BGIOSGA029052

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Revision as of 08:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029052| Description = cDNA clone:J023063L04, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA029052, complete gene.| ta...")
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Gene Name

BGIOSGA029052

Description

cDNA clone:J023063L04, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA029052, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA029052-TA

Ensembl Protein ID

BGIOSGA029052-PA

Length

4023

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28277371..28281393

Sequence Coding Region

28277371..28277555,28278480..28278558,28278783..28278853,28280036..28280135,28280512..28280553
,28280645..28280686,28280971..28281128,28281321..28281393

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28277371..28281393 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28277371..28281393 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGGGTCGGGTGGAGCTGAAGAGGATCGAGAACAAGATCAACCGGCAGGTGACGTTCGCCAAGCGCAGGAATGGCCTGCTCAAGAAGGCGTACGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCATCTTCTCCAACCGCGGCAAGCTCTACGAGTTCTGCAGCACCCAGAGCATGACTAAAACGCTTGAGAAGTATCAGAAATGCAGTTACGCAGGACCCGAAACAGCTGTCCAAAATAGAGAAAGTGAGCAATTGAAAGCTAGCCGCAATGAATACCTCAAACTGAAGGCAAGGGTTGAAAATTTACAACGGACTCAAAGAAATTTGCTGGGTGAAGATCTTGATTCATTAGGCATAAAAGAGCTCGAGAGCCTAGAGAAGCAGCTTGATTCATCCCTGAAGCACGTCAGAACTACAAGGACAAAACATCTGGTTGACCAACTGACGGAGCTTCAGAGAAAGGAACAAATGGTTTCTGAAGCAAATAGATGCCTTAGGAGAAAACTGGAGGAAAGCAACCATGTTCGCGGGCAGCAAGTGTGGGAGCAGGGCTGCAACTTAATTGGCTATGAACGTCAGCCTGAAGTGCAGCAGCCTCTTCACGGCGGCAATGGGTTCTTCCATCCACTTGATGCTGCTGGTGAACCCACCCTTCAGATTGGGTACCCTGCAGAGCATCATGAGGCGATGAACAGTGCGTGCATGAACACCTACATGCCCCCATGGCTACCATGA</cdnaseq>

Protein Sequence

<aaseq>MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQVWEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGYPAEHHEAMNSACMNTYMPPWLP</aaseq>

