Os11g0173700

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0173700| Description = Protein kinase-like domain containing protein| Version = NM_001072405.2 GI:297611327 GeneID:4349911| Length = 4624 b...")
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Gene Name

Os11g0173700

Description

Protein kinase-like domain containing protein

Version

NM_001072405.2 GI:297611327 GeneID:4349911

Length

4624 bp

Definition

Oryza sativa Japonica Group Os11g0173700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3632075..3636698

Sequence Coding Region

3632075..3632091,3632594..3632664,3632850..3633863,3633914..3635461,3635578..3635831
,3636477..3636698

Expression

GEO Profiles:Os11g0173700

Genome Context

<gbrowseImage1> name=NC_008404:3632075..3636698 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3632075..3636698 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaccgatcagccggctgtaaacagaacagaacagaaggcaagtttgcagaggagttccagcctgattaagctaaacaatccagtcatctgttcaactctcagaaacgaaacggatcgactgtcactgcttgaattcaagaactcgatcactctcaatccacatcaatctctcatctcctggaatgacagcacccacttctgcagctgggaaggcatctcatgcagctccaagaacccacctcgcgtcaccgccattgatcttaggaatcaaggcctggttggccacatctctccttcacttggcaacctgacattcctgaggaatctgtcactagcgacgaatgggttcaccggacagattcctgaatctctcggccacctgcgtcgtctccggtcactctacctgagcaacaacacgctgcaggggatcataccgagcttcgccaactgctctgagctcacggtgctatggctggatcacaatgatctcgccggaggattccctggcggcctgcctcttggccttcaggaattacagctctcgtcgaacagacttgtcgggacaatccctccctcgctcagcaacatcacggcgctgaggaagctcagcttcgcgttcaatggcatcaccggcagcatccccggtgagctagcgacgctaagtggggtggagatcctctacgccagcagcaaccggctgttaggtgggtttccagaggcgatcctgaacatgtcggtgctggttgcgcttagcctcagcacgaacagcttcagtggtgagctgccatcgggcatcggtagcttgctgcccaatcttaggcagattgccattggcatcaacttctttcatggagacatcccttcttcgttggcgaatgcttccaatctggtcaagattgatatatctgaaaataactttactggggttgtacctgcctccattggcaagcttgccaatcttacaaggttaaatcttgagatgaaccagctccatgctcgtagcaagcaagactgggagttcatggatagcgtagccaattgtactcagctacaaggaatctctatagcgaggaatcaaatggaaggagaggtaccagaatcaattgtcagggagttttccttcaggcattgcaaatcttcccaacctgataattcttggactagattacaaccgattttcaggttctgtaccacaatggctaggaggtctgaagacattgcagaaactaagcttgtctaccaacagttttacagggtatcttccctcctccctttccaatctgtcacacttgacagagattcttctagacacaaatcagttcattggaaacataccttaagctttggaaaccttcagttcctaacaacaatcaccattactgataacaatcttcatggtggtgtgccaaaggagatcttcaggattccaacaatagcggaagttgggtttgcattaaacaatctcagtggagaacttcctacagaaatagggaatgccaagcagctcatatatttgcagctttcatccaataatctgtcaggagatatacctaatactttgagtaactgtgaaaatttgcaacatgttgagcttgaccaaaataattttagtggaggtattcccacctcgttcggcaaattaattagcctaaaatttctcaacctgtcacacaataagttaagtggatcaataccagtgtcacttggtgaccttcaactccttgaacagatagatttgtcattcaaccatcttacaggtcaggtcccaactaaaggaatcttcaagaattcaacttccatgcaaattgatggaaatttggctctttgtggaggtgcactggagttacacttacctgaatgtcctatcacaccttcaaatacaactaaaggcaagctaccagtactactgaaagtagtgatcccattagctagcatggtgacacttgccgtagtgatattggtcctgtatttgatttggaagggaaaacaaaggacaaactcgatatctttgccctcatttggtagagaatttcccaaagtttcttataaagatcttgccagagcaactaatgggttctcaacatccaatttgattggcgaaggaagatatggttctgtataccaaggacagttatttcaagacataaatgtagttgctatcaaagtcttcagtctagagacaaagggagcacaaaagagcttcattgcagagtgtaatgctttgagaaatgtgcggcatcgcaatctggttcctgtcttgacggcgtgctcaagcattgattcaagtggaaatgacttcaaagcactggtatatgaattcatgccacgaggagacttgcataaattgttgtactcaactccacacgacgaaacatcttcagatctgtgctatatttcactagctcaaaggttaagcattgtggtcaatgtttctgatgcattggcttacctacaccacaaccatcaagggacaattatccattgtgatatcaagcccaccaatattcttttggatgataatatgacagctcatgtcggagactttgggcttgcaaggttcaaaaatgattccagacaatcgtttggtaactcacatttgacctcttcatttgcgataaatggaaccgtaggatatgttgctccagaatgtgccggaggtggacaaatttcaactgctgcagatgtatacagcttcggagttgttctcctcgagatattcataaggaggaggcccacagacgacatgttcaaggatggattgagcattgcaaagttcacagagatgaacatccctgataagatgctgcagattgttgatcctcagctagtacaagagttgagcctctgcaaagaagattcagtcattaacgatgaaaatggagcacaatgtgttctttctgggatccaggttttccttttagcaaatggtgagtatctgtggaagacttacgtggaggctttccgtggcgtggccatcggagaaggcgaagaagtacgtgcacggggagacggcgtcctcgcaaaacgccaccgggcgcacatcgccgtcgccgccgtcaacgcctcctccggcagcggcagctgggacgcacgcactcaggccagagaccgccaggggtag</cdnaseq>

