BGIOSGA029193

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Revision as of 08:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029193| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029193, complete gene.| tag = P0604E0...")
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Gene Name

BGIOSGA029193

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029193, complete gene.

LocusTag

P0604E01.3

Ensembl Transcript ID

BGIOSGA029193-TA

Ensembl Protein ID

BGIOSGA029193-PA

Length

4942

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29960006..29964947

Sequence Coding Region

29960006..29960076,29960411..29960445,29961079..29961264,29961915..29962094,29962422..29962606
,29962725..29962820,29963020..29963065,29963186..29963292,29964026..29964127
,29964213..29964947

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29960006..29964947 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29960006..29964947 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCCTCTCCTCCTGTCCCGTCCAAAGTCGACGCCTCGTCTCGGCCCGACCGCTCCCCCAGGCCGCAGAGCTTGGAAATCTCATGGGATTCACAAGCGTTATGCAAGCGTGCAGAGAGTTGCGAGTTGGAGGCAGAAGCACCCTCTATCAATCCTACTTTGCTTCCAGTTCTCGAGGATTTACTTATAGAATTATATGCAATATTGCGTCCAAAGCCTGATGACTATGAGCAACGGCATTTGATGATCGATGTCTTCAACAAAATAGCAGAAGAGATATATGGTAAAAAGAAGGGGTTTCCAGTTGTGGAAGCATTTGGATCGTTCACAATGGATCTATTTACTTCCAAAAGTGACCTTGACCTCTCTGTCAACTTTAATGCTGATTTTCATAGTCAATTTGCTCGCAAGGACAAGATTTCTGTTATTCGGAACCTCGCAAAAGTTCTATATGCTCATCAGAGGAATGGCCGTTGTCATGGGGTTTTACCTGTTGTAACTGCTAAAGTTCCTGTACTGAAGGTTATTGATAAGGGAACTGGGGTTGAGTGTGATATTTCAGTTGAGAACAAAGATGGCGTGTCAAGATCAATGATATTTAAACTTATTTCATCCATTGATGAAAGATTTCAGATACTATGTTATCTGATGAAATTCTGGGCAAAGGCACATGATGTTAATTGCCCCAGAGATCGAACAATGAGCTCAATGGCGATTATCTCTTTAGTTGCTTTCCATTTACAGACCCGGCGACCTCCAATCTTACCTGCATTTTCTGCCTTGTTGAAAGATGGTCCAGACTTTCCAAGTATTCAGAGAAATGTCTCACTAGTTGAGGGGTTTGGGAGCAGAAATAAAGAATCAGTTGCCGAGCTTTTTGTGTCACTTATGAGTAAACTACTATCAGTGGAGGGTTTATGGGAGCAAGGGCTCTGTGCTAGCAATTTTGAAGGGTCATGGATCTTTAAGACCTGGGAAAGAGGAGTTGGTAACTTGAGTGTTGAGGACTTCTTGGACCGGTCACAGAATTTTGCCAGAGCAGTAGGCAAGGAGGAGATGCAGAAAATCAGCGAATGCATAAGGGTCGCTGTTTTGAATTTGAACAATTTCTTTAGGGGTAAAATTGATGCACCAAAGCTGAAGAACCTTTTGTTTGAGCCGCCTCATCAGGATGAGCTGATCAGTAATCCCAGTCTAAAGCGTCCTAAGAGGAAGGACCACCCAACGCATGGCCCAGAAAGCAACCCACAGCAGCAAAAGAAAGCGAAGCATATTATTGGCCCAGAAAGCAACCAGAAGCAGCAAAAGAAAGTGAAGCATACTGTAAACCCTGGACCGGCCGCTAGTAGATCTGCCACTAATTTACACCGTCCTACCGCATTTGTGCCTCAAATACGGCCCATCCAACCAATTAATCAGGTTTCCCACATACCTCAACCTTTGGTTGACCCTATGTTTGCTTATGGGTTACCACCACAACAGCATCTACATTCAGCTCCCCTTTATAGTCAGGGGTTACTAGGTCAACAGCAGGGTAATTTCATCCACCTGAATCCTGGAATCCAACCGCAGCAGCAAGCCCAACATATGTTTGTCCCTTTACTAGAACAGCAACCTGTGATCAATGGTTTTCACCCCTATGATTTCCATTTGGCCCAGCTAATTCAGCATAACGAGAATATAGCGTTACAAAGGAATATAGCTTATGGAACCTATCCATATTACAGGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAASPPVPSKVDASSRPDRSPRPQSLEISWDSQALCKRAESCELEAEAPSINPTLLPVLEDLLIELYAILRPKPDDYEQRHLMIDVFNKIAEEIYGKKKGFPVVEAFGSFTMDLFTSKSDLDLSVNFNADFHSQFARKDKISVIRNLAKVLYAHQRNGRCHGVLPVVTAKVPVLKVIDKGTGVECDISVENKDGVSRSMIFKLISSIDERFQILCYLMKFWAKAHDVNCPRDRTMSSMAIISLVAFHLQTRRPPILPAFSALLKDGPDFPSIQRNVSLVEGFGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVGNLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLFEPPHQDELISNPSLKRPKRKDHPTHGPESNPQQQKKAKHIIGPESNQKQQKKVKHTVNPGPAASRSATNLHRPTAFVPQIRPIQPINQVSHIPQPLVDPMFAYGLPPQQHLHSAPLYSQGLLGQQQGNFIHLNPGIQPQQQAQHMFVPLLEQQPVINGFHPYDFHLAQLIQHNENIALQRNIAYGTYPYYRR</aaseq>

