BGIOSGA029182

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Revision as of 08:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029182| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029182, complete gene.| tag = OJ1150_...")
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Gene Name

BGIOSGA029182

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029182, complete gene.

LocusTag

OJ1150_A11.25

Ensembl Transcript ID

BGIOSGA029182-TA

Ensembl Protein ID

BGIOSGA029182-PA

Length

2871

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29790583..29793453

Sequence Coding Region

29790583..29790636,29790751..29790822,29790922..29790973,29791098..29791178,29791658..29791776
,29791992..29792211,29792365..29792483,29792573..29792698,29792883..29793023
,29793130..29793453

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29790583..29793453 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29790583..29793453 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCGAAGCACTTCACCTACGTCATCCTCGGCGGCGGCGTCGCCGCGGGATACGCTGCGCGGGAGTTCGCCAAGCAGGGCGTCAAGCCCGGGGAACTCGCCATCATCTCCAAGGAATCGGTGGCTCCCTACGAGCGTCCTGCTCTCAGCAAGGGATACCTCTTTCCTCAGAATGCAGCCAGGCTTCCGGGATTCCACACCTGCGTCGGGAGCGGCGGAGAGAGGCTCTTGCCTGAATGGTATTCCGAGAAAGGTATCGAGCTGATCCTGAGCACCGAAATTGTCAAGGCTGATCTTGCCTCCAAGACATTGACCAGTTCAGCTGATGCAACCTTTACCTATGACACTTTGCTCATTGCCACTGGCTCCTCGGTCATAAAGCTCACTGACTTTGGTGTTCAAGGAGCAGAGGCCAACGACATATTGTACCTGAGGGATATTGAGGACGCTGACAAGTTGGTCGCGGCTATGCAAGCCAAGAAGGATGGAAAGGCTGTGATTGTCGGAGGTGGCTACATAGGACTTGAGCTTAGCGCAGCCTTGAAGACCAACAATTTTGATGTCACTATGGTGTACCCTGAACCTTGGTGCATGCCCCGTCTCTTCACTTCTGGCCTTGCTGCTTTCTACGAGGGATACTACGCTAACAAAGGAATCCATATCATAAAGGGAACCGTGGCTGTTGGTTTTGATGCTGATGCCAATGGAGATGTTACTGCGGTGAAGCTAAAGAATGGAAACGTGCTGGAAGCTGACATTGTTATTGTCGGTGTCGGTGGCAGGCCACTGACTCATCTCTTCAAGGGTCAAGTTGCAGAGGAGAAGGGTGGAATAAAGACTGATGCATTCTTCGAAACGAGCGTTCCTGGTGTATACGCCATTGCCGACGTGGCCGCCTTCCCGATGAAGATATACAATGAGATTAGGAGAGTAGAGCATGTTGACCATGCTCGCAAATCAGCCGAGCAGGCCGTGAAGGCGATCAAGGCGAAGGAGGCCGGCGAGTCGGTGCCGGAGTACGACTACCTGCCCTACTTCTACTCCCGGTCGTTCGACCTCTCGTGGCAGTTCTACGGCGACAACGTCGGCGAGGATGTGCTGTTCGGCGACAACGACCCCACGGCGGCCAAGCCCAAGTTCGGCTCGTACTGGATCAAGGACGGCAAGGTCGTCGGCGTCTTCCTCGAAGGCGGCTCGGCGGAGGAGAATCAGGTCATTGCCAAGGTCGCCAGAGCTCAGCCGCCGGTGGCCGACGTCGAGGCTCTCAAGAAGGAAGGACTCGACTTCGCTGCCAAAGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAKHFTYVILGGGVAAGYAAREFAKQGVKPGELAIISKESVAPYERPALSKGYLFPQNAARLPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLLIATGSSVIKLTDFGVQGAEANDILYLRDIEDADKLVAAMQAKKDGKAVIVGGGYIGLELSAALKTNNFDVTMVYPEPWCMPRLFTSGLAAFYEGYYANKGIHIIKGTVAVGFDADANGDVTAVKLKNGNVLEADIVIVGVGGRPLTHLFKGQVAEEKGGIKTDAFFETSVPGVYAIADVAAFPMKIYNEIRRVEHVDHARKSAEQAVKAIKAKEAGESVPEYDYLPYFYSRSFDLSWQFYGDNVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVGVFLEGGSAEENQVIAKVARAQPPVADVEALKKEGLDFAAKV</aaseq>

