BGIOSGA029218

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Revision as of 08:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029218| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029218, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029218

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029218, complete gene.

LocusTag

OSJNBA0044E16.26

Ensembl Transcript ID

BGIOSGA029218-TA

Ensembl Protein ID

BGIOSGA029218-PA

Length

4894

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:30336055..30340948

Sequence Coding Region

30336055..30336096,30336227..30336394,30336466..30336540,30336621..30336673,30337164..30337314
,30337756..30337866,30338715..30338841,30339336..30339436,30339761..30339899
,30340307..30340359,30340871..30340948

Genome Context

<gbrowseImage1> name=IndicaChromosome08:30336055..30340948 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:30336055..30340948 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAACAGATGCTTCTGAGGCAGAGGAAATAGATGTAGAGAGTCTTCTGGAATCACTAGAGAAGAAAGAAGTTTTGAGTTCAAGCATGCCAAAATGCATCGCCTCCAAGTCAAATTTGAGAATAAGTGCAGATGGAATAGGATCCATCAGTGGCAGATTACTTTTAGGCACTGCCGAAATTATACCCTCTGAAGAGCTCATAGATACAACTGGTGCGGGTGATGCATTTATCGGAGCAGTTCTCTACGGTTTATGCTCTGGCATGCCGCCTGAGAAGATGCTGCCTTTTGCAGCTCAAGTGGCTGCTTGCGGGTGCAGGGGTTTAGGGGCTCGGACTGCTCTTCCCCATCGCACAGATCCCCGCCTGGTTGCCTATTGA</cdnaseq>

Protein Sequence

<aaseq>MASAAASSSKPPVVLGCGAVSADYLATVASFPNPDDKIRSLTLKVQGGGNTGNALTAAARLGLRPRIISKVSNDPQGRNILKELQDDGVDTSHILVAEEGNSPFTYIIVDNQTKTRTCIHTPGYPPMVPEELTQENLFAALDGADIVYFDVRLHETALLVAEEASQRKLPILIDAERKRDGLDELLNFASYVVCSAKFPQAWTGASSTPVALVSMLLRLPNIKFIIVTLGEKGCLMLERSTTDASEAEEIDVESLLESLEKKEVLSSSMPKCIASKSNLRISADGIGSISGRLLLGTAEIIPSEELIDTTGAGDAFIGAVLYGLCSGMPPEKMLPFAAQVAACGCRGLGARTALPHRTDPRLVAY</aaseq>

