccaccaaagacggtgcaccggctgccatcaagcgcgttcaggcggcggccgaacgcaagagcggccgcaagctttgggcactccgcaccgatcgcgggggcgagttcaccgtcggccacttcaccgagtattgtgcggagctcggggtgcaacgcgagctgacggctccctactcgccgcaacaaaacggcgtcgtcgaacgccggaaccagtccgttgtgggcacggcgcgaagcatgcttaaggccaaaggactcctaggtatgttttggggggaggcgatgaacacggctgtgtatctgttgaacaggagctcgtccaagagcattggtggcaagaccccatacgagctttggaatggagtcccactggccgtgcaccacctgcgcgttccggtgtgtggcacatgtgaaggtcacggcgccgaacatgaagaagctggacgaccgcagccggccgatgattttcgtcggctatgagcctggctccaaggcgtaccgtgtctacgacccggcgacgcggcgcgtccacgtctcccgagacgtggtgttcgacaaggaggcgcagtggaattgggatggcgaggcggccgccaacgtcgactccggcttcaccatcgagtacaccacggtgtaccacctagcgacggcggccccgacgcaaatcggcacggagcacgggggagctccggcctcgccgcgctcgcctgcatcaggctcgactccgccaactccgcctctggccgaagagccgccggtggagttcgtctctcctccgcctgacgtggaggatgatctcgacgcggaccacgatgacgcgccacttcgtttccatcgcattgacgacgtgcttgggcccgcgacgccgccgggacaggccgttcgcgagctgagcgaggaactgttcgcggtaacagcggaggagccggcgtcgttcgctgaagcagagcagcacagctactggcgacaatcgatgatcaaggagatgcgctccattgaagcaaacaagacgtggcggctcgttgatccgccggctcgccaacatccgatcgggctcaagtgggtctataaggccaagaaagacgccgccggcaacatcaccaagtacaaagcatgcctggtcgcgaaggggtacgtgcagcggcagggcatcgacttcgacgaggtgttcgcaccggtggcgcggctcaagtccgtccgcttgctgctggcgcatgcggcgtgtgagggcagggccgtgcatcacatggacgtcaaatcggcgttcttgaacgagcttctggaggaggtctatgtcgcgcagccgccgggattcgtcgtcgacgggcaagagcacaaggtgctccaccttgacaaggcgctctatgggctgcgtcaggcacagcgcgcttggtacgccaagctcgacgcgtcgctgctaatgctcggttttcaccggagcgactcggaacacgctgtgtacatgcgtggcatgggtgtgcatcggctggtggtcggggtgtacatcaacgacctcatcatcacgggcggccactccggcgagctcatgcagttcaaggaggagatgaagggcacttttcagatgagcgatctcgggctgttgaaatactatctcggcttggaggtgaaccagtctgaggacgggatcacggtgtgccagagtgcctacgctcagaagattcttgaggtggctggcatggccgggagcaatccaagcctgactcccatggagacgcgcctgaaattgagtaagtcaagtactgctcctgctgttgatgccactgattatcggcgaattgtgggctctttgcgctatctggtgaatttgagaccagacttggcgtactatgtgggctatgtcagcagattcatggagaaacccaccgtcgaacacctggcggccgtgaagcgtgtgctgcgatacatcgctagcactatcggctacggctgccactacatgaggaagaaggaggctgcaagtctcgtcggcttcagtgacagtgatctcgccggcgacctcgacactcgcaagagcacctccggcgttttcttcttcctcggcgacaacccaatcacctggcagtcgcagaaacagaaggttgtggcattgtcgtcatgcgaagctgagtacatcgcagcgacaacggtggcctgccaaggcgtgtggctggcgcgtctccttgctgagctccggggagaggaggccgacgccgtcacgttgaagattgacaaccaatccgcaatcatgctcagtaagaaccctatcttccatgatcgcagcaaacatatagacacaagataccactacatcagggaatgcatcgaggagggcagggtgaaggccgagttcatcggcactgacgggcagttggcggacatcctgacgaaggcactcgggcgcgacagattcatcgaacttcgttctcggattggcctcatcgaaatcaaaactccacgcaaggtttagggggagatttgttagtagataaaccttgcgtgtttgcatgtttctctttctgttttgcatgcgcgcgagccccggtttgtggaagccgtgcgaatagatgtcatggcacgagaatagctcggcgtggcgctggcgacgggggcgtgcacgcgttctgcggatccgtggggatggacacgatcaaatccgcgacgtgggaatgtttctgaagcacacgtttcccttctttgcatccttgtatttgctataaataaggagaagaaaaaacctgaaaagctgcaagcagttcgtagcgcc</dnaseqindica> |
| External Link(s) |