Gene Sequence

<dnaseqindica>1..54#169..240#340..391#516..596#1076..1194#1410..1629#1783..1901#1991..2116#2301..2441#2548..2871#ATGGCGGCCGCGAAGCACTTCACCTACGTCATCCTCGGCGGCGGCGTCGCCGCGGTAGCATCGCCACCCTCCTCCTCTACTCTCTTCAATACGCGCTTGCCTTCTCAGGGCCATCACATCATCTCACTCACACGATCGATGAACTCATTTTCATTTTGATTTGTGCAGGGATACGCTGCGCGGGAGTTCGCCAAGCAGGGCGTCAAGCCCGGGGAACTCGCCATCATCTCCAAGGAATCGGTAAACCATCCATCCATCCATCCATCGATTCCTTCCTGAATGAATACTGGACTAGTAATTCCTAATTATTTTTTTTTCCTCTTCGTGTTTCTGCTGCAGGTGGCTCCCTACGAGCGTCCTGCTCTCAGCAAGGGATACCTCTTTCCTCAGAGTACGTCACGCCCTCCCCTCCCCTCCCCTGCCCTGCATATTTATTTTATTTTCTCAACATACTACTAATTACTCTCTTCCATTTCTTGCTGCTGATTCATTCCGATCCATCTTTCTCTCTACAGATGCAGCCAGGCTTCCGGGATTCCACACCTGCGTCGGGAGCGGCGGAGAGAGGCTCTTGCCTGAATGGTATTCCGAGAAAGGTACATTACTGCTTTTTTTTCTCTTTTCTTTTCCATATAATTTGCAATCTGCAGTTGCTGTTCGATCTTCATGCCAGAGTACTTTGTTGATTGCAAATTGCAATGGTGATCGTCTATGCAATGGTTATCCATGAGTTCTTCTGGTCACTTCACAAACCCGTTGCCGTACATTAATTCACAGGCTTTCAGTGCCAGACTGCCAGTAGTACTAACTTGGAAGCTAACCAAACCTTCAAAAAACTTGAAAAGTACCAGTAGTAGTATTTTATAACTCAAGTGTCGTTTCATTAATTCTATCCTCTGATCTCTGATCCTTTTCGAGTAAACAAAGGAATGCCAGCTAATTTAAATGGCCAAAAATATTCCTCTATAAATAAAATTGCTAAAAGTCACCATTTTCTGAATACCGCAGTCTTTCTGACAGATTGATGGCAAACTGAATGAGAGAGTATATGGTGTTTCCATTTGTAATGTTGCAGGTATCGAGCTGATCCTGAGCACCGAAATTGTCAAGGCTGATCTTGCCTCCAAGACATTGACCAGTTCAGCTGATGCAACCTTTACCTATGACACTTTGCTCATTGCCACTGGCTCCTCGGTGAGTTCTCAACTGTACCTTTAAGCTTTAACCCACAAAGAAAAGAGGAATGGTGTTCTTTTTAGTAAATTTTGGTTGTGAACTTGTAATGTTTGTTTATTCATATCGGTTTTTCCAGAGCTATGTTGCTCATGTCATTTTTTTGGGAATACGCGAGACGCGCATTTTTGTATTAAGATGTTGCTCATGTCATGAACATCTGTCTGCTTGATCAGGTCATAAAGCTCACTGACTTTGGTGTTCAAGGAGCAGAGGCCAACGACATATTGTACCTGAGGGATATTGAGGACGCTGACAAGTTGGTCGCGGCTATGCAAGCCAAGAAGGATGGAAAGGCTGTGATTGTCGGAGGTGGCTACATAGGACTTGAGCTTAGCGCAGCCTTGAAGACCAACAATTTTGATGTCACTATGGTGTACCCTGAACCTTGGTGCAGTAAGTCTCCTTATTCTTTGCATCCAGAAAGATTTACTACTATAAATTGTGTTTTCTGAATACTCAACAGCAAGGAAACAAATACCTCTCATCTTTATAGTTGTAACGTATTTGGCCAATGAAATCTCATATTGGAGATGCCATCTGTTGTAGTGCCCCGTCTCTTCACTTCTGGCCTTGCTGCTTTCTACGAGGGATACTACGCTAACAAAGGAATCCATATCATAAAGGGAACCGTGGCTGTTGGTTTTGATGCTGATGCCAATGGAGATGTGAGCACTCTGTAGTTACCACTTAGTCCAGTATCATCTTGCTGTGAAGGCAAATGTTCACCTTGTTAATTTTTTTTTTCTGTTGGCAGGTTACTGCGGTGAAGCTAAAGAATGGAAACGTGCTGGAAGCTGACATTGTTATTGTCGGTGTCGGTGGCAGGCCACTGACTCATCTCTTCAAGGGTCAAGTTGCAGAGGAGAAGGGTGGAATAAAGGTTTGTCCGGTTTCTGTTCATCTTTCAGATTCTGCTCTATCTGCTACATTTGTTGCGTGATGATTGTATTTCAGGCTATTGTCCATTTGAGTCACCCTAATTAGCAACTGAACCTTCTTTCGAGCTTGTTCTTGCTTATACCTTCGAATTAGCTGAACAATTCAAATCTGCATGTGTCTTCCAGACTGATGCATTCTTCGAAACGAGCGTTCCTGGTGTATACGCCATTGCCGACGTGGCCGCCTTCCCGATGAAGATATACAATGAGATTAGGAGAGTAGAGCATGTTGACCATGCTCGCAAATCAGCCGAGCAGGCCGTGAAGGTGAGCCATCCGTTCGTTCTTGATTCTTCATCCTCGTTGCCGCCATTGATCCGGATTCAGAAGTTCTTTGTGATAACCAAATTCACTGGCTTCAATGAACTTGCAGGCGATCAAGGCGAAGGAGGCCGGCGAGTCGGTGCCGGAGTACGACTACCTGCCCTACTTCTACTCCCGGTCGTTCGACCTCTCGTGGCAGTTCTACGGCGACAACGTCGGCGAGGATGTGCTGTTCGGCGACAACGACCCCACGGCGGCCAAGCCCAAGTTCGGCTCGTACTGGATCAAGGACGGCAAGGTCGTCGGCGTCTTCCTCGAAGGCGGCTCGGCGGAGGAGAATCAGGTCATTGCCAAGGTCGCCAGAGCTCAGCCGCCGGTGGCCGACGTCGAGGCTCTCAAGAAGGAAGGACTCGACTTCGCTGCCAAAGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029182