BGIOSGA029008

From RiceWiki
Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029008, complete gene.| tag = P0700D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029008, complete gene.

LocusTag

P0700D12.119

Ensembl Transcript ID

BGIOSGA029008-TA

Ensembl Protein ID

BGIOSGA029008-PA

Length

3922

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27449732..27453653

Sequence Coding Region

27449732..27449871,27450336..27450439,27450831..27451007,27451498..27453431,27453504..27453653

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27449732..27453653 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27449732..27453653 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGAGGGGGAGGAGAGGCGGCGGTTCTCGAATCTTCGCGGCGTCCGGTGGCGGGTCGATCTCGGCATCCTGCCGGCTTCGCCGGGGGCGTCGGTGGACGAGCACCGCCGCGCCGCCGCCGATTCGCGGAGGAGATATGTTAGTTTGAGACGACGTCTTCTGGTAGACCCTCATGTTCCGAAGGAGGAGGGCAGATCATCAAACCTCATTGTCGACAACCCGCTATCTCAGAACCCTGATAGTAGCTGGGGTCGGTTTTTCAGAGGCGCGGAGTTGGAAAAAACCGTAGATCAAGATTTGTCTCGTTTATATCCTGAAGATGGAAGTTACTTTCAAACGCCTACTTGTCAGGCCATGCTGCGTCGAATACTATTGATGTGGTGCCTTCAGCACCCAGAATATGGATACCGCCAAGGAATGCATGAGCTATTGGCCCCTCTAGTGTATGTTCTTCAAGTTGACATTGACAAACTATCTCAAGTACGAAAATTGCATGAAGATTGCTTCAATGATGATTTTGATGGAGTTCCTTTCCCAGATACCGATATGGTTTTCAGCTATAAACCTAGAAAGGACCCAAAATGGAGTTTTGGAGCTGACAATCAGAATGATTCTGAACGATCTTCCAAAAGTAACACTCTTGATGAGCTTGATCCGGACACAAAAGAAATAATTTTACTTAGTGATGCATATGGCGCGGAAGGCGAACTAGGCATTGTTTTGTCAGAAAGGTTTATGGAACATGATGCCTATTCTATGTTTGATGGTTTGATGGATGGAGGTAGCGGAGTGGTACGCATGGCAGAGTTTTTCTCCCCATCCTCTGTTGGATCTAGCTCAAATCTACCACCTGTTATTGAAGCCTCATCAGCATTATTTCATTTGCTCTCAATTGTTGAGCCAACCCTCCATAATCATTTCATTGAGTTGAAAGTGGAACCACAGTGGTTCGCACTTCGTTGGTTGCGAGTCTTGTTTGGACGAGAATTCTGCCTCAATGATCTTTTGGTAGTATGGGACAAAGTTTTTGCTTGTTCAAACAATATGCTGCTAAGTAGTGATGAGGAATATAACTTTCGTATCTTGTGTTCAGATAGAGGAGCATTTATTGCAGCCATGGCAGTTTCTATGCTTCTTCATATTAGGTCGTCTTTGTTGGCTACTGAACTTGATGTCTTCTGTCTTCAGAGATTATTAAATTTTCCAACGAATATTGATGTGCAGAAGCTAATTGAGAAAGCCAACTCCCTACAGTCTATTGCAATTGATGCGAACACTTCATCCTCATCTTTCCTTTTAAAGAGGGATAGCTATGAGTTTGACAGAGTTCACAGCAATCTCTCTTCTTCAACTCCTCCGAGAACTCCATTGCATCCTGTTTCTGAGAGTTACTGGGAAGAGAAGTGGAGGAATGTGCACAAGGACGGAACAACCCCCAAGGAGGTTGAGAGGGGCAATTCTTTTAGTAAACAATTAAAGAAATCTTTGACCCAGAAGCTTGGTTTATCTAGGACAGAGTCAGATCCTTCTCCAGTGAAGGTCCTCAGTGTGAGTAGTAATGATACTCGGAATTCAGTAAGACGTTGCCTTCTGAATACTTTATCAGATGATTTGGATTGTTCTAATGAACTTGCCGGGAAAACTCAGGAAGACGAATTCCCTATCATCTCAGTTCACAGGGAGCATCCTCTGAGCTCTGCAGAGCCTTCCAAGTTAAAGGCAGCTGGTGAAAATGTAACTGTGAGCGCATCATGTGTGGCAAAACTCAGCCCTCTAAAAAAATCTGTGGTTGAGCCAGCTAATGAGAACGCAACACAGGGGACAAAGTGTGTACCAGAAGCTTGTTCCAGCGGTGAGAACTCTCCAGTGTTCTATGCAGCCAGAGCCAGTGCTGGTAATGAACCTTTGAATGGCCAGGACACGGATTCTGAGAGTAGCAGTGTTACCTCAAATTCCTTTGCTGGTGACCATGATAGGGATGAAATTCTGAAAGATGAGCCATCCAGCTCTAATGATGATAACAAAACCATCCAAGATTCAGAAGCAGCATCTTCTGATAAAAGTCCAGACCGAAATGGAACCTCTGAGAGGGCTGTCGTTTCTAATGAAAGAAAGCCATTCATTAGTAAATTCCAGTGGCTCTTGAAGTTGGGAAGACCTTCGGTTGAAGGCAACATGGAGAAGAGTAGTGGAGAGACATCAGCTGATAAACAAGACGGGGACACATCCTGTTCTCCTTCTGATGGGAATTCAAATAACTCCCGTGGTAGCGTAAAGTTGGCTTCTGGTGATAAAAAGGTCATGGGCAGCCTAAAGAATCTTGGACAAAACATGCTTGAAAATATCCAGGTGATTGAGTCGGCATTTCAGCAAGACCGTGGTCAGCCTGGCCCTGTGGAGAACTTCTCAAACAACATTCTTGGAGGCAAAGGACAGGTCACTGCAATGGCTGCTCTGACGGAGCTTCGCAAGATCAGCAATCTGCTGAGCGAGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MAEEGEERRRFSNLRGVRWRVDLGILPASPGASVDEHRRAAADSRRRYVSLRRRLLVDPHVPKEEGRSSNLIVDNPLSQNPDSSWGRFFRGAELEKTVDQDLSRLYPEDGSYFQTPTCQAMLRRILLMWCLQHPEYGYRQGMHELLAPLVYVLQVDIDKLSQVRKLHEDCFNDDFDGVPFPDTDMVFSYKPRKDPKWSFGADNQNDSERSSKSNTLDELDPDTKEIILLSDAYGAEGELGIVLSERFMEHDAYSMFDGLMDGGSGVVRMAEFFSPSSVGSSSNLPPVIEASSALFHLLSIVEPTLHNHFIELKVEPQWFALRWLRVLFGREFCLNDLLVVWDKVFACSNNMLLSSDEEYNFRILCSDRGAFIAAMAVSMLLHIRSSLLATELDVFCLQRLLNFPTNIDVQKLIEKANSLQSIAIDANTSSSSFLLKRDSYEFDRVHSNLSSSTPPRTPLHPVSESYWEEKWRNVHKDGTTPKEVERGNSFSKQLKKSLTQKLGLSRTESDPSPVKVLSVSSNDTRNSVRRCLLNTLSDDLDCSNELAGKTQEDEFPIISVHREHPLSSAEPSKLKAAGENVTVSASCVAKLSPLKKSVVEPANENATQGTKCVPEACSSGENSPVFYAARASAGNEPLNGQDTDSESSSVTSNSFAGDHDRDEILKDEPSSSNDDNKTIQDSEAASSDKSPDRNGTSERAVVSNERKPFISKFQWLLKLGRPSVEGNMEKSSGETSADKQDGDTSCSPSDGNSNNSRGSVKLASGDKKVMGSLKNLGQNMLENIQVIESAFQQDRGQPGPVENFSNNILGGKGQVTAMAALTELRKISNLLSEM</aaseq>