Protein Sequence

<aaseq>MPTDQPAVNRTEQKASLQRSSSLIKLNNPVICSTLRNETDRLSL LEFKNSITLNPHQSLISWNDSTHFCSWEGISCSSKNPPRVTAIDLRNQGLVGHISPSL GNLTFLRNLSLATNGFTGQIPESLGHLRRLRSLYLSNNTLQGIIPSFANCSELTVLWL DHNDLAGGFPGGLPLGLQELQLSSNRLVGTIPPSLSNITALRKLSFAFNGITGSIPGE LATLSGVEILYASSNRLLGGFPEAILNMSVLVALSLSTNSFSGELPSGIGSLLPNLRQ IAIGINFFHGDIPSSLANASNLVKIDISENNFTGVVPASIGKLANLTRLNLEMNQLHA RSKQDWEFMDSVANCTQLQGISIARNQMEGEVPESIVREFSFRHCKSSQPDNSWTRLQ PIFRFCTTMARRSEDIAETKLVYQQFYRVSSLLPFQSVTLDRDSSRHKSVHWKHTLSF GNLQFLTTITITDNNLHGGVPKEIFRIPTIAEVGFALNNLSGELPTEIGNAKQLIYLQ LSSNNLSGDIPNTLSNCENLQHVELDQNNFSGGIPTSFGKLISLKFLNLSHNKLSGSI PVSLGDLQLLEQIDLSFNHLTGQVPTKGIFKNSTSMQIDGNLALCGGALELHLPECPI TPSNTTKGKLPVLLKVVIPLASMVTLAVVILVLYLIWKGKQRTNSISLPSFGREFPKV SYKDLARATNGFSTSNLIGEGRYGSVYQGQLFQDINVVAIKVFSLETKGAQKSFIAEC NALRNVRHRNLVPVLTACSSIDSSGNDFKALVYEFMPRGDLHKLLYSTPHDETSSDLC YISLAQRLSIVVNVSDALAYLHHNHQGTIIHCDIKPTNILLDDNMTAHVGDFGLARFK NDSRQSFGNSHLTSSFAINGTVGYVAPECAGGGQISTAADVYSFGVVLLEIFIRRRPT DDMFKDGLSIAKFTEMNIPDKMLQIVDPQLVQELSLCKEDSVINDENGAQCVLSGIQV FLLANGEYLWKTYVEAFRGVAIGEGEEVRARGDGVLAKRHRAHIAVAAVNASSGSGSW DARTQARDRQG</aaseq>

