BGIOSGA028998

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Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028998| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028998, complete gene.| tag = P0686C0...")
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Gene Name

BGIOSGA028998

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028998, complete gene.

LocusTag

P0686C03.125

Ensembl Transcript ID

BGIOSGA028998-TA

Ensembl Protein ID

BGIOSGA028998-PA

Length

3269

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27227882..27231150

Sequence Coding Region

27227882..27227896,27228675..27228788,27229088..27229219,27229317..27229445,27229615..27230012
,27230094..27230193,27230325..27230384,27230472..27230558,27230649..27230777
,27230851..27231150

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27227882..27231150 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27227882..27231150 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACTCGAGAAGACAACCAACAAAGATAAGATGCTCCGCAGAAGATATTCTCTTAACCTGCCAGAGCATTTGCCTGAGCATCACGTGATTACAAGTGCAGAACAAAGTGAGAAAACCATATCAAAGTCTGTTGCAGACTTAGTTTGGGAGATAGCAGCCCTTGAGGAGGAAGTTGTTCGCAAGGAACTGCATTTGCTTTCCCTCTACAGGGCAGCATTTGATCAACACCTAGGTGTATCCCCTCGTGTTTCTACCCAGGTGGATCAAGAAATACACCATCAGAAAAGCAGAAAGAAAGCTGATGAAGGTGCCCTCCGATTGAGAAATATCAAGGAGTCAGCATCCTACAACTTGCCAACAGTATCAACAGTTTCAGATTCTAAACATGGGCTGTCGAGATCATCTTCAGGACATTCTAGCCTTGCAAATTTCTTGAGTGCTTCAATCGCTGAATATGTGCCAAAGATCTCTTGCAAACTTTCGGAGGACATCGTAAGATGCATTTCTGCAGTATACTGCAAACTTGCAAGCCAGTCATCACAAAATTCGGCGGATTTTGAGACTTTATCAACTCCTTCATTCTCCTCTTCATCAAGTACATTTTCTTTAAAGCACCGTGTTGATAGTTGGAGTCCCCGATGCCATTACAATGTCAACACAAGCTCTGACAAATATGATTCATTGAATGAGAGAAGTGAACAATACAATGGGATGATAATATGCCCAAGGATATATATAGATGCAGAAAAGTTTGAATATGCCTCTAAAATGCTAGAGACTGTCAGATCGCTGATAAAACGACTTGAGAAAATTGACCCAACAAAAATGGCACATGAAGAGCAGCTCTGTTTTTGGATCAACATCCACAACGCTTTGGTGATGCATGCTTTTATGGCTTATGGACTTCAGGAGAAACGCATGAAAAACACAGACATGATTCTGAAGGCTGCATATAATGTGGGTGGGCTTTCAGTAAACGCCCAAATTATCCAGAACTCAATTATTGGATGCCAATCCCATCGCACTTCAGTGTGGGTACGGACTCTATTTACTCCACTGAAAAAATCGGCATCAGGGAGCTCCATACATCCATATGCTCTTCATCCTCCAGAGCCACTTGCTCATTTTGCTCTTTCCACTGGAGCAATTTCAGATCCACCTGTGAGGCTGTACACTGCCAAGAAAGTGAATCATCAACTGGATCAAGCCAGGACTGAGTTCATTCAAGCTAGTGTCATAGTCAGAAAGCAGACAATCTTCCTACCTAAAGTTCTCCATCATTATGCGAAGGATGCTGCTCTCGAGTTGCCTGACTTGGTTGAGATGGCATGTGAGATCATGCCTGAAGCTCAACAAAAGGAAATCAGACAATGTCTTCGGAGAAGAATAGACAAGTGTGTTGAGTGGATCCCCTTCAAATCATCTTTCAGATATACTATACATAGGAGTTTGGCTGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSLEKTTNKDKMLRRRYSLNLPEHLPEHHVITSAEQSEKTISKSVADLVWEIAALEEEVVRKELHLLSLYRAAFDQHLGVSPRVSTQVDQEIHHQKSRKKADEGALRLRNIKESASYNLPTVSTVSDSKHGLSRSSSGHSSLANFLSASIAEYVPKISCKLSEDIVRCISAVYCKLASQSSQNSADFETLSTPSFSSSSSTFSLKHRVDSWSPRCHYNVNTSSDKYDSLNERSEQYNGMIICPRIYIDAEKFEYASKMLETVRSLIKRLEKIDPTKMAHEEQLCFWINIHNALVMHAFMAYGLQEKRMKNTDMILKAAYNVGGLSVNAQIIQNSIIGCQSHRTSVWVRTLFTPLKKSASGSSIHPYALHPPEPLAHFALSTGAISDPPVRLYTAKKVNHQLDQARTEFIQASVIVRKQTIFLPKVLHHYAKDAALELPDLVEMACEIMPEAQQKEIRQCLRRRIDKCVEWIPFKSSFRYTIHRSLAE</aaseq>

