BGIOSGA029080

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Revision as of 08:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029080, complete gene.| tag = OS08G05...")
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Gene Name

BGIOSGA029080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029080, complete gene.

LocusTag

OS08G0539600

Ensembl Transcript ID

BGIOSGA029080-TA

Ensembl Protein ID

BGIOSGA029080-PA

Length

3472

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28718577..28722048

Sequence Coding Region

28718577..28718709,28718843..28718910,28719724..28719918,28720029..28720177,28720262..28720424
,28720716..28720808,28721719..28721858,28721949..28722048

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28718577..28722048 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28718577..28722048 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGCGGTTTTCTTCTTCGTCGGACTCGACTGGTAATAATGTTAATGTCAATGTGGATATCTCTCTCTCTCGTGGATTTTGTAGTGTGCCCAAGATGCGATGGATCGTGCTCTCGTTGATTGTTCGGGATCTAGCTATAAAAAAAAAGGAACTTGTCAGGGCAGATCATACCATCACCCACAGGCCACAGCTCCTTGATCCATCTGTAAAGGAGATAGCAGATCAGATTGCAAAGGACCCTGCGTTCACCCAGATGGCGGAGCAGGCACTGGAAGGCGAAGGAGAACAGGGCATGCCTGCAATAGACCCTTACATTGAAACAATGCAAAAGTTCATGGAAAGCCCCCATTTTTTTACAATGGCAGAGCGTCTTGGGGATGCTCTTGTGAAGGATCCTGCAATGTCCAGTCTGCTGGAAAACTTGACCAGTCCAATGCATAATGCAAAGATAGAAGAGCGTGTTTCTCGTATGAAGGAAGATCCAGCCGTGAAATCAATTATGGATGAGTTAGAGACTGGTGATCCTGCTGCACTGATAAAGTACTGGAATGACCCAGAAACATTTCGAAAGATCAGCCAGGCAATGGGGCCTTTAGGCGGCCCTGATTTTGCTGAACCTTCTGGAACTGAAGGAACTGAGGAAGAAGGTGAATATGAAGATGGATCCATTGTCCATCACACTGCCAGTGTTGGTGATGATGAGGGTCTGAAGAAGGCTTTAGATGGTGGAGCAGACAAAGACGAAGAAGATTCAGAGGGCAGAAGGGCCTTACACTTTGCATGTGGATATGGGGAGTTGAAGTGTGCCCAAGTACTTCTTGAGGCGGGTGCTGCAGTGGATGCTTTGGACAAGAACAAGAACACTCCGCTGCATTACGCCGCTGGCTATGGTATGAAGGAGTGCGTGGATCTTCTGCTCAAGAACGGAGCCGCTGTCACCCTCGAAAACATGGATGGCAAGACGGCCATTGACGTTGCGAAGCTCAACAACCAGGACGAGGTTCTCAAGTTGCTGGAAAAGGATGCCTTCCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAERFSSSSDSTGNNVNVNVDISLSRGFCSVPKMRWIVLSLIVRDLAIKKKELVRADHTITHRPQLLDPSVKEIADQIAKDPAFTQMAEQALEGEGEQGMPAIDPYIETMQKFMESPHFFTMAERLGDALVKDPAMSSLLENLTSPMHNAKIEERVSRMKEDPAVKSIMDELETGDPAALIKYWNDPETFRKISQAMGPLGGPDFAEPSGTEGTEEEGEYEDGSIVHHTASVGDDEGLKKALDGGADKDEEDSEGRRALHFACGYGELKCAQVLLEAGAAVDALDKNKNTPLHYAAGYGMKECVDLLLKNGAAVTLENMDGKTAIDVAKLNNQDEVLKLLEKDAFL</aaseq>