Gene Sequence

<dnaseqindica>1..71#406..440#1074..1259#1910..2089#2417..2601#2720..2815#3015..3060#3181..3287#4021..4122#4208..4942#ATGGCCGCCGCCGCCTCTCCTCCTGTCCCGTCCAAAGTCGACGCCTCGTCTCGGCCCGACCGCTCCCCCAGGTCCGTTATTCTTCGCTCCTCTGCCCCCCTTCGTGTTCCGCTGATCCCCTTGTGCTTTTGGGGGGAATTGGAGTCGCCGCGTGCGTGCGTACGACCAAATTCTACTCGGATTCTTCTTCTTGCTCATGGTACTAGTAGTTCTATAAGACGAGAGAGCGAGGGGATTATGCTTTGTAGATACTAGTATATGCTTAAGCTTAATCCTCTCCTTCAGAATTTGCTGCCATGTCTAGCTTTCTGGATTGGTACGACTACGGACCAACCCGATTTATTTTCCCCCGGTTTATGATGACCTCTCAGTTAAAATTTCTTTCCTTTTGGTGTCATCCTGCAGGCCGCAGAGCTTGGAAATCTCATGGGATTCACAAGGTAGTACTATTTAACTATCTGTTTATTGCTGCTCCCAATTTTTTTTTTTATTATTGGTGTATATTACTTCCTGCCTCATGCTGCTCTTCGATTCAAGCACATCAAGAACCAAACTTTTCTGTTAGATTCCTCTGCTACGGTATCATTTCTGTACACCAGGCATCACAGATAACAACTGTATCATGTGACCATGTCAGATGCATGCAAGCAGCATGCTATATCTTCTGCACTCAATACAACTGGTGGACCTAGACTAATACTCCTATATTTCTTATGAGTAATGACAGTTTCATTTTGCGGCAAAGATAGCTGCTTGTCTGTTTTTCCGTCCACAAAGTTATCCTGTAGCCTCTTGTCATGTTTCGCTTCTCTAGATTTCCTGACTACTTAGAAATAAGTCAATAGCTTCTCTCTGCGCAAGCAAATGCTGGCAGCTCTAAATATATACGTGGTGGCTGTGATTGTTTGCAAACATGACTTCTTTATATGAAGGAGTACTCTGGGCATGTAAATGCTGAAACAGTTGTGAATTACCATGCTTGATACCAATTACACGGACTTCTGCGCCATTAATGAATACTTTCATGTACGCTGCAACTGATACCTTTTATTTAAATTTTGAATTACTAGCAGCGTTATGCAAGCGTGCAGAGAGTTGCGAGTTGGAGGCAGAAGCACCCTCTATCAATCCTACTTTGCTTCCAGTTCTCGAGGATTTACTTATAGAATTATATGCAATATTGCGTCCAAAGCCTGATGACTATGAGCAACGGCATTTGATGATCGATGTCTTCAACAAAATAGCAGAAGAGATATATGGTAAGAGTTATATTTCATCTGTTATCATGGGTCTATGAATTATGCTTTCAAAATATGCGCTTTTGATCATTGTAATTGCTGACTATGCTTGAAAATATAATATGAGAGTTGCAAAAGATGCATTTTCTTGTAATTCATACACATATGCAATCAGGGAAATTCATTTGCAGTTCAACAATAGTGTGAATAGGGTTTTAAACACCTGCAGTTATGATTCATATGCGTCAGCATTCAGCAAAATATGCTTTTTCTGTGCACCTCAGTTATGGATTGCTGACACCTAATGGTCAAGCAAAGACTTTTGCTTCTGATGCTAGAAAGATGCATAGTGCAAAATTTTGTGTTGAAACTTGTACATAACAGAGCATTGGTGAAAAGGATAATGCATTTGGAAACACAAGCATGAAAATTATATGAATTTGGCTTGATTTGTACTACAAATATGCCTAGTTAACCTCCTTTTGACTGTTAGTTGATCAGTTAACTTCAACATGCATTGTTCAGATTTCTGTGTGTGTCTACACTTTTGCAATACACTTTTCTTTACATGCAAGATTCCTTCTTTTACCATGAATACTTAGTCTCTGCCTGAATATTGCAAATTTGTGTGATATTATGACCTGTTTCCTGATTATGATGCCTCCTTCCAGGTAAAAAGAAGGGGTTTCCAGTTGTGGAAGCATTTGGATCGTTCACAATGGATCTATTTACTTCCAAAAGTGACCTTGACCTCTCTGTCAACTTTAATGCTGATTTTCATAGTCAATTTGCTCGCAAGGACAAGATTTCTGTTATTCGGAACCTCGCAAAAGTTCTATATGCTCATCAGAGTAATTATCTACACTCTCTAGGTTTATGTAACAGATCCAAAAGGGTCAACTTTATATCCATATATTTATGGTGTCCCTTCATATATGTTGCAATATGTGTCACACACCAAATATCTAAAATTTAAATGAAGAATTTAAATTAGTTTTGTTATTAACAGTATATCAAATTATCGGTGTATGTTTGATAAGAAGTGTATTCTCCTTGACATGGTGTTGACAATTGGACATAAATAACTTCATTTTGATATATGTCACCTATTTAATAGAACCTTTTGATGCCAATTTTAATGTGATTTCGTTTCCTTGTCCTTATATTGTCAATATCAGGGAATGGCCGTTGTCATGGGGTTTTACCTGTTGTAACTGCTAAAGTTCCTGTACTGAAGGTTATTGATAAGGGAACTGGGGTTGAGTGTGATATTTCAGTTGAGAACAAAGATGGCGTGTCAAGATCAATGATATTTAAACTTATTTCATCCATTGATGAAAGATTTCAGATACTATGTTATCTGGTATTGCAATTCTCTGTCACATTTTTTTCGTTCCAATGGGCAATAAAATTGTTGCAAGAATCCCCATAAATTGGCCTTCTAAAATATGTGACACCAACCGTTTCTGTTAATTCTGCAGATGAAATTCTGGGCAAAGGCACATGATGTTAATTGCCCCAGAGATCGAACAATGAGCTCAATGGCGATTATCTCTTTAGTTGCTTTCCATTTACAGGTTTGTTACTTTGACTTGAGTTTTTATTGGACTTTTTAGTCATGAGTATCAAGTAGTCAGGGTAGCTTCACTGGCCTCATGGAATTTCCATTAAAGTTCTACAGCCTGTATGTATAAGCTTGCAGTTAATCCTAAGTCCTTTTTTCTGTTGGCAAAAAGAGAAATAAACACACTTTTTATTAAACAATGTGGATTACAGACCCGGCGACCTCCAATCTTACCTGCATTTTCTGCCTTGTTGAAAGGTACTCTCTCTATTTTTAGGTGTATGTCATTCTCACTGCTACGCTTTCCTGGGATTGGTTTCTCTGTTGTTGATATAAAACTTATATGAAGAAACTAAGATAATTTCCATCGTCTTGTAGATGGTCCAGACTTTCCAAGTATTCAGAGAAATGTCTCACTAGTTGAGGGGTTTGGGAGCAGAAATAAAGAATCAGTTGCCGAGCTTTTTGTGTCACTTATGAGTAAAGTAAGTGAATTAAAAATGCACCTTCCATTTATGTTTGTTACAGGCCAATATTCTATTTTGAATCCATAGGGATATTGTTGAGTTATGGTTGTTTTGCCCTCATTTCCTAGAGTTTTTACATTGATTGACAAAGGGATATCTCCCCTTGCACATGACTTGATCTGAACCCCTGCAAATGTCTGAACAAATGCCCAGTTTGAAAAAGATTATTGACTGGATTATTGTAGTGGATTATCTGCACGGCGGTAAATACAAATTAAATATTTTGATAAAAAATATTAATAAATAAGAAGCTTAGAACAAGGGATCTAAGCAATGCAGTAGAAGAAAGGTTTTTGAGAAAACATATTTTTAGAGGCTAATAATCCGTGACAAAAATCTGTGACAGTAAACTCCCAGTTTGACCCAGCTGGGACGGGACGGTCCTGTTCACCTGGTCCATGTCACTGTTCTCTTGTGCCCTTCTAAACATTGTTCTCTTGTATAGCATCATCGACTTCATTATCTAATTAAGGGATCTTGTTACACAGTTAGAGAGGGTTATACCACCTGAGTCCATCTAATTTGTTGCTAGGCAAAGTTGTTTGCTTATTTTGGTGTCGTATATACGTATGAAAAGGTTTGTAAGCTGTTCATTGATTACTTAGTTAACATTACTTCCACAAAAGAGCCCTTCCTTCTTAATGTCAGAACTCATTATGCTGACAGACACTATTGACCTTCTCTCATGCAGCTACTATCAGTGGAGGGTTTATGGGAGCAAGGGCTCTGTGCTAGCAATTTTGAAGGGTCATGGATCTTTAAGACCTGGGAAAGAGGAGTTGGTAACTTGAGTGTAAGCTTTTCCATGAATTCATTGTGCTTTTTTAGTAACTTTTGCAAAAGTTTGTTTATTTATACACAACAAGCAATTCATGCAGGTTGAGGACTTCTTGGACCGGTCACAGAATTTTGCCAGAGCAGTAGGCAAGGAGGAGATGCAGAAAATCAGCGAATGCATAAGGGTCGCTGTTTTGAATTTGAACAATTTCTTTAGGGGTAAAATTGATGCACCAAAGCTGAAGAACCTTTTGTTTGAGCCGCCTCATCAGGATGAGCTGATCAGTAATCCCAGTCTAAAGCGTCCTAAGAGGAAGGACCACCCAACGCATGGCCCAGAAAGCAACCCACAGCAGCAAAAGAAAGCGAAGCATATTATTGGCCCAGAAAGCAACCAGAAGCAGCAAAAGAAAGTGAAGCATACTGTAAACCCTGGACCGGCCGCTAGTAGATCTGCCACTAATTTACACCGTCCTACCGCATTTGTGCCTCAAATACGGCCCATCCAACCAATTAATCAGGTTTCCCACATACCTCAACCTTTGGTTGACCCTATGTTTGCTTATGGGTTACCACCACAACAGCATCTACATTCAGCTCCCCTTTATAGTCAGGGGTTACTAGGTCAACAGCAGGGTAATTTCATCCACCTGAATCCTGGAATCCAACCGCAGCAGCAAGCCCAACATATGTTTGTCCCTTTACTAGAACAGCAACCTGTGATCAATGGTTTTCACCCCTATGATTTCCATTTGGCCCAGCTAATTCAGCATAACGAGAATATAGCGTTACAAAGGAATATAGCTTATGGAACCTATCCATATTACAGGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029193