BGIOSGA029100

From RiceWiki
Revision as of 08:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029100| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029100, complete gene.| tag = OS08G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029100

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029100, complete gene.

LocusTag

OS08G0542700

Ensembl Transcript ID

BGIOSGA029100-TA

Ensembl Protein ID

BGIOSGA029100-PA

Length

2841

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28938350..28941190

Sequence Coding Region

28938350..28938749,28939575..28939984,28940327..28941190

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28938350..28941190 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28938350..28941190 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGCAGACGAGCTTCCGATTGGGCGCGCTGGAGAAGCTCAAGAGCTTCAGGGGGATGGAGAAGCAGAAGAGCTTCAAGATGATGTCCATGGACAACTTCCGGAGGCACAGGGACAGCCCCGGGAAGCGCGGCGACACGCCGCTCCACCTCGCCGCGAGGTCCGGGAACGCCGCCGGCGCGCAGCGGATCATCGCCGAGTTCGACCCGGAGGTGGCGGCGGAGCGCGCCGCGCAGGCCAACCACGACGGCGAGACGCCGCTGTACGTCGCCGCCGAGAGGGGGCACACCGACGTGGTGCGCGAGATCCTCAAGGTCTCCGACGTGCAGACGGCCGGCGTCAAGGCGAACAACAGCTTCGACGCGTTCCATATTGCGGCGAAGCAAGGCCATCTAGAAGTTCTGAAGGAGCTGTTGCAGGCTTTTCCTGCTCTTGCAATGACTACAAATTCTGTAAATGCTACAGCTTTGGATACTGCTGCAATTCTGGGTCACACTGAAATTGTTAACCTCCTACTGGAATCTGATGCAAACCTTGCGAGAATTGCAAGAAATAATGGGAAGACAGTTCTGCATTCAGCTGCAAGACTGGGCCATGTGGAAATTGTAAGATCATTATTAAGTAGGGATCCAGGAATTGGTTTAAGAACTGACAAGAAGGGGCAAACAGCACTACATATGGCTTCAAAAGGACAAAATGCTGAAATTGTTATCGAGCTGTTGAAGCCTGATATCTCAGTAATTCATCTGGAAGACAACAAGGGAAACAGACCATTGCATGTTGCAACACGGAAGGCCAATATCGTTATAGTGCAGACTCTACTATCAGTTGAGGGAATTGAAGTAAATGCAGTTAACAGATCAGGGCACACCGCTCTTGCCATTGCTGAGCAACTCAACAATGAAGAACTTGTTAACATCTTGAGAGAGGCTGGTGGAGTAACTGCAAAAGAGCAAGTACATCCACCCAATCCGGCAAAGCAACTTAAGCAAACAGTTAGTGATATCAGACATGATGTCCAGTCCCAGATCAAGCAAACTAAACAGACCAAGATGCAAGTCCAGAAAATCAAGAAGAGACTCGAAAAACTCCACATTGGTGGTCTAAACAATGCCATCAACTCCAATACTGTGGTTGCAGTGCTTATTGCCACCGTCGCCTTTGCTGCCATTTTCACCGTTCCTGGCAATTTTGTGGAAGATATCACTCAGGCACCTCCAGGCATGTCCTTGGGGCAGGCATATGTAGCAAGCAACCCGGCCTTCCTAGTATTTTTGGTCTTTGATGCCTTGGCTCTCTTCATCTCACTTGCTGTCGTCGTCGTCCAGACCTCGCTAATTGTTGTTGAGCAGAAAGCCAAGAGAAGGATGGTCTTTGTGATGAACAAGCTGATGTGGCTGGCATGCCTCTTTATCTCGGTGGCCTTCATAGCACTAACCTATGTTGTTGTCGGGCGCGACGACTGGTGGCTAGCTTGGTGCACAATGGCAATCGGTGCAGTGATCATGCTTACAACTCTTGGTTCCATGTGCTACTGTATCATTGCTCATAGGATGGATGAGAGGAAGATCAGGAAGGCGTCTACAAGCCAATCTCGCTCATGGTCTCAAACAGTTGACTCAGATCCAGATCTACTCAACAGTGAATATAAGAAAATGTATGCACTATAG</cdnaseq>

