BGIOSGA029064

From RiceWiki
Revision as of 08:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029064| Description = (Rice Genome Annotation Project) pyruvate| Definition = Oryza sativa Indica Group BGIOSGA029064, complete gene.| tag ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029064

Description

(Rice Genome Annotation Project) pyruvate

Definition

Oryza sativa Indica Group BGIOSGA029064, complete gene.

LocusTag

OSJNBA0033D24.29

Ensembl Transcript ID

BGIOSGA029064-TA

Ensembl Protein ID

BGIOSGA029064-PA

Length

4785

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28482645..28487429

Sequence Coding Region

28482645..28482683,28482831..28482911,28483747..28483854,28483961..28484023,28484125..28484211
,28484674..28484799,28485161..28485294,28485370..28485442,28485562..28485627
,28486657..28486695,28486809..28486933,28487022..28487136,28487361..28487429

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28482645..28487429 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28482645..28487429 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGGCGTCGCGAGGAGGCGCCTCGGATCCGGATGCGCGCTGGGGCAACTCATGCAGGCGCTCCGACCGGCCGCCGCCGCCGCCGCGGCGAGGACCTACTCCGCCGCCGCCAAGGAGATGACTGTGCGTGAAGCATTGAATTCTGCCCTTGATGAGGAGATGTCTGCTGACCCTTCTGTTTTCTTGATGGGAGAAGAGGTTGGAGAATACCAAGGGGCATATAAGATATCGAAGGGTTTGTTAGACAAATATGGCCCTGATAGGGTTCTTGACACACCAATCACAGAGGCTGGTTTTACTGGAATTGGTGTTGGTGCTGCCTATCAAGGTCTTCGCCCTGTGGTTGAGTTCATGACATTTAACTTCTCTATGCAGGCAATTGATCACATCATAAATTCAGCTGCCAAGTCGAACTACATGTCAGCTGGTCAGATAAACGTTCCTATTGTTTTTAGAGGACCAAACGGTGCTGCTGCTGGTGTTGGTGCTCAGCACTCTCAGTGTTATGCAGCTTGGTATGCGCATGTACCAGGATTGAAGGTCCTAACTCCTTATTCTGCAGAAGATGCTCGGGGCTTGCTAAAAGCAGCAATCAGGGATCCAGACCCTGTTGTTTTCTTGGAAAATGAACTGCTCTATGGTGAATCATTCCCTGTTTCTGCGGAAGTTCTTGATTCTAGCTTCTGTCTTCCGATTGGGAAGGCTAAGATAGAGCAAGAAGGAAAAGATGTTACAATTACCGCATTCTCCAAGATGGTCGGATATGCTCTTCAGGCTGCAGAGATACTTTCCAAGGAGGGAATCAGTGCTGAGGTGATCAATCTTCGGTCAATTAGGCCATTGGATAGAGCTACTATCAATGCATCAGTTAGGAAAACCAACAGATTGGTAACCCTTGAAGAAGGATTTCCACAACATGGGGTTGGCGCTGAAATATGCATGTCTGTTGTAGAGGACAGCTTTGAATATCTTGATGCGCCAGTTGAGAGGATTGCTGGAGCTGATGTGCCCATGCCCTACGCTGCCAACCTTGAGAGGATGGCTGTTCCACAGGTTGAGGACATTGTTCGTGCAGCGAAGCGAGCCTGCTACAGAGCAGTACCAATGGCAGCAACAGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MLGVARRRLGSGCALGQLMQALRPAAAAAAARTYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGFTGIGVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEQEGKDVTITAFSKMVGYALQAAEILSKEGISAEVINLRSIRPLDRATINASVRKTNRLVTLEEGFPQHGVGAEICMSVVEDSFEYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRAVPMAATA</aaseq>

