BGIOSGA033551

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Revision as of 08:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033551| Description = BGIOSGA033551| Definition = Oryza sativa Indica Group BGIOSGA033551, complete gene.| tag = | tid = BGIOSGA033551-TA|...")
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Gene Name

BGIOSGA033551

Description

BGIOSGA033551

Definition

Oryza sativa Indica Group BGIOSGA033551, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033551-TA

Ensembl Protein ID

BGIOSGA033551-PA

Length

3007

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22280196..22283202

Sequence Coding Region

22282978..22283202,22281870..22282808,22280196..22280237

Genome Context

<gbrowseImage1> name=IndicaChromosome11:22280196..22283202 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:22280196..22283202 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCAACTGGGAAGAGTGGTTCTTTATTGATGAAGCAACGTCAATTGCTAAGGAAAGGGTTGATGATGGAGATTCTGCAATGCCAAAAGAGAAAGCCTTACCTCCAAGGATGCAGATACTGTCACGGTTGAGGAGGCTGGAACTTTCTGGCTGCCCAAAGCTGAAAGCTCTTCCACGGCAGCTTGCACAGATTAACAGTCTGAAGGAGATAGAGCTAAGATGGGCGGCTGGTCTTCTTGATACACCAATAAATAAGGTTCCAAAAGGGATAGGAAGACTGCAATTCCTTAATGATTTGGAAGGATTTCCTATNGGAAGTGTAACTTACAATAAAAAAATGCAAGATGGATGGAATTTGGAAGACTTGGCTGATCTTTCACAGTTGAGGCGGCTTGTTATGGTAAAACTAGAAAGATGTACTCCTTGCAGCAGTGAAGATTCATTTCTCCTAACAAACAAAGAACATCTGAAAGTTCTATATCTAGAATGCACTGAACCAACAAATGAAGCATGTTCAGATGAACATGTTAAACATGTTGAGAATATCTTCGAGCAGCTAGTCCCTCCACAGAACTTGAAAGATCTATCTGTTCTGAGATTCCTTGGTCAGAACTTACCCTCCTGGCTTTGTAATGTCTATCTACCTTCACTGAAATATTTGATCCTCTCTGATTGCAAATCTTGCATACATCTTCCACCAATATGGCAGCTACCCAACTTGGAACGCCTGAAAATTGTGAAAGCAACTGCAATTACCAAGATCGGACCCGAATTTATTGGGCAATTTCCAAGATCCAGGGAAGCAGTTGCTTTCCCCAAGCTTGAATGGTTGATCATCAATGATATGCCCAACTGGGAGGAATGGGCCTTTACTGAAGAAGATGAGATATCACTTGCAGCAATGAAGGAAGGAGGAGGGGATGGAACTGCTGTGGCCGAAGAGGAGGAGATATCACTTGCAGCAATGAATGAAGGAGGAGAGGATGGAACCACTGTGACGGAAAAGGGGGAAGCCTCATTTCCAAGGTTGTGTGTGCTGCCCTCTTTGAAGAGGTTGGACATTGATAACTGCCCCAAGCTGAGGGCTCTCCCACAACAGCTTGGACACGAGGCCACCAGTTTGAAAGAGCTCTCCCTTGTAGCAGCAAGCTGCTTGAAGTCGGTTGTTAATCTTGAAGAATTTGGGCTGTGCAGTCACTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MPNWEEWFFIDEATSIAKERVDDGDSAMPKEKALPPRMQILSRLRRLELSGCPKLKALPRQLAQINSLKEIELRWAAGLLDTPINKVPKGIGRLQFLNDLEGFPXGSVTYNKKMQDGWNLEDLADLSQLRRLVMVKLERCTPCSSEDSFLLTNKEHLKVLYLECTEPTNEACSDEHVKHVENIFEQLVPPQNLKDLSVLRFLGQNLPSWLCNVYLPSLKYLILSDCKSCIHLPPIWQLPNLERLKIVKATAITKIGPEFIGQFPRSREAVAFPKLEWLIINDMPNWEEWAFTEEDEISLAAMKEGGGDGTAVAEEEEISLAAMNEGGEDGTTVTEKGEASFPRLCVLPSLKRLDIDNCPKLRALPQQLGHEATSLKELSLVAASCLKSVVNLEEFGLCSHL</aaseq>