Gene Sequence

<dnaseqindica>1..140#605..708#1100..1276#1767..3700#3773..3922#ATGGCGGAGGAGGGGGAGGAGAGGCGGCGGTTCTCGAATCTTCGCGGCGTCCGGTGGCGGGTCGATCTCGGCATCCTGCCGGCTTCGCCGGGGGCGTCGGTGGACGAGCACCGCCGCGCCGCCGCCGATTCGCGGAGGAGGTGAGGCTCATGCTGCTTGTGATGCCCCGTGTTTTGCGATTCTGTGCCATGTGCGGTTTGTTCTTGGGTTCGTTGATCTCTGCTTAGTCGATGTTGTTATCGATTCCCCTATTTTTGGTTTGGTTCTTGTGTTTGTGTGGTATAAAAGGTTTTTGTTTTCACTTCCCAGATGGTTTTGATTGGCATGAATTTCTGGCTTGGTTTGAGGAGAAACCATGCAATCGTGATTTGTTTAGTGTCATAACTTAGCATGAAATAATTTGTATGTTGGTAATCTTTTGTTTGTGATGGTGTTGTGTGCACATGGTGATATCTCCATACTTGATTCATGAGATGGAATTGGTGGAGAAATTTCTGCTGACCTTGTCAATTAGACAAATTTGTCATTTTTATATGATTGGAGCATTGGTCCTTCTTATTCCTTTCATCTATATATATTTATTTAACATCTGATTTGTTTGCAGATATGTTAGTTTGAGACGACGTCTTCTGGTAGACCCTCATGTTCCGAAGGAGGAGGGCAGATCATCAAACCTCATTGTCGACAACCCGCTATCTCAGAACCCTGGTATTGATACAAGCATGAATTTATGATGATGAGATGCTAAGCTTAAGATTTGGTCGATGATATGTTAGAATTTAGAACATTTATGCACTTGTTTCCTACCTTCTTATTTGGTGGTGAAAGTCTTCAAATCCTTGCATGATCTATAAAGAGTAAATTCCCATAGATAGTGTGGAGTTATCGTCATAGATCGGGATAATGATGTATTAGAACATGGATGCACTTGTTTCACACCTGCTTATTTAGCTGCGTGAGAATCTTTAAACATCTGCATGATCATTATTCATTAATGCTGATGAACAACCATAAGTTGATGCCCGCTTATCAGCATAGATGTTTATTGCTTAAGTTAATGCTCTATATGTGTTAGTAATTATTCAACATCCCTCTGTAGATAGTAGCTGGGGTCGGTTTTTCAGAGGCGCGGAGTTGGAAAAAACCGTAGATCAAGATTTGTCTCGTTTATATCCTGAAGATGGAAGTTACTTTCAAACGCCTACTTGTCAGGCCATGCTGCGTCGAATACTATTGATGTGGTGCCTTCAGCACCCAGAATATGGATACCGCCAAGGTAAGGAACTCCTTTTGCATATAAAATTTACAATAGTTACTAATTTCTCAATTAGAGTTGATCGAAGTAATCTGATTGGCTCTGCCCTCCCTGTCGCAAATTTGAATGGAGCTGACATCCTTTAATGTCATTTAGCTTAGCTTGTTGTTAGAAGTTCCCACTTATGGGCATGAAAATTGTAATTCTAGAATACATTGTTAGGGCATATTGATAAGCTCTGAGATCCTTTTACAAGTTAATAGGTCCTGAGATCCTTTCACAAGGAAATACATAAAAAAAACGTTCATTTTGTTATAAGGTTTAAACTCTTGAAGTGCTATCCACCTATACCATGTAGTGTTTTCGGTATTGATTTTTTTCTTTTAAAGATGTGGCATTGAAATTCTGATTACTTAGCATGACCCAATTGATTATCATCATCTCTCCAAATTTGTTATGATTTTATTTGATTGGCATATGTGGAAAGACTTATCGACTATTTTTGTCACAGGAATGCATGAGCTATTGGCCCCTCTAGTGTATGTTCTTCAAGTTGACATTGACAAACTATCTCAAGTACGAAAATTGCATGAAGATTGCTTCAATGATGATTTTGATGGAGTTCCTTTCCCAGATACCGATATGGTTTTCAGCTATAAACCTAGAAAGGACCCAAAATGGAGTTTTGGAGCTGACAATCAGAATGATTCTGAACGATCTTCCAAAAGTAACACTCTTGATGAGCTTGATCCGGACACAAAAGAAATAATTTTACTTAGTGATGCATATGGCGCGGAAGGCGAACTAGGCATTGTTTTGTCAGAAAGGTTTATGGAACATGATGCCTATTCTATGTTTGATGGTTTGATGGATGGAGGTAGCGGAGTGGTACGCATGGCAGAGTTTTTCTCCCCATCCTCTGTTGGATCTAGCTCAAATCTACCACCTGTTATTGAAGCCTCATCAGCATTATTTCATTTGCTCTCAATTGTTGAGCCAACCCTCCATAATCATTTCATTGAGTTGAAAGTGGAACCACAGTGGTTCGCACTTCGTTGGTTGCGAGTCTTGTTTGGACGAGAATTCTGCCTCAATGATCTTTTGGTAGTATGGGACAAAGTTTTTGCTTGTTCAAACAATATGCTGCTAAGTAGTGATGAGGAATATAACTTTCGTATCTTGTGTTCAGATAGAGGAGCATTTATTGCAGCCATGGCAGTTTCTATGCTTCTTCATATTAGGTCGTCTTTGTTGGCTACTGAACTTGATGTCTTCTGTCTTCAGAGATTATTAAATTTTCCAACGAATATTGATGTGCAGAAGCTAATTGAGAAAGCCAACTCCCTACAGTCTATTGCAATTGATGCGAACACTTCATCCTCATCTTTCCTTTTAAAGAGGGATAGCTATGAGTTTGACAGAGTTCACAGCAATCTCTCTTCTTCAACTCCTCCGAGAACTCCATTGCATCCTGTTTCTGAGAGTTACTGGGAAGAGAAGTGGAGGAATGTGCACAAGGACGGAACAACCCCCAAGGAGGTTGAGAGGGGCAATTCTTTTAGTAAACAATTAAAGAAATCTTTGACCCAGAAGCTTGGTTTATCTAGGACAGAGTCAGATCCTTCTCCAGTGAAGGTCCTCAGTGTGAGTAGTAATGATACTCGGAATTCAGTAAGACGTTGCCTTCTGAATACTTTATCAGATGATTTGGATTGTTCTAATGAACTTGCCGGGAAAACTCAGGAAGACGAATTCCCTATCATCTCAGTTCACAGGGAGCATCCTCTGAGCTCTGCAGAGCCTTCCAAGTTAAAGGCAGCTGGTGAAAATGTAACTGTGAGCGCATCATGTGTGGCAAAACTCAGCCCTCTAAAAAAATCTGTGGTTGAGCCAGCTAATGAGAACGCAACACAGGGGACAAAGTGTGTACCAGAAGCTTGTTCCAGCGGTGAGAACTCTCCAGTGTTCTATGCAGCCAGAGCCAGTGCTGGTAATGAACCTTTGAATGGCCAGGACACGGATTCTGAGAGTAGCAGTGTTACCTCAAATTCCTTTGCTGGTGACCATGATAGGGATGAAATTCTGAAAGATGAGCCATCCAGCTCTAATGATGATAACAAAACCATCCAAGATTCAGAAGCAGCATCTTCTGATAAAAGTCCAGACCGAAATGGAACCTCTGAGAGGGCTGTCGTTTCTAATGAAAGAAAGCCATTCATTAGTAAATTCCAGTGGCTCTTGAAGTTGGGAAGACCTTCGGTTGAAGGCAACATGGAGAAGAGTAGTGGAGAGACATCAGCTGATAAACAAGACGGGGACACATCCTGTTCTCCTTCTGATGGGAATTCAAATAACTCCCGTGGTAGCGTAAAGTTGGCTTCTGGTGATAAAAAGGTCATGGGCAGCCTAAAGAATCTTGGACAAAACATGCTTGAAAATATCCAGGTACTGTATTCAATATTATTTTTCATGTACTTAAAGTAAGCCTGAATAACCTTGTCTTTACAAAATGATTAGGTGATTGAGTCGGCATTTCAGCAAGACCGTGGTCAGCCTGGCCCTGTGGAGAACTTCTCAAACAACATTCTTGGAGGCAAAGGACAGGTCACTGCAATGGCTGCTCTGACGGAGCTTCGCAAGATCAGCAATCTGCTGAGCGAGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029008