BGIOSGA033574

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Revision as of 08:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033574| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033574, complete gene.| tag = OS11G06...")
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Gene Name

BGIOSGA033574

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033574, complete gene.

LocusTag

OS11G0687000

Ensembl Transcript ID

BGIOSGA033574-TA

Ensembl Protein ID

BGIOSGA033574-PA

Length

5444

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21766462..21771905

Sequence Coding Region

21771091..21771905,21766462..21769048

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21766462..21771905 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21766462..21771905 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCTGCCGTGGCGAGCGCATTGCTGAAGAGCGTCATGGGGAGGCTCTTCACGGTGCTAGAGAAGGAGTACAGCAAGCACAGGGAGCTGGCTCAAGAAACCAACTCCCTCCAGCAGGACCTCCGCATCGTTGCGGCGGCCATGGACGACCAGCTCCTTTCCATCAGGAGGAGCGACGCCCGCACGGCCGTCGCGCGGCTGCACAGCAAGGAGATGCTCGATCTTGCGCATGACATCGAGGACTACGTCGACCGCTTCATCCACCATCTCACTTGCAGGCAGCAGTGTGCTAGTGCCGGCCGGAACTCCCTTCTGGACCGGGTCGCCCACGAGCTCAAGAAGGTTCAGAGCCGCTCGAGCTTCGCCAACGAGATCCAGAAGCTCAAGAGGCGCCTCAGGCAAGTGCACCAGGATGTCATCAAGAACAATCCACTGGCTGGTGGTCAATCATCTTCCCCGTCTCCGCAAGATCGTCGCATCGCGGATAACCCGGTGGGCATAGAGGAGCCCGTGGAGGAGCTCCTCTCGCTGCTGGATGAGGTTGAGGGTGAGCCGGAGCGAATGAGGGTCATCTCCATCGTGGGATTCGGTGGATTGGGGAAGACAACCCTCGCCAAGGCGGTCTATGATAGCCCTCGCGTGAAGGAGAAATTCCACCTCCGTGCATGGGTTCCCGCCGGTGCCTCGCCGGAGACAAGCAGTGGGATGAGGGGGATCTTGCGTGCTGTGATACAGAAAATTCTTCCCAATGTTGCCATGGATGTTGACGGCCAACTTGAAACCTCGCTCAAAGAATACCTCAAGGACAAGAGGTATTTAATTGTGATCGATGACATCGGGATGGATCAATGGAGCATCATAAGTTCCACCTTTAAGGACAACGGTACAAGCAGCAGAATAATACTGACCACAACTATTCAATCAATAGCTAATAGCTGCAGCCATGGCAATGGTTATGTGCACCAAATGAACACGCTTGGTGAAGAGGACTGCAAGGAAATAGCCTTACCAACTGGGATAAGATCACCTGAGTTGGAGACTGGTTCAGTACCATTATTAGGCAAATGTGATGGCCTTCCTCTTGCTCTGGTCAGTGTATCTGATTATCTGAAGAGTTCGTGTGAGCCCACAGGAGAGCTGTGTGCAAACCTGTGCCGCAACCTCGGTGCTCATCTGAAAGAGCAGGATGGCCATCCCAGCTTTTCAGAACTCAGGAAGGTGCTTCTTGACAACTATGACAGTTTATCCGGCTATGCTCTCAGCTGCTTGCTGTATCTTGGTATATTCCCAAGCAATCGTCCTCTGAAAAAGAAAGTTGTAATCAGACGGTGGTTGGCTGAAGGATATGCAAGAAGTGATTCTCTTCGCAACGAAGAGGACATTGCAGTTGAGAATTTCAATAAGCTTATTGATCGGAATATCATTCTGCCTGTTGACACAAGAAACAATTCAGACGTGAAGACGTGCAAAACTCATGGAATTATGCATGAGTTTTTGCTGAACATGTCCTTGGCCCAGAGATTCATCATGACATTGTCTCGTGATCATCCAAGACTCATCTCCAATGCACGCCACCTTTCTGTCCATGATGGTGAACTGACAGGATACGTGACATCTGATGAAGAATTTTCTCGTGTCCGATCTCTAACTGTATTCGGGGATGCAAGTGATACAGTCTCTTATGTTCGGAAGTGCAAGCTAATACGAGTACTGGATTTACAAGAATGTAATGATTTTGCTGACGATCATCTGAAACACATATGCAAATTATGGCATCTGAAATACCTGAGCTTTGGGTACAATATCAATGTGCTTCCAAGGAGCATTGAAGGACTGCATTGTTTGGAGACACTAGATTTAAGGAGAACCAAGATCAAGTTTTTGCCCATTGAAGCTGTCATGCTGCCCCACTTAGCTCACCTGTTTGGAAAGTTTATGCTGCATAAAGATGACCTGAAGAATGTCAACAAGATGAGTAAACTAAATCCTTGCAAGAAACAAAAAAAAGGGATGAATATACTACCAAAATTCTTCACATCAAAAAAGAGCAACTTGCAAACTCTAGCAGGTTTTATCACTGGTGAGAACGAAGGATTTCTGCAACTTATGGGTCATATGAAAAAACTGAGAAAGGTTAAGATATGGTGCAAGCATGTTGCAGGTAGCAGTAATTATATAGCTGATCTTTCACAGGCCATTCAGGAATTCACCAAGGTTCCTATTGACAGTGACAGTAACCGTTCTCTCTCACTTGATTCTGAAGAATGCTCTGAAAATTTCCTGAGCGCACTTCACTTGGAGCCATGCTCAGAAGATTTCAAATACCATCTAAGGTCACTAAAGCTGCAAGGCAGGTTCCTCCGATTGCCTTCATTTGTTACCTCGCTGTCAGGCCTCACGGAGCTTTTCATTTCATCAGCTACGCTGACACAAGATCATCTATCAGCACTGATCACTCTGAACAGACTTCTCTACCTCAAACTGATTTCAGACAAACTTGAGAATTTTGAAATGAAACATGGGGCATTCCCGAGCCTGCGACGCCTGTGCTTTGTGGTTAAAAGTGTCACTTCAGATTTGCCAACAATCAAGCAAGGAGCTCTGCCAAACCTTGTCTCACTTCATCTGCTCTGTCGAGGTTTAGTCGGACTATCCGGCATCGAGATCAGACACCTGAAACATCTCAAGGAAGTCGTGATTGACTCTGACGTGACTCCACAAACAAAGCAAGACTGGGCACACGCAGCAAAAAACCACCCGAATAGACCTAAATTTTCATGGCCTCGAAAGGTTGATTTAGTGGAAAGCGAGGAACCGGCAAAACATCTTAAGACAGAGAAGAGGAAATATTGTCCAAATTATGAACTGGATTATAATCTTCAGGAGATGAGACTATCAGAGAGTAGAGACCATAAGAGGCAGAAAATTGGAGAAGGTGATACTAGCAAAAGTTCTGTGGGTCTTGTATATCCTATGTATGGAGATGTTGAAACTGATAGAACACAAGTTCACTTATTTAACCAAGAGACAAGAAGGTACGATCGGACTGAAGTTGATCAGAAGTGTCCTGAAATGTTGCAGGAATACAAAGATAAACACTCCATGGTGGTGGATGTTGATTTGAGATCAGATGAACAAGTCAATCCTCCCCATCCCAAGTTGAAGAATCTGATGCCTGGGAAGGAATATGATCGACAGGAGCTGATACCAACAGAGGGAGCAAAAGTGGGCCAATGCCAATCAGGTGGTGATGAAGATCAAATTGTTCATAACACTAATGGCAAGAAGGTTGTTGTGCAAGCCAATCATTTCTTTGAACAAGAGGACCAGGGCTCTCAAGTAACAATGTCATATGAATCAAGTTCTCTCTTGTCACACATGGATACTAAATCGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MESAVASALLKSVMGRLFTVLEKEYSKHRELAQETNSLQQDLRIVAAAMDDQLLSIRRSDARTAVARLHSKEMLDLAHDIEDYVDRFIHHLTCRQQCASAGRNSLLDRVAHELKKVQSRSSFANEIQKLKRRLRQVHQDVIKNNPLAGGQSSSPSPQDRRIADNPVGIEEPVEELLSLLDEVEGEPERMRVISIVGFGGLGKTTLAKAVYDSPRVKEKFHLRAWVPAGASPETSSGMRGILRAVIQKILPNVAMDVDGQLETSLKEYLKDKRYLIVIDDIGMDQWSIISSTFKDNGTSSRIILTTTIQSIANSCSHGNGYVHQMNTLGEEDCKEIALPTGIRSPELETGSVPLLGKCDGLPLALVSVSDYLKSSCEPTGELCANLCRNLGAHLKEQDGHPSFSELRKVLLDNYDSLSGYALSCLLYLGIFPSNRPLKKKVVIRRWLAEGYARSDSLRNEEDIAVENFNKLIDRNIILPVDTRNNSDVKTCKTHGIMHEFLLNMSLAQRFIMTLSRDHPRLISNARHLSVHDGELTGYVTSDEEFSRVRSLTVFGDASDTVSYVRKCKLIRVLDLQECNDFADDHLKHICKLWHLKYLSFGYNINVLPRSIEGLHCLETLDLRRTKIKFLPIEAVMLPHLAHLFGKFMLHKDDLKNVNKMSKLNPCKKQKKGMNILPKFFTSKKSNLQTLAGFITGENEGFLQLMGHMKKLRKVKIWCKHVAGSSNYIADLSQAIQEFTKVPIDSDSNRSLSLDSEECSENFLSALHLEPCSEDFKYHLRSLKLQGRFLRLPSFVTSLSGLTELFISSATLTQDHLSALITLNRLLYLKLISDKLENFEMKHGAFPSLRRLCFVVKSVTSDLPTIKQGALPNLVSLHLLCRGLVGLSGIEIRHLKHLKEVVIDSDVTPQTKQDWAHAAKNHPNRPKFSWPRKVDLVESEEPAKHLKTEKRKYCPNYELDYNLQEMRLSESRDHKRQKIGEGDTSKSSVGLVYPMYGDVETDRTQVHLFNQETRRYDRTEVDQKCPEMLQEYKDKHSMVVDVDLRSDEQVNPPHPKLKNLMPGKEYDRQELIPTEGAKVGQCQSGGDEDQIVHNTNGKKVVVQANHFFEQEDQGSQVTMSYESSSLLSHMDTKSL</aaseq>

