BGIOSGA029072

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Revision as of 08:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029072, complete gene.| tag = P0665C0...")
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Gene Name

BGIOSGA029072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029072, complete gene.

LocusTag

P0665C04.32

Ensembl Transcript ID

BGIOSGA029072-TA

Ensembl Protein ID

BGIOSGA029072-PA

Length

3745

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28629735..28633479

Sequence Coding Region

28629735..28630127,28630719..28631101,28631211..28631328,28631512..28631706,28631832..28632056
,28632287..28632346,28632470..28632550,28632656..28633061,28633244..28633479

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28629735..28633479 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28629735..28633479 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCTCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTTCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGTGAGAAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAGAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACCTAGCAAATCAGAAGAGGAACAACTGAATGTCTTCCGGTTCCCTCCTATTGTTGCTCCTATCAAATGCACTGTGTTCCCCCTGGTGAAGAATCAGGAGTTTGACGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTGCCATTTCTATTGGGAGGAGGTATGCAAGGACAGATGAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MASSTTTSEDALRRALAERQAAVDAQAEAVRALKAAGAAAAKAEVDAAVEALKALKVEAGAAARRLQAAVGASGGGGGAAREEMRQAVVNTLERKLFYIPSFKIYRGVAGLYDYGPPGCAVKANVLAFWRQHFVLEENMLEVDCPCVTPEVVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDHCKEKLEKDLTLSPEKAAELKHVLAVLDDLSADELGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPTGLNVGYMRPETAQGIFVNFKDLYYYNGQKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFVDVADLEFLMFPRELQLSGESAKLVKLGEAVSKGTVNNETLGYFIGRVYLFLTRLGIDKNRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSDKSGVPLVAHEKFSKPREVEKLVIVPSKKDLGLAFKGNQKMVVEALEAMSEKEAMDMKAALESKGETNFQVCTLGKDVVITKKMVSISMEKKLEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYTRPSKSEEEQLNVFRFPPIVAPIKCTVFPLVKNQEFDDAAKVIDKALTTAGISHIIDTTAISIGRRYARTDEIGVPFAVTVDSATSVTIRERDSKEQIRVGIDEVASVVKQLTDGQSTWADVSFKYPSHIGPQGDQE</aaseq>

Gene Sequence

<dnaseqindica>1..393#985..1367#1477..1594#1778..1972#2098..2322#2553..2612#2736..2816#2922..3327#3510..3745#ATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCTCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGGTCAGGCCGCGAGCGGAGCCATCTCACAAATATGACCTGTTGTTGTTCACGCTTGTTCAGTTCATTCGTTGGGGATTAAATGTATCCGAAGTTTGTTTAGATTAATTAGATAGTACTCCGTAGCACCAATCTAGTTTGAAATATTTCGTTGTGATAAAATCATAAAAATGTAACTTATGCCAGTGAATGTGTACTAACTTATTCACTTAATCTCACAAACATGACTTGTTGTTCATGCTTGTTCAGTTCATTCGTTGAGGGTTAAATGTGTCTGCTCTTACAGCTCAATTGACGTGTTCAGGTTTGTTTAGATTAACTAGAGAGTACTCCGTAGCACTGATCTAGTCCGATATATTTCGTTCTGATAAAAATGCAACTTATGCCAGTGAATGTGCACTACCAATAGGAGATTGTGACCTGAAAGTAGAATTATTTAGTTAACCATGTGACACTGTGTTCTTGATTGCTATGTTTTGCAAGAATAGCTTTTATATGTTTGAAATTGCTTGTGTATTTGATAACTTTTTATTTTGATTTTACTTATGTTGGGTACTAAGATTTTAGTCACCAAATTCATTCTTTTCTTTTCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTAAGAATATCAATGTTCACTTTTTTTAACCCAAGAGATTAATGATCACTGTTTAATTCTGTTGTTATGCTGATTGGCAGAATGTGTTCAATTTTGTGTGAACAAACAGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTTCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGGTCTGTGTTTTGATACATTTTGTCTTTGCGTTCTGCATTTCGATTATATGCTTGAAGGAGTCTAGACTTATTGACTATAGGTCTATAGCTAACTATGCTTAGGAAACTCTCCACTATGCCATGGTTTTTTAGAGGATTCTTTCTTTTGTGTTATACTCACTGTTTCTATACCATGCAAATCAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGTACATCGTCGCTGCCTTGCTGACCAATTTGCAGTTGTTGAATTTGACATGTTTCTCTTTTTTTGTATTAAGAGGTGTTACTTCTCCGAGCTGTCTTATTCAAAACTTCTATCTTGTTTCTACAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGTAAGCCTACAACATCTCTTGAATATTTTGGCACATATTATGTGTAGCTCTTTGGATATGCTGCACTTGGATTTTGAGTTCCTCATTGGTTATGTTGCATCAAGAGTTCATGTTGCTTGTTTCATATGTAAAGTACACATGCTAACAATCATGTTATATTTACTGACCACTGTTTCGTGTTTTACTTTAGTACTAATGTTGATTGTGCTTACCTTGTTGCTGTTCTACAGGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGGTGAGTTAACTGTCATGTCTGATTCTTTGGTATTCTTCTGCAGGAGTCATTTTGTAACATATTAAATAATGTGTATTAGACTTGAGCTAATTTGCTTGCTGTTGCTACTACTTTCCATTGCAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGTAACTTTTTTTTGGTGCCATTGTCTTTATTATATTTCTTGCCAGTTTTCTTATTTCTACCAAAATGACAACTTTGTTTTATGGACTTCATGCTCGGTCTGACAGGCTATGAGTGAGAAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAGAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACCTAGCAAATCAGAAGAGGAACAACTGAATGTCTTCCGGTTCCCTCCTATTGTTGCTCCTATCAAATGCACTGTGTTCCCCCTGGTGAAGAATCAGGAGTTTGACGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTGGTACGTATATAATATGAAAATAGCTTCTCCCACTGTTGCTTGAAGATATTATTAACATCTAATTGACAATAAAGAAAAACATCTGAGTTAAAAATTATTACCATGTTGGGAAGTGTAATATGCAAATTCATGCTAGTTTATGCATTACTCTATGAGCTTATGTATGTCATGTGCTTGTGCAGCCATTTCTATTGGGAGGAGGTATGCAAGGACAGATGAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029072