Gene Sequence

<dnaseqindica>1..17#520..590#776..1789#1840..3387#3504..3757#4403..4624#atgcccaccgatcagccgtaagcctatattctctagcttcttgttcatctttcagtcaggcaatcgcctggctctctctctatatatatatatgcttcagttataaactgaaattaatactgcattcatgcagctgggttttcataatctgaaactgtcagtataacagtttgtgtgtggcatcggatagaattgaaatttattttttcttgcgtatggaaattcaaaatgaatgtgatcgatcatggactagatagagaaattcaaactgccactggtttctcatgtcggcagggatgaaacaggagaacaccagcggtgtctgtgtgctgtagatagagatagacccaaatacaagtttcagtaatctggaggcatgtacacttgtgcagtcgattcagatgcctataattaggcaactcatgtatgcatcgagtagttgaagaatactagctcaaattgtgtgtgactgaccttgaggctttgagctgtaatcctactatctgctcttctgtgcagggctgtaaacagaacagaacagaaggcaagtttgcagaggagttccagcctgattaagctaaacaatccaggtaccttagttgccactcattgcatgtctgaacattttacaacgttttctgaatatctggatatttttttcctctgtttctatgtacaaggtccatcaaaattctacaaaactaggtcatcatgaaggttaccactgcaactgcacatttcctctgggtgttcttggcctccatctcccattcagtcatctgttcaactctcagaaacgaaacggatcgactgtcactgcttgaattcaagaactcgatcactctcaatccacatcaatctctcatctcctggaatgacagcacccacttctgcagctgggaaggcatctcatgcagctccaagaacccacctcgcgtcaccgccattgatcttaggaatcaaggcctggttggccacatctctccttcacttggcaacctgacattcctgaggaatctgtcactagcgacgaatgggttcaccggacagattcctgaatctctcggccacctgcgtcgtctccggtcactctacctgagcaacaacacgctgcaggggatcataccgagcttcgccaactgctctgagctcacggtgctatggctggatcacaatgatctcgccggaggattccctggcggcctgcctcttggccttcaggaattacagctctcgtcgaacagacttgtcgggacaatccctccctcgctcagcaacatcacggcgctgaggaagctcagcttcgcgttcaatggcatcaccggcagcatccccggtgagctagcgacgctaagtggggtggagatcctctacgccagcagcaaccggctgttaggtgggtttccagaggcgatcctgaacatgtcggtgctggttgcgcttagcctcagcacgaacagcttcagtggtgagctgccatcgggcatcggtagcttgctgcccaatcttaggcagattgccattggcatcaacttctttcatggagacatcccttcttcgttggcgaatgcttccaatctggtcaagattgatatatctgaaaataactttactggggttgtacctgcctccattggcaagcttgccaatcttacaaggttaaatcttgagatgaaccagctccatgctcgtagcaagcaagactgggagttcatggatagcgtagccaattgtactcagctacaaggaatctctatagcgaggaatcaaatggaaggagaggtaccaggttcattaggcaatttttcagttcagctacagtatcttttcttgggacagaatcaattgtcagggagttttccttcaggcattgcaaatcttcccaacctgataattcttggactagattacaaccgattttcaggttctgtaccacaatggctaggaggtctgaagacattgcagaaactaagcttgtctaccaacagttttacagggtatcttccctcctccctttccaatctgtcacacttgacagagattcttctagacacaaatcagttcattggaaacataccttaagctttggaaaccttcagttcctaacaacaatcaccattactgataacaatcttcatggtggtgtgccaaaggagatcttcaggattccaacaatagcggaagttgggtttgcattaaacaatctcagtggagaacttcctacagaaatagggaatgccaagcagctcatatatttgcagctttcatccaataatctgtcaggagatatacctaatactttgagtaactgtgaaaatttgcaacatgttgagcttgaccaaaataattttagtggaggtattcccacctcgttcggcaaattaattagcctaaaatttctcaacctgtcacacaataagttaagtggatcaataccagtgtcacttggtgaccttcaactccttgaacagatagatttgtcattcaaccatcttacaggtcaggtcccaactaaaggaatcttcaagaattcaacttccatgcaaattgatggaaatttggctctttgtggaggtgcactggagttacacttacctgaatgtcctatcacaccttcaaatacaactaaaggcaagctaccagtactactgaaagtagtgatcccattagctagcatggtgacacttgccgtagtgatattggtcctgtatttgatttggaagggaaaacaaaggacaaactcgatatctttgccctcatttggtagagaatttcccaaagtttcttataaagatcttgccagagcaactaatgggttctcaacatccaatttgattggcgaaggaagatatggttctgtataccaaggacagttatttcaagacataaatgtagttgctatcaaagtcttcagtctagagacaaagggagcacaaaagagcttcattgcagagtgtaatgctttgagaaatgtgcggcatcgcaatctggttcctgtcttgacggcgtgctcaagcattgattcaagtggaaatgacttcaaagcactggtatatgaattcatgccacgaggagacttgcataaattgttgtactcaactccacacgacgaaacatcttcagatctgtgctatatttcactagctcaaaggttaagcattgtggtcaatgtttctgatgcattggcttacctacaccacaaccatcaagggacaattatccattgtgatatcaagcccaccaatattcttttggatgataatatgacagctcatgtcggagactttgggcttgcaaggttcaaaaatgattccagacaatcgtttggtaactcacatttgacctcttcatttgcgataaatggaaccgtaggatatgttgctccaggtacatgtggtccacttcacactgtgttttcttattaagtgattaatataatggtttcatcatttgtctatttattggagcatttgaaataaactcttcctacatgcaatctgtagaatgtgccggaggtggacaaatttcaactgctgcagatgtatacagcttcggagttgttctcctcgagatattcataaggaggaggcccacagacgacatgttcaaggatggattgagcattgcaaagttcacagagatgaacatccctgataagatgctgcagattgttgatcctcagctagtacaagagttgagcctctgcaaagaagattcagtcattaacgatgaaaatggagcacaatgtgttctttctgtgttgaacattggactctgctgcaccgattcagccccaagcaagcgcatcagcatgcaggaggcggccgacaagctacacacaatcagggattcatatctcagaggatactgaagcagtcagtttcagttgctctgctttgtctgaaactcactggagcaatgccttttcagtttcagttgttatgttgtctcaagctctgaacaatcctcagaagacttgatgttcatcatgtagcattgctcaatacttgacgcaatttagttgacatgaatactacttccgacttccaagaaaatgattgctaacctgtttccccacaacaatatcagctccaaaagtgacgttccagtattactgcttcccatgtcaacatttcttgactgctgcaatgtaaaattaagcagatcaaccagattaagcatcactcattaattagactgaaaatgccaagctctaaagtacacaatcgcatttcatcaacattttcacttccactgaatctctctcagaatgtgacagaacagaaagaaaatcttgagaaaagtgagaccgagtcaatgacagcatcttcagaatttttatttattttattttattttgtttggtcgatcatggtggataggaactgaatgggattagcaggggatccaggttttccttttagcaaatggtgagtatctgtggaagacttacgtggaggctttccgtggcgtggccatcggagaaggcgaagaagtacgtgcacggggagacggcgtcctcgcaaaacgccaccgggcgcacatcgccgtcgccgccgtcaacgcctcctccggcagcggcagctgggacgcacgcactcaggccagagaccgccaggggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0173700, RefSeq:Os11g0173700