Gene Sequence

<dnaseqindica>1..185#1110..1188#1413..1483#2666..2765#3142..3183#3275..3316#3601..3758#3951..4023#ATGGGGAGGGGTCGGGTGGAGCTGAAGAGGATCGAGAACAAGATCAACCGGCAGGTGACGTTCGCCAAGCGCAGGAATGGCCTGCTCAAGAAGGCGTACGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCATCTTCTCCAACCGCGGCAAGCTCTACGAGTTCTGCAGCACCCAGAGGTTCATTTCATTTCCTAGCTACTCTAATCCGTCCATCAAACCCACATCACATCACACTTCAATTTCGCAAGCTTAATTAGCCACCCTTTCGATTGGATCTGTCCTGTCCAGATCTGTTCATGCATCATCAAAAGCTAGCTGCATCGACCTTTTGCCCGGAATTCCAGCTGCATGCTATGCCGGCTTGATTTCTGCATACGATCTTTTGACAAGAAACGAGCTGTGGCGTGTTCAACCGCACGCTACCTAGCTAGCTAGATTGCTCTTGCTTCCGTGGGTTTTCACGCCGGGATAGATCTGGGCAATATCCTGGGTTTAGGGTTTTGCTTCCTGGTCCGTGTGGTAGATCGGTGCACATCTTTAGTTTGCCAGTTGGTTTCCTTCTCCGATCTGTCCGTCTTACGTGCGATTTCTTCATGTGTGGTCTCGGAACTCGCAAAGGAACTGAAAAGTTAGCTTATTTACGACCTTTTCTTCTGGATCTGCAAGGTTCTTTGTTTCCCTTAGCTAAATCCTTAAAAGAAGTAGTCCAATATATACTTCCATGCATAATATTGCAAAATAAATGATGGTTTGTTGATAACCAAAGTAAAGAGACATAAAAACTAACTAGAGACTTTTTTTTTTCAAAAAAAAAAAGAAGAATCTTGTCTACTGTGTTATATATCAGTAGTATATATACAGAGATCAACGGCTTCAGTCTACTAATCAAACAATATAATCTCATAGGGGGACTTGCAAGAACCATATGTTCCATTTCTGAATGTATTTTAAGCTAGAATGCATGACAACGAAAAAAGGGCATTGTGGTAGTAAATGTGCCATGCCCCTATTGTAGATCTTAACCATCGTTAATCTCTCCTTCTTGTGATCCCATGCATGCACTAATTTTAATTAATTCCTCATGTCTTTTGAACTTTGTAGCATGACTAAAACGCTTGAGAAGTATCAGAAATGCAGTTACGCAGGACCCGAAACAGCTGTCCAAAATAGAGAAAGTGAGGTAATTATTAATTGTGTTCATTAATTACACCCATTATTATGCAGCAAACTAATTTTGGTTTGACCACATAAGTGTTTTCTCACATGTAACATTACTTTTCTACTACCATAATAGCATGTGCATATGAAGGAGATGGTTTGCAATTGCAATATGTTATATACATATGTCCTACACATGCATTTTCAAAACATCGAATTAATGGTCAACTATTTTGTTTCTTTCAGCAATTGAAAGCTAGCCGCAATGAATACCTCAAACTGAAGGCAAGGGTTGAAAATTTACAACGGACTCAAAGGCAAGTTATGATGCATTTTCACTGATAAGCTTCTCTCTTGATGATGCTTTTAGGTTTGCATTTAGACGATTTTATGCAAGAGCGGTTTTGTACCACAAAAATATGATTTTCGATGTCATAGCGCTGCAAGAATGATGTGAATAAACTCATAGTATTTCTTTTTATAGTGCTGTCGTTATAAACAAAAAATATATCATGTTAACAGTAATTAAATGTTGATTCCAGCTAATTGCTTGGATGTTATCAGCCTAGAGAACCTTAGGTGGGCATCTTAATTTTAAGGTATAGTAGCACAACTACTAGCTATTATAGGCGGGCTATCAATAGGTGGAATAATAAAAACAAAGCACAAGCAGTGTACCATATACTCCCTCCGTCTCATAAAAAAACCAATCTAGTACTGGATGTGGCATATCCTAGTACTACAAATCTAAACATAGGTTGTGTTTAGTTCGGTCCAAAGTTTGGAATTTGGTTAAAATTAGAGACGATGTGACTGAAAAGTTGTGTGTATGAAAGGTTTGATGTGATGGAAAGTTGGAAGTTTGGAAAAAAACTTTGGAACTAAACACACCAATACCTTTGTTCAGATTCATTATACTAAAATGTGTCACATCTGATCCTAGATTCGTTTTTTTGGGACGGAGGGAGAAAGTCACAAGCTCAGAGAATAAATCAATCATACAACTAGTATAAAGCATCTCAAATCTATTTTGTTTTATCAAAATCTAGTTGAGGACACACATATATACAATCCAGGTTCTTATAGCATTCTCACCATTAATTAATTAACCAATAGATCAAGAAATCAACTGTACTACTCAAAATTAGACAGGCAGCTGTCGACCAGCTGATAAGATCTATATATAACATGATGTATATACATGTCATTGGTAAAAAAAAAATCACATACATGCATGTCATAGTAGTACTACTCGCAGGTCGTAGTTCCAACATGCAACTGCATAATGAAGAAGTACATAGTATTGAGTATTAGCTTAGCTGTTACACATGTAATAATACATCATTTTGAAACACACGCTGTAAGTTAAATTTTATTTGGAAACATTAGTAGTTAATTAACTTCATTTTTGTACTTCAATATAGTAATTGAAAGTGGAAGTCTAATTTTCATATGTACATAACTAATACTCTTCTACCCCTATGTGTGGACTATGACAGAAATTTGCTGGGTGAAGATCTTGATTCATTAGGCATAAAAGAGCTCGAGAGCCTAGAGAAGCAGCTTGATTCATCCCTGAAGCACGTCAGAACTACAAGGGTAATGATTGTTTTTGGGTGCTAGATCACAAACAAGTACCATGCATGCATGCATGTACTCCCTCCGTGAAAAAAAAAATTCCAATCCTAATTATGACAGTGTGTACACGTGTATCTAAGTTTCTAGCTAGAATTGTGTTTTGTATTGGACGAAGGGTGTAGTTGTGTAGCACTAGATTTTGAAGTAACACAAAGGAGTACATACACACCATATATGTTGCATGCAGATGCAATTGACTTAAATGCAGCCCTATTGTTGATCGTGTGGATAGCTACCTCACGCAATTATTAATTTCCTGCGTAAAATTTATAGGAACCCATGCATGAAAGATCTGAATTGTAAATCTTACTTGTCAATGCTTTTAATCCTCTTGTAGACAAAACATCTGGTTGACCAACTGACGGAGCTTCAGAGAAAGGTATATTTTTAAGAATTATCAATAAAAAGTGTTGATCACATTTTTCTTCCTTAGCAGTAGTAGATATTGACCCTGTTTACTTAATTTACAGGAACAAATGGTTTCTGAAGCAAATAGATGCCTTAGGAGAAAAGTAAGTTATACAACTCTTCCATCTTTCTCCTTAGGAGAAAAGCAAGTTATACAACTCTTCCATCTAAAGAAAGGTTTATTCAACTAATCATTCATGACCAAGAATCTTAAGATAAACCTCAACTGAACTATGGTGTGTTTCCTATATATATGAATTATGGAGTATATAGTCCATGATCAATATAATGCAGATATCATGGAATGGAAGCCCTGATTAATGTAGTGAAAGGGATATTGAAAATAACTGCAATGTGATATCATTTAAATTGTTTTGAAAAACTGTAGCTGGAGGAAAGCAACCATGTTCGCGGGCAGCAAGTGTGGGAGCAGGGCTGCAACTTAATTGGCTATGAACGTCAGCCTGAAGTGCAGCAGCCTCTTCACGGCGGCAATGGGTTCTTCCATCCACTTGATGCTGCTGGTGAACCCACCCTTCAGATTGGGTATGCTCATATGATCTCTTCCTATATATACTTGGAACCAATTGCCGGTCTATATATATAATCTGATCCAGGACAATATAGCTAGCTAGTTTTTGTATATGCACACTTAATATTGTATAGATCTTTAAATAATGGCTATATTTTTTGCTTATATATGCCTCTGAAAGTCTGAATGTGATACCTGTTTTGCAGGTACCCTGCAGAGCATCATGAGGCGATGAACAGTGCGTGCATGAACACCTACATGCCCCCATGGCTACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029052