Os11g0175400

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0175400| Description = Plant neutral invertase family protein| Version = NM_001072410.1 GI:115484432 GeneID:4349916| Length = 3893 bp| Def...")
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Gene Name

Os11g0175400

Description

Plant neutral invertase family protein

Version

NM_001072410.1 GI:115484432 GeneID:4349916

Length

3893 bp

Definition

Oryza sativa Japonica Group Os11g0175400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3722840..3726732

Sequence Coding Region

3723188..3723483,3724021..3724579,3725021..3725452,3725938..3726297

Expression

GEO Profiles:Os11g0175400

Genome Context

<gbrowseImage1> name=NC_008404:3722840..3726732 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3722840..3726732 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagagggtgtcgtcccacgtctccatcgcctcggaggcggagatcaacctcgatctctcgcggctcctcatcgacaagccgaggctgacgctggagaggaagaggtccttcgacgagcagtcgtggagtgagctctcccaccgccagaacgacggcttcgacagcatcatgcactccccggcgttcccctcgggcttcgactcgcccttctcgctggggacgctcggtgatccccacccgctcgtgaacgaggcgtgggaggctctcaggaagtccgtggtgtacttccgggggcagccggttgggacgattgccgccgtcgaccatgcgtccgaggaggtgctcaattatgatcaggtttttgtgcgagatttttttccaagtgcattggcttttctaatgaataatgagactgatatagtgaaaaacttcctcttgaaaacactccacctgcaaagctcggagaaaatggtagaccgtttcaagcttggagcaggagcgatgcctgcaagtttcaaggtggatcgtaatcggaacagaaacactgaaactttagttgcagattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggattattctactccgggcatatacaaagtatacggcagatactagtttggcagaatcaccagagtgtcagaactgcatgaggctgatactgaacctatgcttatctgagggatttgataccttcccaactctgctctgcacagatggctgctcaatgatagatcgtcgaatgggtatatatggttatcctattgagatccaagctctattctacatggcgttgagatgtgctctgcagatgcttaagccagatggtgaagggaaggatttcatagaaaagatagggcaacggctacatgctctaacctaccacatgaggaattacttctggctagatttcccacacctgaataacatatacagatataaaacagaggagtattcacacactgctgtgaacaaattcaatgtcatcccggattcaatccctgactgggtgtttgatttcatgccatgccggggaggctacttccttggcaacgtgagcccagctatgatggactttcggtggtttgcccttggaaattgcattgccattatatcatctctggctactccagagcaatcagtggcaataatggatctgattgaggagcggtgggaagagctagttggtgagatgcctctgaagatatgttaccctgcaattgagaaccatgaatggagaataatcactggctgcgacccgaagaacacccggtggagttatcacaatggaggatcatggccagttctcctgtggctgctgacagcagcctgcatcaagactgggcgtccgcagatggcgaagcgcgccattgagctcgccgagtccaggctactgaaggacggctggccagagtactacgatggcaagctgggacggttcatcggcaagcaggccaggaagttccagacatggtccatcgctggctacctcgtagcccgtatgatgctggaggacccgtcgacgctgatgatgatctccatggaggaagaccggccggtgaagccgaccatgcgacggtcagcatcatggaatgcctga</cdnaseq>

Protein Sequence

<aaseq>MKRVSSHVSIASEAEINLDLSRLLIDKPRLTLERKRSFDEQSWS ELSHRQNDGFDSIMHSPAFPSGFDSPFSLGTLGDPHPLVNEAWEALRKSVVYFRGQPV GTIAAVDHASEEVLNYDQVFVRDFFPSALAFLMNNETDIVKNFLLKTLHLQSSEKMVD RFKLGAGAMPASFKVDRNRNRNTETLVADFGESAIGRVAPVDSGFWWIILLRAYTKYT ADTSLAESPECQNCMRLILNLCLSEGFDTFPTLLCTDGCSMIDRRMGIYGYPIEIQAL FYMALRCALQMLKPDGEGKDFIEKIGQRLHALTYHMRNYFWLDFPHLNNIYRYKTEEY SHTAVNKFNVIPDSIPDWVFDFMPCRGGYFLGNVSPAMMDFRWFALGNCIAIISSLAT PEQSVAIMDLIEERWEELVGEMPLKICYPAIENHEWRIITGCDPKNTRWSYHNGGSWP VLLWLLTAACIKTGRPQMAKRAIELAESRLLKDGWPEYYDGKLGRFIGKQARKFQTWS IAGYLVARMMLEDPSTLMMISMEEDRPVKPTMRRSASWNA</aaseq>

