Os11g0172133

From RiceWiki
Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0172133| Description = Protein kinase-like domain containing protein| Version = NM_001189446.1 GI:297728022 GeneID:9270785| Length = 4276 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0172133

Description

Protein kinase-like domain containing protein

Version

NM_001189446.1 GI:297728022 GeneID:9270785

Length

4276 bp

Definition

Oryza sativa Japonica Group Os11g0172133, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3518616..3522891

Sequence Coding Region

3519940..3522610,3522700..3522891

Expression

GEO Profiles:Os11g0172133

Genome Context

<gbrowseImage1> name=NC_008404:3518616..3522891 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3518616..3522891 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggttattacaactggaaagattatcttgattttcttagcttgcactgcacatgtcgtcacctgcagttccttatatggaaacgagacagatcgagtggcactgcttgaattcaagcaggcagtctgtcttgatccaaaacaaaccttgatgtcctggaatgacagcatccacttttgcaattgggaaggcatcttgtgcagcttgaggattccatatcgtgtcacttctcttaatcttacaaatcgaggtttagtagggcaaatctctccttcacttggaaacctcacatttctatcaattctatcccttacagagaattcattcagtggacaaatccctgcatcccttggccacttgaaccacctccaaactctctggttgagtaacaacactctgcaaggagttataccagattttacaaattgttccagtatgaaggctctacggctgaatggcaataatctagttggaaaatttccgcagctgcctcatcgccttcaaagtctgcaactttcatacaatcatcttagtggaaccattcctgcttctcttgctaatatcacaaggctaaatgtgcttacctgcacatataataacatccagggcgatatcccacatgagatcggaaagttatccagcctgcaattcttgtatgtaggtgcaaataagttggttggcaggtttccacaagccatcttaaacctttctactcttattggtcttagccttgggtttaataatctaactggagaggcaccatccaatcttggtaattgtctacccaaccttcagctacttgaattagaagacaactgctttcaagggcaaatcccctcttcgttgataaatgcttccaagctatatcgtcttgagctagcaagcaataacttcaccggtgtggtgcctagatccattggcaaactaaccaagctatcttggttaaatcttcagtccaataaacttcaagctcgtaacaagcaagattgggagtttcttgacagcttagccaactgcactgagctgaaagctttctcgatagctagtaatcatctagaaggacatgtgccaacttcattaggtaacctttctgttcagcttgtacaattgtttttgagtggaaatcaattatcaggtggttttccttctggcatagcaaaccttccaaacctgatttatattggactggacaacaaccagtttactggtgcagtcccaaaatggcttggaactctcagtaatttacaacagatattgttacatgagaacatgtttactgggtttattccaacatccctttcaaatttatctgtactgggatctctctggctagactataacaaaattggaggacctttaccagcaagcttgggaaacctgcaaacgcttgaaacattgagcatttcaaacaacaaactccatggtagtgtaccaatggagatcttcagaatcccaacaatacggttaattgatttgtctttcaacaactttgatgggcagcttagtgccagggtaggaaatgctaagcaactcatgtatttatatctttcatccaacaatttatctggagatattcctagttcactgggcaattgtgaaagtttggaaggcatcaaattgggctcgaatattcttagtggaagcattcctacttcattaggcaacataagaagtctgaaagttctcaacttgtctcacaataacttaagtggatcaatacatgctaatcttggaaagttatggctccttgaacaagtagatttgtcatttaacaatctcagcggtgagataccaacagaaggaatattcttgaatgcaactgcagtgcacatcaatggaaatgagggtctttgtggcggggcactcaatttacacctacccacatgttatgtcatgcctttgaattcatctaggagtgaacgatctattttgctgtatttggtgatattatttgctagcctggtgtcagttatattcatatatctattattgctctggaggggaaaacagaagaaaaaatgtacatctttgaccccatttgatagcaaatttcccaaagtttcttacaatgatctcgccaaggcaactgaagggttttcagcatctaatataattggaagaggaatatacagtcatgtttacaaaggggaattgttccaaggcagagatgtggttgctgttaaagttttcagcctggagacagaaggagcagaacatagttttatcacggaatgcaatgctttgagaaaagtgcggcatcgcaatctagttcctatcttaactgtgtgctcaagtctggatactaagggaaatgatttcagagccctggtgtataagttaattccacaaggagacttgtattctctactgcactcaactagagatagtgagaatggtttcacttcgaacatcattacattttctcaaaggctaagcattgttgtggacatagcagatgcattggaatatcttcaccataacaaccaagaaactgttgttcattgtgacataaagcctagcaatattcttctggacaatgatatgaaagcttatgttggagatttcggtcttgcgaggctcaaagctgatgctgcagtaccatctgtcggtgactcaaactcaacttctatgattgcaataaaaggaaccattggatatgttgctcctgagtatgcatctggtggtcaagtttcaactgctgcggatgtttatagctttggaattgttctccttgaagtattcttacggaagggaccgacagatgatatgttcaaggatggtctggatattgcaaaattcgttagtatgaactttcctgacaagatactagatattgttgaccctgtattactacaagacg</cdnaseq>