Gene Sequence

<dnaseqindica>1..42#173..340#412..486#567..619#1110..1260#1702..1812#2661..2787#3282..3382#3707..3845#4253..4305#4817..4894#ATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGGTACGCCTCTCCTCTCCTCTTCACTCCCTCGATTCGCTCCCCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTGCACGCATCACACCCACACCCTCACAGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTACTACCCACTTCACTTGCTCCTCCTTCAATTCAATTATTACTCCTATTTACGAAAGCCTGCACTACCAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTACTAATTACTTTAACTTACTATGCCTTTTCTTCTTTTCTACCAGTAATAATTATCATGGATGCCGCATCAATTTTCAGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGTAACTCACTCATTTTCTACCTACTCTACATGTTCATTAGATATATATATATGTCCTCATGTTTGTACAACTAGCTAAGTACCCATCTGTTGCAATTGCAACGCAACTTTAAACTTGACAAGTTCTACATAATCCTTTTAAGAGATGATATATACTCCATTCCCAACTAAGCATAACATTCCTAAAAGAAGCAACATATGCAAATCTTTCTTCTAAACAGATGCCCCTTGACTTATTTTAAGTGAAGTACACCCTTTTGGTCACTTGCTTACCAATGGATATGCATTTACAGTTTATTCATTGGTATGATACAATGTACATATCACTTTGGTTCACGTCCTGATGTTAAAAGTGTCCCCTTTTTTTATCTCTTTTTTAAAAATAATCTTACCGTTCATTTCACAAATCGGATGGTCATACAAAAGTGGCACTCTAATTCTTAAAATATTCAGCCTGTTATTACTACTGTTTAATTCCCTCTTTCTTTCAGGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCGTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTTTTCCTATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGAATATCACTATGAATAGGAAAGCTGCCATGTCCAATTCGTTAATATATAACATATGCAGTGTCAATGCCATGTGTAAGCCTTTTTTCTACACACCTGTAGCATTTTTTTGTTTTGGTCAAGGGTACGCCTAGTAGTGAGATTGAGCTTTGTTTGAGGAACAATCCAGTGCAGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGTAACTAATTCTATTGCATAAGGGTTTAACCATTAAGCCCTGTCTGTATTCAGCAAGAAAAGTTCGCTTTAATGTGCATTATTTTTCTCCTGAAAAGTTATCTTAAGCTATTTTTCTCGTTTAAAACTGGTAAGTGTGTACGTTTGGCATTGCCTTGTGTCATCCGACTAATCACGATTAGTCATGATTAATCGTTCTGATCGGCATCAGTAGCTTGATTATGCACTCCGACACGATTAGCTTGATCAGAAAACTAGTTGTCCGACTAATCACCGACCAAACGCGATTACTCGTCCGGTTATGCTATGGACGACTAGTAAGAAGCTACCAAGCCATGCTTGATGCTTGGATTCCTTGCTTTCTTAACACTTTACACACATTTATTATAGTATGTTTGCATGGCATAGTACTAAATCACAGATTTACTACCATATATAGAAAAAAATCGTTATAATGTAGAGTTATACTTAACTACTTATACTATACACATTCTGGGTACCAGGACGACTAGACACCGACTAGCAATCGACTAACCGGACCTGATCAACGACTAATCGCGATTAGTCGTCTGATTGTTGCCCTTACAAAACTAACTTTAACTTACGATTTGAAAACAGGCTAGTCAAGAATTTGTATCTTCACTTTATTTCCCCATGATTCTGGCCTTAGTTCTTTTGGAACATGAAGGGACACTTAATGTCACTACCATGGTTCCAATGAATGGTGATGGCATGTAAAGTTTTGTGTTCAGAGGCTGAGTTTGATATTACGGGAAACTGTGTCTTGGTATCTCAGATTGCTACTTTCTAGTATTTCTTAATGATGTTTTTTTAATGTGAATAATGCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAACAGGTGAGTTTACCATACTGCTGCATGCCAATTCTAGCGAAGCTTTATAGAAAAAACATGGACTGTCATGTAGGAAATCACTGTATGAACAGAGCCCAGCAACATGGTGCACTGGTCTCACCATCCGCATAACCAGAAAATTAGAGATATGAGGTTTACTTATTTATTGAGTGCTAAACGATAATATCAGAGGTAGATATTAGAAAGGGTCATTAGGAAGTTATTTAAAGGAGACTTGGCATCTTCTGAATTAGCAAGCAAGAGATTATTCTGGTATTTCCCTTTATCTCCGTGCCCCTTCCATTCTCTAGCTGCGCTGTCACAACAGTTCTTGGCCGAGGAAGCCCAGGTACTAACCAACTACCAAGCATAGTTATCCATTGTGCTCGATTGGGAGACATGACATGGACACCTGAGATATCCATTTTACTTGAAAAGAATTTATGTTTCTCTCCGTTATTTTTACAGAAAACTATAACATGCTGCTCAACTTGCAGATGCTTCTGAGGCAGAGGAAATAGATGTAGAGAGTCTTCTGGAATCACTAGAGAAGAAAGAAGTTTTGAGTTCAAGCATGCCAAAATGCATCGCCTCCAAGGTATGGCATCTCTTGGATGTGCTTTCTGCTTGGACTTGAATCTGCATTATTTGGTCCATGCTATCTTGCGACTTAAAGATCCATGGTTACACAACAGGGGATAAAGTTATCTAATGTAAATGCCCCCTCCTCTTTTCCTCTTTTTATTTTTTGTGGGTGTGTGGGGGTGTTGGGGTTTAGTTTAACTAATTGCTGGGGTGTGTGTATCTGCTATCTTTTGTAAGTTAGTGACAGGGTTTCCAGTTTTTTCTATTCACATTTACATTTTCTTTTCAACTTTATATGTCCCTTATCTAGTTGTTTCTGCTTCTTTTATTGTTTTAGTCAAATTTGAGAATAAGTGCAGATGGAATAGGATCCATCAGTGGCAGATTACTTTTAGGCACTGCCGAAATTATACCCTCTGAAGAGCTCATAGATACAACTGGTGCGGGTGATGCATTTATCGGAGCAGTTCTCTACGGTCAGTATGTAATTTCCAACTTTTTCATGCTAAAAATAGCTGGTTTTATGCTACTTAACTGTAGCTTTTGTTAGTGGACCAAGTAAATTTTGTTCTGTGAAATCAGTTGTTGTCAACTTAGCAGTAGTATGTTTCATCTGTCATATTTAAAAGTTATCCGGTATCCACCAAAGTTGTTAATGATGTGTTCGCATAACGTTCTATAGCCTCAAAATACAAGCAGTCGCAATACACGACTAATGTTGAGCGCATGGCCTTTGGGGGTGGATAACCCCCCACGAAAAACATATTGTAATTTGGACTGTAAACGTTGCTTCTCTTTTGTTGATTATGACTGCGGTAATAGGTTTTGGCCTATCATTATGTGAGGTGGCATGAGCTGATTTGTTGTCTGTTTTGTGGTTTAGGTTTATGCTCTGGCATGCCGCCTGAGAAGATGCTGCCTTTTGCAGCTCAAGTGGTAAGATAACTCTATAGTATTGCACTCGAGTACTGCAGTTAGTTGGGAATTTTCTGCTAAGCACAACCACTTATTACCACATACCACAGCAATACTATCATCTAAGCTGCTCTAGGGCACACACAGGAGGCTCACCTAAACGCACTGTTACTAGAACACAGCCCAGAAGTTGCTACTAAATGATTATGTTCCTTTTTCTTTGTATAACAGTATAAGTAAAAAAAATATAGAGGGGAAATTTCAGCCAGTAATTGCATTGGTATCGAGATTGCCGTTTATAGGTGGATGTGTGTACCTATAAAACTGAGAAGTGGGTAAACTGGCAAATGATTTATATAAAGTAAATTGCGTTCATGGTACACGAACTTATATGGTGGGTGCAAATAGGTACAACAACTTGCAAATTGTTTATTCCGGTACAATAACTTGGTTAGTTCGTGCAAACCTGGGCCAAACCAATCCACACAAGTAAAATTAATCTAATATGATACATATGTGTGTGTGTTTGCAGGCTGCTTGCGGGTGCAGGGGTTTAGGGGCTCGGACTGCTCTTCCCCATCGCACAGATCCCCGCCTGGTTGCCTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029218

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