Gene Sequence

<dnaseqindica>3250..3545#2154..2712#1281..1712#436..795#ggatagtctcctccctccaccaccaccacctccttccacgatccctccccctcttgatcccatccgccgccggaggagatcttgccgttcttgcgcttggatctagaccgcaagatcggtgaacggcgacgctctcattggttggtttattagttggctggtttctctctcctcgtcgattcttctccggcgaacacgccgccgccgccgcttcggattcaaggtattcttctctcctcgccggccgccgccgctgattttgctacggtcttcgattgattgcttgctgtccggtgtcaaatccgaatatattctttcttgatttcttctcaggatcttgcattgcctgtctttccaatttcacattggatttactcgaactgattcgtgctgaaacaaatttgaccaagaaaagaagaggaggtcatcagcaggatgaagagggtgtcgtcccacgtctccatcgcctcggaggcggagatcaacctcgatctctcgcggctcctcatcgacaagccgaggctgacgctggagaggaagaggtccttcgacgagcagtcgtggagtgagctctcccaccgccagaacgacggcttcgacagcatcatgcactccccggcgttcccctcgggcttcgactcgcccttctcgctggggacgctcggtgatccccacccgctcgtgaacgaggcgtgggaggctctcaggaagtccgtggtgtacttccgggggcagccggttgggacgattgccgccgtcgaccatgcgtccgaggaggtgctcaattatgatcaggtgaaatcggaatcctctgcttgttcatatggtttctgaaaactgaatctcgtttttatgttcttgttgtatgatgtattgaatgtttggtttatacatgttgaaatcagtacctgagtaatctggtgtgtttaggatctttgtagtgtttgatgcttagcctttgtttgatgttgatatatatgattatgtcgattatcgagcaatataatagctttactgaatatattatgtaggctgttaaatggtaactatatccatcatcactggcatggagtcctgcagagcaaattcgtttgttttactagcacttatgatgacctgttcagtttgattatctaagcagtatggctttgaaaactttgcttgctttctagctaggattcttctgcatgcttgttttttcaatgtttttttccccctgaatcaaatgaatagttcagttatgcttcacctctttcctgatgttatccttacaatggcaggtttttgtgcgagatttttttccaagtgcattggcttttctaatgaataatgagactgatatagtgaaaaacttcctcttgaaaacactccacctgcaaagctcggagaaaatggtagaccgtttcaagcttggagcaggagcgatgcctgcaagtttcaaggtggatcgtaatcggaacagaaacactgaaactttagttgcagattttggtgagagtgcaattgggagggtggctccagtggactctggattttggtggattattctactccgggcatatacaaagtatacggcagatactagtttggcagaatcaccagagtgtcagaactgcatgaggctgatactgaacctatgcttatctgagggatttgataccttcccaactctgctctgcacagatggctgctcaatgatagatcgtcgaatggtatgagctttcaccttgatttgatttatttcttgacatgtatcattaaaaacagtacagttcagttgatgtggcaacaaagaagctgaatgtttctgctttttcttcttagaaccaagcaagttctgttttttcaaaacatttttttaataaaacgggcagaaatctgatattcaaagcacaatgtccgggagcactgcattgttattccaagtttcaagtataagcgttgtcttcttaaccttctctgaaagagatactacgtagtttgaatttacttaaaaatggataatagtgctaacaggcatttgtagtagtataatactataatctcattcctagaagttctactttttgaactacaattttataattggtgattgagatccttatcattacatgactgtttggctcaaatgttaaatctactattatttccagggtatatatggttatcctattgagatccaagctctattctacatggcgttgagatgtgctctgcagatgcttaagccagatggtgaagggaaggatttcatagaaaagatagggcaacggctacatgctctaacctaccacatgaggaattacttctggctagatttcccacacctgaataacatatacagatataaaacagaggagtattcacacactgctgtgaacaaattcaatgtcatcccggattcaatccctgactgggtgtttgatttcatgccatgccggggaggctacttccttggcaacgtgagcccagctatgatggactttcggtggtttgcccttggaaattgcattgccattatatcatctctggctactccagagcaatcagtggcaataatggatctgattgaggagcggtgggaagagctagttggtgagatgcctctgaagatatgttaccctgcaattgagaaccatgaatggagaataatcactggctgcgacccgaagaacacccggtggagttatcacaatggaggatcatggccaggttaaagttttccttttgcactgtgctaacttgagatgattctgttgctgatccttactatgcattactcttcataaaaattagtcatgtccaatattatggctgatagcttagatgtcaattcatcacacacaataataaataggtaaactaaagtttattctgaaatcgatcacataatactattcaacattcacctcttctgataatgactttgttctaataatttttattaatcaagtcttatactgtaagatccttaatgtcatacagaagctgtaaaaactaactttttgggggtagctaaggtgcttatggctatgaaattttgacttcttcatctgttttcatcaaattgaacagaaccgacagatccctttgagggttgagtgtggcacttttttttttcctaaagttgatccgatcttcgtgttccctagatagttggcgaaatgtgattctgatgttcacaaccaaagtcacctgaatcctcattccaagatcttaacgtttatgtgtgtgttctcccatctgcagttctcctgtggctgctgacagcagcctgcatcaagactgggcgtccgcagatggcgaagcgcgccattgagctcgccgagtccaggctactgaaggacggctggccagagtactacgatggcaagctgggacggttcatcggcaagcaggccaggaagttccagacatggtccatcgctggctacctcgtagcccgtatgatgctggaggacccgtcgacgctgatgatgatctccatggaggaagaccggccggtgaagccgaccatgcgacggtcagcatcatggaatgcctgaaatgttttgatagaatttttttttcccaaagagaggttcaatgtggaaacttataggagttttgtccaaacatgaaaatggggttcaaaatttactgtaactgtactgtcagttaggacagaagtgtatacgatagatccaagtcgtttcagagcaattttgtccaacttttcgtatctggcttcatcaatccaacagagaagaagtttttgttggtgaaacatttttgcaataattaaacagttttgtcttgacatatatactagcatatgtttctgtgatggataattctttgtaatactttgtaggactttctgttaatatactcctcacatattttcattgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0175400, RefSeq:Os11g0175400