Os11g0176100

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Gene Name

Os11g0176100

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001072415.1 GI:115484442 GeneID:4349923

Length

5081 bp

Definition

Oryza sativa Japonica Group Os11g0176100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3779191..3784271

Sequence Coding Region

3779375..3779420,3779807..3779885,3780344..3780518,3781640..3781673,3781787..3782025
,3782118..3782195,3782419..3782454,3782546..3782968,3783228..3783473
,3783698..3783829

Expression

GEO Profiles:Os11g0176100

Genome Context

<gbrowseImage1> name=NC_008404:3779191..3784271 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3779191..3784271 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcggcccccgccggcgcccagaaccgctgcgtcttcgtcgggaacattccttacgatgcgacggaggagcagctcgtgcagatttgcgaggaagtcggccctgtggtctcattcagattggttattgataaagaaacagggaagccaaagggttatgggttttgtgagtacaaggatgaggagactgctctaagtgcacgccggaaccttcaaggttatgaaattaatggccgtcagttacgtgttgattttgctgaaaatgggaggaatgctgacagaaacagagaaaagggtcgtggaggacctggaatggcatccagtgttgatactcagaaacaattagctgggactccggttgtaggcgatacaggtcttcatcagccagttggtcttccatcggctattcatgctgcatctgtgatggctggtattcttggaggatctcaaactgcaaatgttcaaaatggtttacctgtccagtatgggcttggaaatgaccctcttactcattatttggccagaatgtcaaagcaccagttgtatgaaatcatgtctgagttgaagtccctaactagtcaaaataaggatgttgccaacaaactgctgcaaggaattccacagctgtcaaaggccctatttcagtcacaaataatgcttggaatggtgacgccccagatgatgcagatggcaaagagccaacagccctctagctccttggcacaatcatcatctcacataagcgaaccatttccacagccagatgctatgatatcaagtgttccaagaccttctgcaagcttgccaaacccaaatgtcctgcaggacccttctgcacagctgcataattttcctcagtatccgcattcatctcagcctgcgggcacaatatttccacatggaagtcagtctggggtgggcatacatcctccaattgtatctcaactccttggtgcctcttccagtgttcctcctctaccccttgctacctcaggaagcctgatatcgcaggttcagcccccatttatgccacatcaccctaggccaccagctatgccagcgggtatgcaacaactaccattgactcatccacatgttccccaggtacctgctatacctgatatagcacagaaggaaatgaggtttcctgagcaagcaaatcgttcgacggagtttgctcatcatccaaagttgcgaaaattggaggatggaacatccacacctggaattgtaaacaacaatccagctgtttatcctgctccatcccaaggaatgctccctggtggaccatcagggagctataattctgctgctgttagcttccagcagccagagaacgaagtgcctcagctcacacccgatgttgagtcggctcttctgcagcaagtcctacaactgacacctgagcagcttagttcgttgccagtagagcaacaacagcaggtgattcagcttcaaaagatgctatcggctggtaaataa</cdnaseq>

Protein Sequence

<aaseq>MAAAAPAGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLV IDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENGRNADRNREKGR GGPGMASSVDTQKQLAGTPVVGDTGLHQPVGLPSAIHAASVMAGILGGSQTANVQNGL PVQYGLGNDPLTHYLARMSKHQLYEIMSELKSLTSQNKDVANKLLQGIPQLSKALFQS QIMLGMVTPQMMQMAKSQQPSSSLAQSSSHISEPFPQPDAMISSVPRPSASLPNPNVL QDPSAQLHNFPQYPHSSQPAGTIFPHGSQSGVGIHPPIVSQLLGASSSVPPLPLATSG SLISQVQPPFMPHHPRPPAMPAGMQQLPLTHPHVPQVPAIPDIAQKEMRFPEQANRST EFAHHPKLRKLEDGTSTPGIVNNNPAVYPAPSQGMLPGGPSGSYNSAAVSFQQPENEV PQLTPDVESALLQQVLQLTPEQLSSLPVEQQQQVIQLQKMLSAGK</aaseq>