Protein Sequence

<aaseq>MERQTSFRLGALEKLKSFRGMEKQKSFKMMSMDNFRRHRDSPGKRGDTPLHLAARSGNAAGAQRIIAEFDPEVAAERAAQANHDGETPLYVAAERGHTDVVREILKVSDVQTAGVKANNSFDAFHIAAKQGHLEVLKELLQAFPALAMTTNSVNATALDTAAILGHTEIVNLLLESDANLARIARNNGKTVLHSAARLGHVEIVRSLLSRDPGIGLRTDKKGQTALHMASKGQNAEIVIELLKPDISVIHLEDNKGNRPLHVATRKANIVIVQTLLSVEGIEVNAVNRSGHTALAIAEQLNNEELVNILREAGGVTAKEQVHPPNPAKQLKQTVSDIRHDVQSQIKQTKQTKMQVQKIKKRLEKLHIGGLNNAINSNTVVAVLIATVAFAAIFTVPGNFVEDITQAPPGMSLGQAYVASNPAFLVFLVFDALALFISLAVVVVQTSLIVVEQKAKRRMVFVMNKLMWLACLFISVAFIALTYVVVGRDDWWLAWCTMAIGAVIMLTTLGSMCYCIIAHRMDERKIRKASTSQSRSWSQTVDSDPDLLNSEYKKMYAL</aaseq>

Gene Sequence

<dnaseqindica>1..400#1226..1635#1978..2841#ATGGAGAGGCAGACGAGCTTCCGATTGGGCGCGCTGGAGAAGCTCAAGAGCTTCAGGGGGATGGAGAAGCAGAAGAGCTTCAAGATGATGTCCATGGACAACTTCCGGAGGCACAGGGACAGCCCCGGGAAGCGCGGCGACACGCCGCTCCACCTCGCCGCGAGGTCCGGGAACGCCGCCGGCGCGCAGCGGATCATCGCCGAGTTCGACCCGGAGGTGGCGGCGGAGCGCGCCGCGCAGGCCAACCACGACGGCGAGACGCCGCTGTACGTCGCCGCCGAGAGGGGGCACACCGACGTGGTGCGCGAGATCCTCAAGGTCTCCGACGTGCAGACGGCCGGCGTCAAGGCGAACAACAGCTTCGACGCGTTCCATATTGCGGCGAAGCAAGGCCATCTAGGTCAGTTCTTTCTTCTTCTTCTTCTTCTTTTTTGTTTGTTCTTTTTTTTTTTGTTCATTTTCTGAACCTGATTTCTGTTATTAGTGATGACTGACTTCGATCTCAGCCTGCCAGTGCCAAGTCAATGAGCTGATGATTAGAGGTTTATGGCATTAGGATTTTGCATTGACTTAATCTAATTTGCATGTGTCATTGTGTAGGGCTTTGAAAAATCCTATGCTGAACTTGTCTGATTTGACTTATGGAAATATACAAGTGCTTTTGCTTTTGTTCATTTCTTTTCTTCACAACGTGCATTGCTAACATGAATCGTTGTGGTTACCTTCTTCTCTCTTTTTTTTACATAAATGTCTGAGACTAGTGCATATCTCACATCTGGTTTGATTTAGACCTCATGTCCAGCAAGGAAGCAAATACCTTCTTTTTAGGTGATAGGCAAGCTGAGTTTTTCATTATGGATTTATGGTCTTGTTTAGTGAGGGCTGACAAATTCTGTACCCAAAGAAGCTTTCACGATGTGTCTACATTGAATGGTTTATTTAAGAATATATACAATGAAAAAAATGGTAGTATTCCTTTCGCGCGATGGTGGATTTTGTGCAACCATTATTAGTTTTATGACCTTATGATCTCATTCTGTTTTCTACTTGTGAAAGACTGAAATTCATGTCATTTTAGTCATGGAGTTATATCTAGTAGCCAGCAAACCACAGCTATAGTCATGATCACAATGATTTGTACAAGATATGGTTTAGTTAAGTATTTTGCTAACGAAGAAAAAAGAAATCCTGGCTCATACGTTTCTTTTGTTTCTTGGTTTTTCAGAAGTTCTGAAGGAGCTGTTGCAGGCTTTTCCTGCTCTTGCAATGACTACAAATTCTGTAAATGCTACAGCTTTGGATACTGCTGCAATTCTGGGTCACACTGAAATTGTTAACCTCCTACTGGAATCTGATGCAAACCTTGCGAGAATTGCAAGAAATAATGGGAAGACAGTTCTGCATTCAGCTGCAAGACTGGGCCATGTGGAAATTGTAAGATCATTATTAAGTAGGGATCCAGGAATTGGTTTAAGAACTGACAAGAAGGGGCAAACAGCACTACATATGGCTTCAAAAGGACAAAATGCTGAAATTGTTATCGAGCTGTTGAAGCCTGATATCTCAGTAATTCATCTGGAAGACAACAAGGGAAACAGACCATTGCATGTTGCAACACGGAAGGCCAATATCGTTGTAGGTGATCTTATATTGGGAATTTCATTTGTTTTATTTTACCTCCTTGCTACTATATGTTTTTGTCGATCTTTTTAGATGACTATTTGTTTGCCAAATCACTTGCTATCCTGTTTACTGAGTTTAATTATGTCAGTATTTTGAGAACAGAGATTATCATAACTTTACTGTAGGATACCTCTATTTGATTGGAATGGTGATAATGCTTTCTTTATGAACAAATTCAAAACAAATGCAGGTGCCTGTACATAAGTTTTAAAAAGAATAAAGAAGCATATCATATTTCAAACATATAGAAACAAGAAGGTTTGCTTTGACTGATATATGTGTAATTCCTTACAGATAGTGCAGACTCTACTATCAGTTGAGGGAATTGAAGTAAATGCAGTTAACAGATCAGGGCACACCGCTCTTGCCATTGCTGAGCAACTCAACAATGAAGAACTTGTTAACATCTTGAGAGAGGCTGGTGGAGTAACTGCAAAAGAGCAAGTACATCCACCCAATCCGGCAAAGCAACTTAAGCAAACAGTTAGTGATATCAGACATGATGTCCAGTCCCAGATCAAGCAAACTAAACAGACCAAGATGCAAGTCCAGAAAATCAAGAAGAGACTCGAAAAACTCCACATTGGTGGTCTAAACAATGCCATCAACTCCAATACTGTGGTTGCAGTGCTTATTGCCACCGTCGCCTTTGCTGCCATTTTCACCGTTCCTGGCAATTTTGTGGAAGATATCACTCAGGCACCTCCAGGCATGTCCTTGGGGCAGGCATATGTAGCAAGCAACCCGGCCTTCCTAGTATTTTTGGTCTTTGATGCCTTGGCTCTCTTCATCTCACTTGCTGTCGTCGTCGTCCAGACCTCGCTAATTGTTGTTGAGCAGAAAGCCAAGAGAAGGATGGTCTTTGTGATGAACAAGCTGATGTGGCTGGCATGCCTCTTTATCTCGGTGGCCTTCATAGCACTAACCTATGTTGTTGTCGGGCGCGACGACTGGTGGCTAGCTTGGTGCACAATGGCAATCGGTGCAGTGATCATGCTTACAACTCTTGGTTCCATGTGCTACTGTATCATTGCTCATAGGATGGATGAGAGGAAGATCAGGAAGGCGTCTACAAGCCAATCTCGCTCATGGTCTCAAACAGTTGACTCAGATCCAGATCTACTCAACAGTGAATATAAGAAAATGTATGCACTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029100