Gene Sequence

<dnaseqindica>1..133#267..334#1148..1342#1453..1601#1686..1848#2140..2232#3143..3282#3373..3472#ATGGCGGAGCGGTTTTCTTCTTCGTCGGACTCGACTGGTAATAATGTTAATGTCAATGTGGATATCTCTCTCTCTCGTGGATTTTGTAGTGTGCCCAAGATGCGATGGATCGTGCTCTCGTTGATTGTTCGGGGTGCGTGATTACTGTTTCGGTTGTTGGTTTATAGGGATTTTGTTTATGTGGTCTAAGTGTAATAAACCAGCGAATTAGTGAAACGAAATAATCCCTTTGGTTTCTTTGATTCGGTTTATTTATGTTTATGTAGATCTAGCTATAAAAAAAAAGGAACTTGTCAGGGCAGATCATACCATCACCCACAGGCCACAGCTCCTTGTAAAGGGGTAAAGAAACTGAAATTGGAAGTTTATCATATCATGTTAGTTTTTTTTTTGGTTCATATCCTCATCCTGATAAGAAAAATATCAACCTTGATTTGGTGTTATAGTAGAGATTCTTATGACCGACATTGTTTTGCATTTTGGAATTTGTTTATGTGACTGTCAGCTGATGAGTTGATAAAATCGAATTGGGAATTATTTGGTGCGTTGGTCAAATCCATCTTCATTCATAGTAGTTGCGTTCTAATCCACTTTGCAACCTCAATTTTTCGCGGAAAAGATTTATTGCACTGCAGCTTCCCTCATATATTGTAAGAAGAAAAGGTAGAAAAGAAGCAAGGAATCAGTTCTTTTATACAGCTTCTTTACTAGCCAGTTTTATGCTTTGTTGTCAAAGCTGGCTACGGTACCATGTGATGCATGTTTCTGATTTGATCAATTCTCTTGCAGATGAGAAAAAAAGTTCAAAACCACAAGGATCATCCAATGATCATCAAGGGTTTCTGCCAGGAGGCCCTCCTGCAAATACTTTTGATTTTGCTTCTTTGCACAGCTTGCTCAATTATAACCCCCCCCTCCCTCCACCACCATTATAATAAGTTTGCACTACATGCTGGATTCCCAATTGGCTTCTGTTCACTTGAACTCTAAATACATTTTGTGGTTTCTGTTCACTTGAATTCTTCATACATTTTGTTTGTTACAGTTATTTTACATGATCCTGCCAGCTGCATACTTGCGCTTTAGATTTTATGAACCTTCGGTACTCCCTTTTCAATTGCTTCAAGTCTCCACCTATGTTTTTCAGGATCCATCTGTAAAGGAGATAGCAGATCAGATTGCAAAGGACCCTGCGTTCACCCAGATGGCGGAGCAGGCACTGGAAGGCGAAGGAGAACAGGGCATGCCTGCAATAGACCCTTACATTGAAACAATGCAAAAGTTCATGGAAAGCCCCCATTTTTTTACAATGGCAGAGCGTCTTGGGGATGCTCTTGTGAAGGTACCATGTTTGTTTCCTAGTTTGTCCAAATATCTCCCGTGTGTTCATTTTCCTTGTTTAATTTGGCTATTGTTGTCCTAAATGCTCCACAATTCAATTGCATGGTTTAGGATCCTGCAATGTCCAGTCTGCTGGAAAACTTGACCAGTCCAATGCATAATGCAAAGATAGAAGAGCGTGTTTCTCGTATGAAGGAAGATCCAGCCGTGAAATCAATTATGGATGAGTTAGAGACTGGTGATCCTGCTGCACTGATAAAGTAGGTCATGTTTACTACTGATGATATGCGAATATGACCATATGTTTATCACTTATTGATGTATCCTGCTTTTGCTCATAATAGGTACTGGAATGACCCAGAAACATTTCGAAAGATCAGCCAGGCAATGGGGCCTTTAGGCGGCCCTGATTTTGCTGAACCTTCTGGAACTGAAGGAACTGAGGAAGAAGGTGAATATGAAGATGGATCCATTGTCCATCACACTGCCAGTGTTGGTGATGATGAGGTAAGGGGGCAGAGTGCTAACTGCTAAGTAGTATTACTATTTAGTCTTGAGCTTGAGAGTTTGCATATGTTTCTATGTCTTGTTGGTGTGTAATGTATAATTTACTTGAGAAGTGTTCATTCGTGTGTCTGTGTGGTTATATAATATCTTCAACTACAGTAATCTGCCTCTCCGTTTTGGTTTTGCTCTGAACATGTCTAAGGTTTTCGCACAAATTGTGATCTCGATGGCCTTTTCTGTTTCATTGTCAATTCAGCTTGCCTTTCTTTACAAGTTTAAGTCATCTAATAGGGTCTGAAGAAGGCTTTAGATGGTGGAGCAGACAAAGACGAAGAAGATTCAGAGGGCAGAAGGGCCTTACACTTTGCATGTGGATATGGGGAGGTATGCAAGTCTGCTTAACTAAACCCAATGACAATTGAAACCTGTGAAAGTAGAAAATGCCGAATAAGTACCACTATTATCTACTAGTACCTATTTGTTGTTATGGAAATGACTAGGTTAGCAATGATAAAAACATCTCGTTGCGAATCCTGTGCAAAACGGATTGCATGTATGCCTTACTAGTCTTCAGAAAATTGCATGTATGCAATGTGACAGTTCATTGTGCAAACGAGTGAATATATTGTTGCCATCAGTATCCCCGATACTAATTGAAGTTCCCCTAATGTTTTTTTTTGGTAGCGAGCTATCGTTGAATTCAGCTTATTTGGGGGCTAGTTGTCTTTTTGCATTCTATGATGAGTTTTGACAAATTTATTGATTTATCTTTTTTTTTTTGCTTTTAACACACGTTTCAAGATTTTTTTGGTACTCCCTCCATCCCAGAATATAAGCATTTTGGACATATGCAATGAATCTGGATATATGTACATCTAGATTTATATCTAGAAGTTGTTATATTTTGAGACGGAGGTAGTAGATGGAAAGGTGCAGAGCTTGCTGTTTTACTTTGTTAGTTTTTTGGGGGCAGTTCATTGATGATAATCCAGACCTCACAGGTCAATCCACAGTAACCTGTCCATTGAACATTGCACAAACTTGCCAGATCAATGTGCACCTCTCACCTAGCTATAATAGTATCGAACTATGAGTTTCCATAACCCTGCTGTTTGTATAATTGCATTTGGTGTGCAATGCTAGAGCACAAAAGTTAATGAATGACAAACTACCTTTTGATTCATTGTCTTGTGGATCTAGAATGTGGTGTGAGACTTTTTTTTGGGAGCTGCATCTGCTCCTTACTTGTTCACTGACTAATCAGGATTTGGGGTCAAACTTTTATTTTTTTCAGTTGAAGTGTGCCCAAGTACTTCTTGAGGCGGGTGCTGCAGTGGATGCTTTGGACAAGAACAAGAACACTCCGCTGCATTACGCCGCTGGCTATGGTATGAAGGAGTGCGTGGATCTTCTGCTCAAGAACGGAGCCGCTGTGTAAGTTAAACCTGCTCGCTTTGCTAGCTGCGATCACATCATTTTTTTTTTTTTGCATTCTTTGACTGTCTCGATCGAATTGCATCGCAGCACCCTCGAAAACATGGATGGCAAGACGGCCATTGACGTTGCGAAGCTCAACAACCAGGACGAGGTTCTCAAGTTGCTGGAAAAGGATGCCTTCCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029080