Gene Sequence

<dnaseqindica>185..230#617..695#1154..1328#2450..2483#2597..2835#2928..3005#3229..3264#3356..3778#4038..4283#4508..4639#tcatatccgaacgacgccggaaatagcaaaaaaaaaaagaaaagaaaaagaaaaagaaaactcgccgccgccgccgcggccgcgcccccacctcgatctcccgcgtcgccaccccgaacgccgcgccgccgatgctgccgccccgcctccgccgccctgccgccggcgacctctgctgacgagcatggccgccgcggcccccgccggcgcccagaaccgctgcgtcttcggtacgggccccctaccccccgcttccctctcgccgtcttcggcatggttcgatcctgagctgagctccggggagggagctcacggtgtgcgtggggtgcggagtagagagagagcaaaggcggctcggctccttcccgtcgatttgggcctcggctgatttctagcctagccgcctcgctctcctcgatccgtagtgggattgttcgttcttcgtttgggtgtgggtcgatgagagtgaggaggaaaatgaagcgcgttttgctcggttgcggtgctagatttggggagggtttagtgtttgaccaatttggtttggtctagggtttactgctcgtgccctttcgattgacggatgcgtttgttggttgttgaattttggttgcagtcgggaacattccttacgatgcgacggaggagcagctcgtgcagatttgcgaggaagtcggccctgtggtctcattcaggtttaattgtactgcacaaaccctcaaaattgtgtgtgtgtggaattggtgtttaggatggttagagttaagctaaataggttctgcaaatatttggatttgattcagacagacgtgtgttggatactaaagttttgctagtgtctgtttttaaaaataacttcatgccttttattctccttacataataaggagttcaggggtcagtggtatctggtatggacataatgcttggcacacttttttttctatgaaataacattataccgtgcacatttaaaaataatcgctaattgaagtttaatggctgaactacatggtgctactaatatcgctgataactctgaacataggaatgtgccaagtttcctagcagctgcaagtgttttttaatctggtaacacgtggtaagatagtttcgactactcataagctcttaaacatttggtgctttgcagattggttattgataaagaaacagggaagccaaagggttatgggttttgtgagtacaaggatgaggagactgctctaagtgcacgccggaaccttcaaggttatgaaattaatggccgtcagttacgtgttgattttgctgaaaatgggaggaatgctgacagaaacagagaaaaggtcgaagatcctcagtttcttactgtagaagaaacacatttctcaacttccaattcctatgttaagatgagagcttgtattgctttggttcccatgaatgataatagtagtgttttctccaaccaccatgtgtcgtatgtttcacttttgtttgcagcatgtgtatgtatgtacagctgcctggctgtacatacacacacctgctatatctgccaatttatctcgtgaaattatcattctggtatggcgcattatctttggcatctccatttataaaaaagaatatctctgttgtcacatctccttttatttatggaatccgtctgccaaaggctgtttgttgcctagcaaaaccatatatcatcattggaagagcttcgccagaagtgttctgaataaatagcaaaagaagaatagtagtcactaggaaagatgcatctgtagtttcaccttatgcgatatacttgagcaaaaagatgaaactgctagtagaattgagtgctgaaacagtacccaattgaatttttagaaccatttgatatgcagggaatttcacaaagaaataattcaatttccgcatgaaccaggaaattccaaatgagacctttatgtatgtgcagaagggtttacagtttcttttggttttctactgcactggcacaaaaatattcttaatcttctgagatgctatcaacaccagcctttgaatccatcccataccagtgactaatgctgatataagtggaccaatcttctgttgccaaatgtcaatgagcacactaagaaaatgtgcatcacaagttcgcagctggatacagttgactgatgtgtgacttgaaaaatagcgcaatttatacattgttgtacatgtcagtgtggttttttgttctaattatctggagattataatgcagtggtattgtatgatatcactatatgcagaaaactttcaatatactactataaacattgtgtattagatattagctagcttcaatacggtaatgtagttagtgcatgctttcaacaatgaatattattgatttataggattcttgagatcgatttggttttgctagagattctattgacttatgctggatatgtttgtgtattttcagggtcgtggaggacctggaatggcatccagtgttggttggtatcatttcctttatcactcccaagtttatgtgtatgctttactatttctaatctgctgattttatgtttgtggatgctaacactgatctattgatggaatcctgcagatactcagaaacaattagctgggactccggttgtaggcgatacaggtcttcatcagccagttggtcttccatcggctattcatgctgcatctgtgatggctggtattcttggaggatctcaaactgcaaatgttcaaaatggtttacctgtccagtatgggcttggaaatgaccctcttactcattatttggccagaatgtcaaagcaccagttgtatgaaatcatgtctgagttgaaggttatcttgaaatcttaagcactattgtttcttaaatattagaaatggcccagtaccaattgcagtttattaatgtattttttttatggcagtccctaactagtcaaaataaggatgttgccaacaaactgctgcaaggaattccacagctgtcaaaggccctatttcaggttaacttttgctaatattgattttgtacttaatcaactgcttattgtttgttatgagctgattttgtaattggttcatttttatacattagaatacttcttagtcttggttattttcagattattgactggattatttgcacatcgttcagttctaaatctagaattggaataagagattaaaagcctaatggtttcatttttctcccttcttataatgcagtcacaaataatgcttggaatggtgacgccccagatggtatagtctgattttcttctgagcttgtggtacccaatgtattctttgattctgtaacatacagataaccgatgttttattcaaatcacagatgcagatggcaaagagccaacagccctctagctccttggcacaatcatcatctcacataagcgaaccatttccacagccagatgctatgatatcaagtgttccaagaccttctgcaagcttgccaaacccaaatgtcctgcaggacccttctgcacagctgcataattttcctcagtatccgcattcatctcagcctgcgggcacaatatttccacatggaagtcagtctggggtgggcatacatcctccaattgtatctcaactccttggtgcctcttccagtgttcctcctctaccccttgctacctcaggaagcctgatatcgcaggttcagcccccatttatgccacatcaccctaggccaccagctatgccagcgggtatgcaacaactaccattgactcatccacatgttccccaggtatttttcttcacttctaaaggaacctttgtaattcaatcaactttgtgttaatttatgataaaccaaatatttgagataaccaatgcagagcctctgggaacctttatgctcaaacagcacaagttacttagctaggcattgtcgatgccatagatgaactaaattgttattccaagttatgaggcacaagctgtagacaatatgcacttttcatttaattacccgcacatgccaactcagtacggcccaattacaggtacctgctatacctgatatagcacagaaggaaatgaggtttcctgagcaagcaaatcgttcgacggagtttgctcatcatccaaagttgcgaaaattggaggatggaacatccacacctggaattgtaaacaacaatccagctgtttatcctgctccatcccaaggaatgctccctggtggaccatcagggagctataattctgctgctgttagcttccagcagccagagaacgaagtgcctcaggtactccctataatttaatctcccggtgtttattgttattttatccttttagaatttgattgttcagtatgaggaactgttgacaatcttaagagacatgacttatgtgaagttctaaacggttgttttcatttttgtggaattgcattgaattgccccgaatctctgaacactatgataattttcatgcgcttacaaataaagttgttcttgctctgttccagctcacacccgatgttgagtcggctcttctgcagcaagtcctacaactgacacctgagcagcttagttcgttgccagtagagcaacaacagcaggtgattcagcttcaaaagatgctatcggctggtaaataacccccatctgaatcagcataccaaattgttgatcaagctatacagagttgtggaaaaaatggtacatttgtgaagaagaaactgggcgcatatgtcaacggttgattttgccaagccacaccaccacacttgtaactttgaaaattgttggcatttctgggccattagttttgctcaggagcattctttggagataaaatgtgatgggaaaaggcctcttattgtccatcacttatgtatcattatagaaaaaaagaataatctgtatccatttttctcatgtaatctgtagtgcaagaacaattttgtctttagaactctcttaaaagtagtccagagctgtttagtttgctgtgtaatctcccagcatcttactttctctgtagctgtttcttctctcccggactacatgttttgaagttagttgctcagatattcgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0176100, RefSeq:Os11g0176100