Protein Sequence

<aaseq>MMVITTGKIILIFLACTAHVVTCSSLYGNETDRVALLEFKQAVC LDPKQTLMSWNDSIHFCNWEGILCSLRIPYRVTSLNLTNRGLVGQISPSLGNLTFLSI LSLTENSFSGQIPASLGHLNHLQTLWLSNNTLQGVIPDFTNCSSMKALRLNGNNLVGK FPQLPHRLQSLQLSYNHLSGTIPASLANITRLNVLTCTYNNIQGDIPHEIGKLSSLQF LYVGANKLVGRFPQAILNLSTLIGLSLGFNNLTGEAPSNLGNCLPNLQLLELEDNCFQ GQIPSSLINASKLYRLELASNNFTGVVPRSIGKLTKLSWLNLQSNKLQARNKQDWEFL DSLANCTELKAFSIASNHLEGHVPTSLGNLSVQLVQLFLSGNQLSGGFPSGIANLPNL IYIGLDNNQFTGAVPKWLGTLSNLQQILLHENMFTGFIPTSLSNLSVLGSLWLDYNKI GGPLPASLGNLQTLETLSISNNKLHGSVPMEIFRIPTIRLIDLSFNNFDGQLSARVGN AKQLMYLYLSSNNLSGDIPSSLGNCESLEGIKLGSNILSGSIPTSLGNIRSLKVLNLS HNNLSGSIHANLGKLWLLEQVDLSFNNLSGEIPTEGIFLNATAVHINGNEGLCGGALN LHLPTCYVMPLNSSRSERSILLYLVILFASLVSVIFIYLLLLWRGKQKKKCTSLTPFD SKFPKVSYNDLAKATEGFSASNIIGRGIYSHVYKGELFQGRDVVAVKVFSLETEGAEH SFITECNALRKVRHRNLVPILTVCSSLDTKGNDFRALVYKLIPQGDLYSLLHSTRDSE NGFTSNIITFSQRLSIVVDIADALEYLHHNNQETVVHCDIKPSNILLDNDMKAYVGDF GLARLKADAAVPSVGDSNSTSMIAIKGTIGYVAPEYASGGQVSTAADVYSFGIVLLEV FLRKGPTDDMFKDGLDIAKFVSMNFPDKILDIVDPVLLQD</aaseq>