Gene Sequence

<dnaseqindica>1..225#395..1333#2966..3007#ATGCCCAACTGGGAAGAGTGGTTCTTTATTGATGAAGCAACGTCAATTGCTAAGGAAAGGGTTGATGATGGAGATTCTGCAATGCCAAAAGAGAAAGCCTTACCTCCAAGGATGCAGATACTGTCACGGTTGAGGAGGCTGGAACTTTCTGGCTGCCCAAAGCTGAAAGCTCTTCCACGGCAGCTTGCACAGATTAACAGTCTGAAGGAGATAGAGCTAAGATGGGTAAGCAGCCTGAAGGTGGTGGAGAACTTCCCCCTCCTCTCTGAGACGCTTTTGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCAAAGGTGTAAATCTTGTACAGGCTTCCTTGGCAACCACGAAACTATGCAATTTAAGGCGGCTGGTCTTCTTGATACACCAATAAATAAGGTTCCAAAAGGGATAGGAAGACTGCAATTCCTTAATGATTTGGAAGGATTTCCTATNGGAAGTGTAACTTACAATAAAAAAATGCAAGATGGATGGAATTTGGAAGACTTGGCTGATCTTTCACAGTTGAGGCGGCTTGTTATGGTAAAACTAGAAAGATGTACTCCTTGCAGCAGTGAAGATTCATTTCTCCTAACAAACAAAGAACATCTGAAAGTTCTATATCTAGAATGCACTGAACCAACAAATGAAGCATGTTCAGATGAACATGTTAAACATGTTGAGAATATCTTCGAGCAGCTAGTCCCTCCACAGAACTTGAAAGATCTATCTGTTCTGAGATTCCTTGGTCAGAACTTACCCTCCTGGCTTTGTAATGTCTATCTACCTTCACTGAAATATTTGATCCTCTCTGATTGCAAATCTTGCATACATCTTCCACCAATATGGCAGCTACCCAACTTGGAACGCCTGAAAATTGTGAAAGCAACTGCAATTACCAAGATCGGACCCGAATTTATTGGGCAATTTCCAAGATCCAGGGAAGCAGTTGCTTTCCCCAAGCTTGAATGGTTGATCATCAATGATATGCCCAACTGGGAGGAATGGGCCTTTACTGAAGAAGATGAGATATCACTTGCAGCAATGAAGGAAGGAGGAGGGGATGGAACTGCTGTGGCCGAAGAGGAGGAGATATCACTTGCAGCAATGAATGAAGGAGGAGAGGATGGAACCACTGTGACGGAAAAGGGGGAAGCCTCATTTCCAAGGTTGTGTGTGCTGCCCTCTTTGAAGAGGTTGGACATTGATAACTGCCCCAAGCTGAGGGCTCTCCCACAACAGCTTGGACACGAGGCCACCAGTTTGAAAGAGCTCTCCCTTGTAGCAGCAAGCTGCTTGAAGTCGGTGAAGGACCTTCCATCCCTATCTGGTTTCCTTTCTGTTTGTAGATGTGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAAGACCCAACTAAAAGACAGTAGATTAGTAGAGACACAAGGTAAGGGCATGGCTTTGTATTTGTTGATACATATTTTTATTCTATCGTTATCTAAAATAGTGGAAACATATTTTAATTTCATTCCAACTTTGCATATTTTCAGCCAAAATCATGCATGTCTAATGTTATTCTCACCTGTACACTTTACATTCATTGATGTTGTACACTTTGCATCATTCTTAGTAAGGAGATCATCATATATATTAGACAAAATGTCAAACTTTCGGTAGTTGTTATGATTAATATTTGTAGCTATATTACTGACCTTGTCACCTAACACTAGTACAGAAATCCTTAAAACTTTGTGTTGTAATTATTCTCAATGTCCATAACCAGTACAGAAACAAGTGTTATAGCATTTTATAATCTATTATATCCTAAAGTACATTAAACCTCCTACAAACGCTTCTAAGCCATCACGTAGCACTCCTACGAACACTCCTAAGCCTCCACATGACATTCTAATAAATTAAAGAAATTTCTAAAAATTCCGAGAAAAACAAAAACATCTTGTCATTTATCTTTATTAAATCTGGTGAACCCATCATTTACAACCATTAGATCTAGTCGTCAACCCGTGCATTGTATGGGTTATTAAAATATTTAAGAAATTCAATTGTACATGTGGTTGAATACATGGGTTAAAATGATTATTTAGCTTACAAAAATGTTGGAATGGCGGCATTCGGACATCCGGTCTCTTGTACTTTACCATGATTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAATTTAGGAAATATACGAAATATATTAGAAAATATATGGTAAAAATAGGATAAAATATGAAAAAAAATAAAAAAAATATGAGAAAAATATGGGAAAAATTAGAAAATTGTAGGGAAAATAAATGGGCAGCTGGGCCGTGCTCGTGCCGACCCGTCAACAGGCATGCCGTGCCGTGTAAGCCCATGGGCTAAGGTGCTGGCCCAAGCACGACACGGACAAATGGGCCATGCCGGCACAGCACACAGTCCGCCCAACATCTGTTCCTAGTGTAGGGCTCCTAATTAATTAAGGTTTGTTTGGTGAAACAAAAAAGCCACCTAAATGTCTTTGTATTGGTTCAAATTGATTAATAGTTTTGTTCGTGTTCTACCTGTTAAAAGAAGAAGAGGATATTGCTGATCGACATGCCTATGTATAGTCCATGTGTGTCTTTTCCTTATGCCTTTTGTAATGCACGTGTATTGTTTGGTAAGTTCAATTCCAGAAAATATGATTGTTGAAAAACTGATAGCACATATATTTTCTTTTCCTTAATTAAGTTATTAAATTACCAAAATACTTATGTATATATACATCCATGATTAATTTCTGTGTGCTTATTTATTTTGTAGGTTGTTAATCTTGAAGAATTTGGGCTGTGCAGTCACTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033551