Gene Sequence

<dnaseqindica>1..39#187..267#1103..1210#1317..1379#1481..1567#2030..2155#2517..2650#2726..2798#2918..2983#4013..4051#4165..4289#4378..4492#4717..4785#ATGCTGGGCGTCGCGAGGAGGCGCCTCGGATCCGGATGCGTACGGCTCCTCCTCCCCTCTCCTCTTCTCTCATCCCGATGATTGTTTGTTTTTTTTGTAATCTCTTCTCGTTTTCGCGGTTTCTGATTATCTGGGGGTGGGGGATGGATTTCTGACGCTCGCCGTCCCGTTTCGATCGTTGTGCAGGCGCTGGGGCAACTCATGCAGGCGCTCCGACCGGCCGCCGCCGCCGCCGCGGCGAGGACCTACTCCGCCGCCGCCAAGGAGGTGAGCCGCTTCGATGAACCCTTGCTTCTACCTCCGCTCCTGTATCCTTGGGCCCGTTGCAGCGGCGATGGCATCGGAAAGCGAGCCGCGAGCGTCGACTCTCGTTGTTGTTTTTTTTCTTCTTCTTTTCCTGTGGAATTGGTTGGTACTAGCTTCCGGAGATGCTTGCATCTGTTCGTTGCAGGAGCGTATTGTCATGCGGATTAACTGATTTAGGCGCGTTGATTGTGAATTCGTGTCATTGTGTGATACCACCTAGCTTTGGTTTCTAGCGGGGTTCGTTTCTGGGGGAATATTCGGTCTGTCACGAGAATCAGTTTGTTTTTCCCATGAGGATGCTGTCTCTATGCGCCCCAAACTTCATGTTCATGCGTGATTTTCAGCTCGATAGGTTCAATGCCTACGCGTGGTTGGGTGAGCTGCTGTTTTCATCACATTTAGTTGCAGCTTTGTGGTGCTGAAAACTGTTACATTTGCACGTAAGTACATTAGCGTCCCTGCTCCTGTTGAAAATGAAGGTGGCTTATCAATTTGATGTCCGTTCTGTTGAAAATGAAGGTAGCTTATCAATTTGATGTCCGGCCTTGGGTTCAGTCTGTTAAGATTATATAGTTTCACGCAGCACACACACACACACACACACACAAAGAGAAACTGTTTTATAGCATTTGACTTTTCTTTGGGGGATGGAGACTTTTTTTCCTGCTCCTGAAAGTCTAAACATAGTTTAAAATATACACGTGATTCTTGAATACATAGACATGACGTTCTCTTGAGTACAGTTCTCCGTTCTACATACCGTGAGATTTGACTTGCAACTTTTCTTGCTCATCAGATGACTGTGCGTGAAGCATTGAATTCTGCCCTTGATGAGGAGATGTCTGCTGACCCTTCTGTTTTCTTGATGGGAGAAGAGGTTGGAGAATACCAAGGGGCATATAAGGTGAGTAATTTTTATTAGACCAATGCTGTCTTTGGCCCATTATCATGACATAATTAATTTCTGAATACTAAATAGTAAAGCTTCTCTTTCCTGCAACATTTTGCAGATATCGAAGGGTTTGTTAGACAAATATGGCCCTGATAGGGTTCTTGACACACCAATCACAGAGGTGATACTCTTAAACCTTCTGAGTGACCGCTGGTGTCCACTCATAAGCAGCTAGAGTGACGCAGTCACATTGAAGTACTGATATGTTTGCATTCTGTTCAGGCTGGTTTTACTGGAATTGGTGTTGGTGCTGCCTATCAAGGTCTTCGCCCTGTGGTTGAGTTCATGACATTTAACTTCTCTATGCAGGTCAATCATTCACTATTCTCACTTAAATTTATATGTTTGATTTCAGAATGTGCCTTTTCCTTTGTTTTTAAGCAGATTATTTGGTTCTGCACACTTAGAAAGGTTAATTTTAGAGTATACTATACAGAAGAACCTGATTTCTACAGCATAATTTTTCTTTTTTTGTGAGTACAAAATTGGTTAATGGCTATCACTGAAATTTTTTTATGATGAAATGAACCATTGATAGTTATAAATACGGGTGATAAATAGATATGATTATATGTCCGCTCGAGTAGCTTTTTGATGAAATTCTTCTCCACCTGCTACTCTGCCAGTACTTTGGATTGTCTTTGTCTTGCACATACCTTTATGCATAAGCATTCACTTCCATGCATATCTGGATCTTTTATACAAATATATTTTCCCATCTATATGATGTAAAGATTAAAATAGTTTCTATAACACCATTTTCATATTCAGGCAATTGATCACATCATAAATTCAGCTGCCAAGTCGAACTACATGTCAGCTGGTCAGATAAACGTTCCTATTGTTTTTAGAGGACCAAACGGTGCTGCTGCTGGTGTTGGTGCTCAGCACTCTCAGGTTTGTGACAGAAACTTGTTAATGCCTATCTGTTATTCTATTCTATTATTATTGTTTGGACGGCAAATAACCAATATTTGTGGTGTTTTGAACATTTTGCATTGTTTGTAAATAGAGTAAATTTCACAAAACTATTATTATGCATTCTATTATTCACAGTGAAGTTAAAAGTGAAGAATGAGATTATTTGTTACATGAGTTGTTTATCCTGCTATAATTATTTATAAAAATGCGTTGAACTAAGTACTTAGTGTGATTGTGTAAGCTTTAGTTTATTTCTTCTCTTTTCATTCCTTAGCTTTGATTCAAACTCCTCTTGTCATTTATTTTGGTGGAATTAACTAAGTGCCTTGGTATGCAGTGTTATGCAGCTTGGTATGCGCATGTACCAGGATTGAAGGTCCTAACTCCTTATTCTGCAGAAGATGCTCGGGGCTTGCTAAAAGCAGCAATCAGGGATCCAGACCCTGTTGTTTTCTTGGAAAATGAACTGCTGTATGCTAGCCTTTCCTTCCCAATTATATTCTCTAAATTTGATTTGCCATTTCACTGAATAGTGTATTTCTGCAGCTATGGTGAATCATTCCCTGTTTCTGCGGAAGTTCTTGATTCTAGCTTCTGTCTTCCGATTGGGAAGGCTAAGGTATGCTGTATAGTTGTATTGATTTCGTAGTAGGATGAGTTTTATTTGGTCAGGTTTCGGTTTCTGGTTTGCCTGGAAGAGTTTATTTCTGATGGCTGCTTTCATTTTTCTATGTGTAGATAGAGCAAGAAGGAAAAGATGTTACAATTACCGCATTCTCCAAGATGGTCGGATATGCTCTTCAGGTGTGTGGATACCAGATTTTCTTAAGCTGAAGAATTATGTCTAATAACGGTGTCTCTAGTGACACTGGTTTCCATCAGTAATTCAGGTCTTATACCTGTTGGTAAAGACCGGACCCTTTATTTATTCATTCCATTTTTTTCTACAAAATAAAAAGGCTGGACAATGTACATAGCATCTAGGGATGCAAGCAGGGTGGGCTTGTGGGCTTTGAGGCCCACTAATCCACAGTTGCAGCTATATTTTTGCATCCATTTTTGTTCTAGTGGGTGGAAAATGAATTGCACGTGGGCTCTTATGCGGCACAGCGGGCTGCCGGCTTGCACCCCTAATAGAATCACATCTATATATAGTAGTGAATGCAAAATGATTTCAAAGCACCTCATTGTCAACTTAGGCAAAAAAAAAAAGACCATCAGATTGAGAGAAAAAAAAGACAAAACATGGACAATAAATGTGAACTGTCTGACCAAGGATGTTAGAGAGCCACAAATGAAGGAGAAGGATGGTAAGAGGAGATACAACAAATGAATAGGTAGATGAGGAAGAAGGCTCCAGGCTTCTTAGAGTCACTAGCTCAACACTGCATTATCAACAGTCAACATTGTACCAAATACCAGCCATAAATGGGCCTCTTGTTTGGGCTGGAATTTGTATGGGAGCTCTCATTTACACATGCCTTATCTTGACAAATGGGACAGTGGAAGGTTGGGACAAGTTGGTTTTAGTTGTTTCACTACATAAACCAAATAGGCACATACATTAGTGGTTCTAACAGCCTGGTCAAGGTTATGCGAATGCGCGACTCCACTAGTTAGTGGAATTGAGAGTATCTGTAATATGACCCGTTCCCTTTTTCAATGCTTGCTTGATTCTGATGCAGACTTGGCAAACATACACTTGGATATGCATTATTTTGAGATAGTTCACTGTTTGTTTGTTTAAGTAGCATTTCATTTTTAATACTATATGTACAATATATGATCGATGGTTCTTGCCTGGGTATGTTCTCATGTTCAGTCAAATTTCAGGCTGCAGAGATACTTTCCAAGGAGGGAATCAGTGCTGAGGTAGTTTCCTTTTGCAAAATATACTGTACAGTATAGATATGCAACTAGACATCTATTTTTAACAACATGCCATCACTGTTTTCTTATTACTATATATCAATATCTTTTATCAGGTGATCAATCTTCGGTCAATTAGGCCATTGGATAGAGCTACTATCAATGCATCAGTTAGGAAAACCAACAGATTGGTAACCCTTGAAGAAGGATTTCCACAACATGGGGTTGGCGCTGAAATATGGTCCATCTCTCTCTCTCTCTCTCTCGCTCTCCCTCTCCCTCGCTCTCTGTGACAAGTTGTTCTCATATGTACTGTATCTTCTTTGCAGCATGTCTGTTGTAGAGGACAGCTTTGAATATCTTGATGCGCCAGTTGAGAGGATTGCTGGAGCTGATGTGCCCATGCCCTACGCTGCCAACCTTGAGAGGATGGCTGTTCCACAGGTACTTACGGCTGCTGCTTTGTTTGAACAAGAACTTTAGGGATTCCATCTCGTTATGCCAAGTTCAGCAACTGTTGCTATTCCACCATAACGACCTAGCCGGCTACAGTAATCATCCTACCATACAGATTCCTTCAGTCATATCAAAACTTTAAAAATATAGTAGGAATGTGATCGATTCATTTATTTTCTCCCCTTACTCATGTTGGTGCCCCACATTTGCAGGTTGAGGACATTGTTCGTGCAGCGAAGCGAGCCTGCTACAGAGCAGTACCAATGGCAGCAACAGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029064