Gene Sequence

<dnaseqindica>1325..3995#4085..4276#gtgtgacacgtcactctcgttccggctcggccagtcgccgacggccaacctcgcctcccagtcgctcaccgccgctcgcttcccggcggctcaggcgggcgcggcgatttcgctttactccatataacgccgctgcgggccggcggccgcgggcgtcggccatgtccccgcatggggctatgggcgtagcggcggctgggacgccgctgaaggcggaggagatggccggcgggtgtactggatggatctccgtcggcccgtcggcgacaggatggaacggcgaggtgaggtccaaccgcccaaattttctcttctttttttactttgtcttcaaatctatattgagagcacttactgtttctgcgatttgcattcagtgtccatcttggagctacccttagaaattttgggataagttgcttgattcatgaggttatgcgatttacaagagcatataatgcagttgttttctgttgtgcatctgcatcctagtctaaattaatataattgacatggtttgcctttttcttttttgaaagaaaaagaaggataatagaattcagaatagacatttgtgtgcactgtgcagaatttggcagcaaattgttcagctggaatcaattattgcaaatgggggtcattcagccgcaaagccgacttgtttgaatggccagatgcagcgaaagtctctgacagagacaaagaacatgcaagcaatgaagtccaccgagaaccaaggactgtagtagaagtagcaaagtctctgaagaagaaaatgttagaacttagtccatgaatcacggaagacaagttgagtttgctaaccgagcatcagatgattggcacgcctataaatcagagaatacggtgcagtagcatacagtctgtcagagctttgctactagatgacttcaaaatcaggctgccgatctgtaagcatttccttgtttagttcattcctttccattgttcagaattgagatatcttttcattaaagaagataagtattgaaaactataaacttataaagatggcactaagccaagaatccagtttagaattggttccctgacagtggcttgtcactctagtatatatttgatcagaaaccgcttgtgttttggaattgattagaccaggaaaatagctgctaattctatgcgttgtctgataaatgatccatctgtgctaaaactgtagggatcagaagcgaacttgaagtgaactgagtggcagctacatcagtccagattcaagacagagttccattccttctgtctggccacatgatccagatctacatttgaacatagctagtcaataatgatggttattacaactggaaagattatcttgattttcttagcttgcactgcacatgtcgtcacctgcagttccttatatggaaacgagacagatcgagtggcactgcttgaattcaagcaggcagtctgtcttgatccaaaacaaaccttgatgtcctggaatgacagcatccacttttgcaattgggaaggcatcttgtgcagcttgaggattccatatcgtgtcacttctcttaatcttacaaatcgaggtttagtagggcaaatctctccttcacttggaaacctcacatttctatcaattctatcccttacagagaattcattcagtggacaaatccctgcatcccttggccacttgaaccacctccaaactctctggttgagtaacaacactctgcaaggagttataccagattttacaaattgttccagtatgaaggctctacggctgaatggcaataatctagttggaaaatttccgcagctgcctcatcgccttcaaagtctgcaactttcatacaatcatcttagtggaaccattcctgcttctcttgctaatatcacaaggctaaatgtgcttacctgcacatataataacatccagggcgatatcccacatgagatcggaaagttatccagcctgcaattcttgtatgtaggtgcaaataagttggttggcaggtttccacaagccatcttaaacctttctactcttattggtcttagccttgggtttaataatctaactggagaggcaccatccaatcttggtaattgtctacccaaccttcagctacttgaattagaagacaactgctttcaagggcaaatcccctcttcgttgataaatgcttccaagctatatcgtcttgagctagcaagcaataacttcaccggtgtggtgcctagatccattggcaaactaaccaagctatcttggttaaatcttcagtccaataaacttcaagctcgtaacaagcaagattgggagtttcttgacagcttagccaactgcactgagctgaaagctttctcgatagctagtaatcatctagaaggacatgtgccaacttcattaggtaacctttctgttcagcttgtacaattgtttttgagtggaaatcaattatcaggtggttttccttctggcatagcaaaccttccaaacctgatttatattggactggacaacaaccagtttactggtgcagtcccaaaatggcttggaactctcagtaatttacaacagatattgttacatgagaacatgtttactgggtttattccaacatccctttcaaatttatctgtactgggatctctctggctagactataacaaaattggaggacctttaccagcaagcttgggaaacctgcaaacgcttgaaacattgagcatttcaaacaacaaactccatggtagtgtaccaatggagatcttcagaatcccaacaatacggttaattgatttgtctttcaacaactttgatgggcagcttagtgccagggtaggaaatgctaagcaactcatgtatttatatctttcatccaacaatttatctggagatattcctagttcactgggcaattgtgaaagtttggaaggcatcaaattgggctcgaatattcttagtggaagcattcctacttcattaggcaacataagaagtctgaaagttctcaacttgtctcacaataacttaagtggatcaatacatgctaatcttggaaagttatggctccttgaacaagtagatttgtcatttaacaatctcagcggtgagataccaacagaaggaatattcttgaatgcaactgcagtgcacatcaatggaaatgagggtctttgtggcggggcactcaatttacacctacccacatgttatgtcatgcctttgaattcatctaggagtgaacgatctattttgctgtatttggtgatattatttgctagcctggtgtcagttatattcatatatctattattgctctggaggggaaaacagaagaaaaaatgtacatctttgaccccatttgatagcaaatttcccaaagtttcttacaatgatctcgccaaggcaactgaagggttttcagcatctaatataattggaagaggaatatacagtcatgtttacaaaggggaattgttccaaggcagagatgtggttgctgttaaagttttcagcctggagacagaaggagcagaacatagttttatcacggaatgcaatgctttgagaaaagtgcggcatcgcaatctagttcctatcttaactgtgtgctcaagtctggatactaagggaaatgatttcagagccctggtgtataagttaattccacaaggagacttgtattctctactgcactcaactagagatagtgagaatggtttcacttcgaacatcattacattttctcaaaggctaagcattgttgtggacatagcagatgcattggaatatcttcaccataacaaccaagaaactgttgttcattgtgacataaagcctagcaatattcttctggacaatgatatgaaagcttatgttggagatttcggtcttgcgaggctcaaagctgatgctgcagtaccatctgtcggtgactcaaactcaacttctatgattgcaataaaaggaaccattggatatgttgctcctggtattatttcctgtttttcaatttaacttgagaattttttgtgcttctaccaacatttggactaagttatccttgattgatgtctacagagtatgcatctggtggtcaagtttcaactgctgcggatgtttatagctttggaattgttctccttgaagtattcttacggaagggaccgacagatgatatgttcaaggatggtctggatattgcaaaattcgttagtatgaactttcctgacaagatactagatattgttgaccctgtattactacaagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0172133, RefSeq:Os11g0172133