Gene Sequence

<dnaseqindica>1..15#794..907#1207..1338#1436..1564#1734..2131#2213..2312#2444..2503#2591..2677#2768..2896#2970..3269#ATGTCACTCGAGAAGGTTAGCAAGCATACACAATCTTTTCAGCAGGCTGCTGATAAATTTTGTTCTTCTAGGCTCTTACAATTTTTGCAGAAAGCATTTGTGAGATAATAGCAGCTAGAAGAAAGCAGAATCGATTAATGTATAGATAAGCAGGGCAACTCTAATCGTTTTTATCAATGTCCAATATATTGTTCATCACCATTTGGTTGCATCATAATTCAGAGGCAGCAGCATTTTGCTGCATCAAGCCTCCCTTTTTTTTCTGTGTTGCGGTGCTGTGTCATTTTCTACACCAACTCACTTGACAAACTGTCAGGTGAGACCGTGAGACATGTTACTGTAAATGATGTTGAAAGTTGCTCTTCTAGAAACAGCAAAATCCCCCTTTATTGTGAGCGTGAAGAAGAATAGCAACGTACACAGTTGTACAAGCAAATCATCCAGCACACTATCTGTTCCTATTGTCTGCTATCTTTGACTACAAAACATCTGATTCACTATTCTCAGCTGCTTAGCTTTCAGTTTGTTTGAATGATTATTCTGATTAAGCAGCGTTCTTACTTTAGTTCTTGTATTTTCAGCGTTGTAAGCACACATGGAAATGTATTGGACATATCGCCTCGACTCTCTTATCACAAACCTGTGGGTAATTTAAATTCCCTATTTTGTTAGTTATTTTGTTAATAACTTTTCCCCGGTGTCTTGTTTCAAATAAGCAAAAGTTACTACAAACTTAAATTACTACTTTCTTACTGAATTTTGCTTTAATGATATTATTTTCATGATTGTGCAGACAACCAACAAAGATAAGATGCTCCGCAGAAGATATTCTCTTAACCTGCCAGAGCATTTGCCTGAGCATCACGTGATTACAAGTGCAGAACAAAGTGAGAAAACCATATCAAAGGTTTGCTCCACATCCTCATAAGTTGCATAGTATTTCATGATCTCAAGGTCCTATTTGTTTCCAAAAGCTGAAGAAAAGCTGTTCAGTTCAGGTTTTATACCCGTACTTTTGTTCTAATCATCTTGCTTTTTTTCAAAATAACTTGAGGCCTTAAGAATAGTAACAAAGATCATGTGCCATAATAATGATACTCTGAAAACAGTGTTCCAACTTTAAAATTCAAAACGAAGTGAAAAGGCAAATGAAATTATAAACATTTAGTTATCGATATCTGATCACTGACCTTGTGGTTCCTGCAGTCTGTTGCAGACTTAGTTTGGGAGATAGCAGCCCTTGAGGAGGAAGTTGTTCGCAAGGAACTGCATTTGCTTTCCCTCTACAGGGCAGCATTTGATCAACACCTAGGTGTATCCCCTCGTGTTTCTACCCAGGTACATTCCTTGCACCTTGGATGGATCAATTTTCAGAACTATACTGCACATAAATTCAGAGAGTATACAGTATATTTAGGTTTACAATCATGATCAGGTGGATCAAGAAATACACCATCAGAAAAGCAGAAAGAAAGCTGATGAAGGTGCCCTCCGATTGAGAAATATCAAGGAGTCAGCATCCTACAACTTGCCAACAGTATCAACAGTTTCAGATTCTAAACATGTATGAACAGTCTCTTCTTTTAGTTCTTCTGATAAAACTTACCAGTTTGTGCCAGTTTCAGTTATATATTTTTCCTCTTCAAAGTACAGATTTTAGCTCAGGCACAAACATATGGTTTTCTGTCAAAATCTCTCAAACTGAGAAAATCTATCTTTCATGTTTTTCACAGGGGCTGTCGAGATCATCTTCAGGACATTCTAGCCTTGCAAATTTCTTGAGTGCTTCAATCGCTGAATATGTGCCAAAGATCTCTTGCAAACTTTCGGAGGACATCGTAAGATGCATTTCTGCAGTATACTGCAAACTTGCAAGCCAGTCATCACAAAATTCGGCGGATTTTGAGACTTTATCAACTCCTTCATTCTCCTCTTCATCAAGTACATTTTCTTTAAAGCACCGTGTTGATAGTTGGAGTCCCCGATGCCATTACAATGTCAACACAAGCTCTGACAAATATGATTCATTGAATGAGAGAAGTGAACAATACAATGGGATGATAATATGCCCAAGGATATATATAGATGCAGAAAAGTTTGAATATGCCTCTAAAATGCTAGAGACTGTCAGGTAAGCAACTCTGCAATAAAGAAATCCTATAAAGCAGGAAATGCTATTTATTTACTTATGTTCACTTTTTTTTAATCTCAGATCGCTGATAAAACGACTTGAGAAAATTGACCCAACAAAAATGGCACATGAAGAGCAGCTCTGTTTTTGGATCAACATCCACAACGCTTTGGTGATGCATGTATGCATAGTAGTCATAACATTTTTTTTTTATGACTGACAACAGTTGTCACCTTCGCTATGTTCTACACTTCAGTGTTAAACCCAGAATGCATGCACACCTAACCCGCAGTATTTTCTGAAATATAACAGGCTTTTATGGCTTATGGACTTCAGGAGAAACGCATGAAAAACACAGACATGATTCTGAAGGTACACAACTATCAAATTTGAACAATGATACTGTCATCATTTGAAATGTTTTGATATATCTTACATACTTGAACAATCTGTTGTCAGGCTGCATATAATGTGGGTGGGCTTTCAGTAAACGCCCAAATTATCCAGAACTCAATTATTGGATGCCAATCCCATCGCACTTCAGTGGTATGGTTTACACCTGCACAATGTTTTCCACCAATAATACAAAGACAAACACATTTGAGGACAGAAACTAACAAAATAATTGACATGCAGTGGGTACGGACTCTATTTACTCCACTGAAAAAATCGGCATCAGGGAGCTCCATACATCCATATGCTCTTCATCCTCCAGAGCCACTTGCTCATTTTGCTCTTTCCACTGGAGCAATTTCAGATCCACCTGTAAGCAGGATAGATATGCTAAAATTTTGACTGCAAAGTGATCACAATATTCTTACTGTAAAAAGTTCTGCAGGTGAGGCTGTACACTGCCAAGAAAGTGAATCATCAACTGGATCAAGCCAGGACTGAGTTCATTCAAGCTAGTGTCATAGTCAGAAAGCAGACAATCTTCCTACCTAAAGTTCTCCATCATTATGCGAAGGATGCTGCTCTCGAGTTGCCTGACTTGGTTGAGATGGCATGTGAGATCATGCCTGAAGCTCAACAAAAGGAAATCAGACAATGTCTTCGGAGAAGAATAGACAAGTGTGTTGAGTGGATCCCCTTCAAATCATCTTTCAGATATACTATACATAGGAGTTTGGCTGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028998

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028998&oldid=35255"