Gene Sequence

<dnaseqindica>1..815#2858..5444#ATGGAGTCTGCCGTGGCGAGCGCATTGCTGAAGAGCGTCATGGGGAGGCTCTTCACGGTGCTAGAGAAGGAGTACAGCAAGCACAGGGAGCTGGCTCAAGAAACCAACTCCCTCCAGCAGGACCTCCGCATCGTTGCGGCGGCCATGGACGACCAGCTCCTTTCCATCAGGAGGAGCGACGCCCGCACGGCCGTCGCGCGGCTGCACAGCAAGGAGATGCTCGATCTTGCGCATGACATCGAGGACTACGTCGACCGCTTCATCCACCATCTCACTTGCAGGCAGCAGTGTGCTAGTGCCGGCCGGAACTCCCTTCTGGACCGGGTCGCCCACGAGCTCAAGAAGGTTCAGAGCCGCTCGAGCTTCGCCAACGAGATCCAGAAGCTCAAGAGGCGCCTCAGGCAAGTGCACCAGGATGTCATCAAGAACAATCCACTGGCTGGTGGTCAATCATCTTCCCCGTCTCCGCAAGATCGTCGCATCGCGGATAACCCGGTGGGCATAGAGGAGCCCGTGGAGGAGCTCCTCTCGCTGCTGGATGAGGTTGAGGGTGAGCCGGAGCGAATGAGGGTCATCTCCATCGTGGGATTCGGTGGATTGGGGAAGACAACCCTCGCCAAGGCGGTCTATGATAGCCCTCGCGTGAAGGAGAAATTCCACCTCCGTGCATGGGTTCCCGCCGGTGCCTCGCCGGAGACAAGCAGTGGGATGAGGGGGATCTTGCGTGCTGTGATACAGAAAATTCTTCCCAATGTTGCCATGGATGTTGACGGCCAACTTGAAACCTCGCTCAAAGAATACCTCAAGGACAAGAGGTGGGTGCACATTTTTCATTTTCCAGATCTGAATACCTCAATGATCCCTTTTCTATTACCTAGCACTCCAATCCAAATGATTGCTAACTAATATTTACTCCCTCCATCCAAATATAAGCACTTGTGGGTCTTTTTAGAGAGATTAGGGATGGGGAGAATAGACTACACTGCCCTATATCTATTATCTATCTATCTTCTATTATATACTAAAAGTCCATTAAACTTTCTACAAACGCTCCTAGGCCACCACGTGGCATCCTATAAACGCTCTCGAGTCGCCACGTGTCACTCTAATAAAATAGAAAAATCCGACCATTGATTTTCATTTAAATTGGTGGACCCATTAATTTTGATCGTTAGATTTATCTCTCCATTATTAAAACAAAATCTTCGTCCATCTACGTACGCCTCCACAGCATATGCACTACTCATCTTCACAATAATGTAGGTACGATCCCTCCGTTTCATTTTTTTTCGTTTTTTATTTTCATAATAATTAAAATTAAAAAAATTACAGGCCTAAAAAGCCAATCAACCTACTAGATCTATTTAGCTCTTCCTCTAGCCTCTCCTAATAAGTTCATTACACATCATATAAATTTTTCTATACACCTATATAACACTCCTAAATTAGAAAAAAATATAAAAATATATAAAACATTTGACCAATGGTTTACATTATTTTAGGCTATTAGATACATCTTTTTCTTTAAAAAAAAATCCCAAACTCCCTCCACGCTCCTATGTGGCGTTGAAACCCATTAACCGTCCTTATAAATGTTTCTAAAACACTGTGACACTTCTAAATTTGAGAAAATCTTAAGAATCTAAGAACAGAACATCTAATCATTGGTTTCGACTTAAACCGATGGACATACCATTTAGGTTGTTATTAGATTTTTATTTTAAATAACATCAAACCTCCTTTCCACGCTCCCCACCCAAACAATGTTAAAGACTTATACATTAAACATCCTACAAATATTTCTAAGCCACTACGTGTCTCTCTTGAGTTAAAAGAATCATACAAAATTATGACAAAAAAACAAAACATCTAACTGTCAGTTTCGACTTAAACATCACACACCAATCTTTAGTCTACCATTAAAATGTTTGTCATTATAACATGTGCCGGCATGGTATGTATAAAGATGGTATGCATGCTAATTAGCTAGCAATAGTTTATTATTTACTCCATGCATACGTTTTTATGAATTTAACCCATCTTCTATTTAAAAATCAATAAAATGACTTTTGGGATTTGTTAAAAAAGATCAAAACCCCTGAATCATATTAAAAGAATATTGTCGGACCTTAATTTAGTTTGCCTCTTAATCTATAAAACATAATTTCCGAAGAAACTATCATCTTACGTTCCAAAAATACAAATGCTCATGCATATGCACGGGCCACCTTCCTAGTTTCTAGACAAATTTCTAATGCTAAGAGTCTTTATATTTTGTTTATGGAGAGAGTAGTCGCTGAGTTGTGCGCTCTATCGAATGTTATTACTATATTATAATTATTAAAAGTTCATATGTTTAATATGGATTGTAGAGGCTGGGTAAAAAAATACCCTTCACTAAAAAAATATGTTTGATATGGATGCCATTTTCTGAATGGTTTATAGTTACAAAGAATAGAGTAGACCATTTACAGCTTTCAAATTATTTATTTTTAAATTTAAAATTAGATTAATAAAATACTAAATGGAGAGCCTAAGATTAATACCGTTTTTATATTTGTTCATTCCATATTTTAGAATTACTAATTTCATAATAACTAAACATAAACAGTACATAGTGTTTCAAGTTTTATTTAATATGTATAAGGGAAAGGATACATGCGCATAGAAAGTATTTTACAAGTGTTCAAAAGATACTGATGTATCATGCTATGATTAGATCTTGATTTTTTAAAAAATTTTCAACTAATGGAATTAAACGGTTGAGATGCTTGTTAGTAGGAACTTTGTAACAAATTGTGATAATGAGATCCATGACATCAATGTTGCTTCTATAATTTCTCAATTCCGTTAATAGGTATTTAATTGTGATCGATGACATCGGGATGGATCAATGGAGCATCATAAGTTCCACCTTTAAGGACAACGGTACAAGCAGCAGAATAATACTGACCACAACTATTCAATCAATAGCTAATAGCTGCAGCCATGGCAATGGTTATGTGCACCAAATGAACACGCTTGGTGAAGAGGACTGCAAGGAAATAGCCTTACCAACTGGGATAAGATCACCTGAGTTGGAGACTGGTTCAGTACCATTATTAGGCAAATGTGATGGCCTTCCTCTTGCTCTGGTCAGTGTATCTGATTATCTGAAGAGTTCGTGTGAGCCCACAGGAGAGCTGTGTGCAAACCTGTGCCGCAACCTCGGTGCTCATCTGAAAGAGCAGGATGGCCATCCCAGCTTTTCAGAACTCAGGAAGGTGCTTCTTGACAACTATGACAGTTTATCCGGCTATGCTCTCAGCTGCTTGCTGTATCTTGGTATATTCCCAAGCAATCGTCCTCTGAAAAAGAAAGTTGTAATCAGACGGTGGTTGGCTGAAGGATATGCAAGAAGTGATTCTCTTCGCAACGAAGAGGACATTGCAGTTGAGAATTTCAATAAGCTTATTGATCGGAATATCATTCTGCCTGTTGACACAAGAAACAATTCAGACGTGAAGACGTGCAAAACTCATGGAATTATGCATGAGTTTTTGCTGAACATGTCCTTGGCCCAGAGATTCATCATGACATTGTCTCGTGATCATCCAAGACTCATCTCCAATGCACGCCACCTTTCTGTCCATGATGGTGAACTGACAGGATACGTGACATCTGATGAAGAATTTTCTCGTGTCCGATCTCTAACTGTATTCGGGGATGCAAGTGATACAGTCTCTTATGTTCGGAAGTGCAAGCTAATACGAGTACTGGATTTACAAGAATGTAATGATTTTGCTGACGATCATCTGAAACACATATGCAAATTATGGCATCTGAAATACCTGAGCTTTGGGTACAATATCAATGTGCTTCCAAGGAGCATTGAAGGACTGCATTGTTTGGAGACACTAGATTTAAGGAGAACCAAGATCAAGTTTTTGCCCATTGAAGCTGTCATGCTGCCCCACTTAGCTCACCTGTTTGGAAAGTTTATGCTGCATAAAGATGACCTGAAGAATGTCAACAAGATGAGTAAACTAAATCCTTGCAAGAAACAAAAAAAAGGGATGAATATACTACCAAAATTCTTCACATCAAAAAAGAGCAACTTGCAAACTCTAGCAGGTTTTATCACTGGTGAGAACGAAGGATTTCTGCAACTTATGGGTCATATGAAAAAACTGAGAAAGGTTAAGATATGGTGCAAGCATGTTGCAGGTAGCAGTAATTATATAGCTGATCTTTCACAGGCCATTCAGGAATTCACCAAGGTTCCTATTGACAGTGACAGTAACCGTTCTCTCTCACTTGATTCTGAAGAATGCTCTGAAAATTTCCTGAGCGCACTTCACTTGGAGCCATGCTCAGAAGATTTCAAATACCATCTAAGGTCACTAAAGCTGCAAGGCAGGTTCCTCCGATTGCCTTCATTTGTTACCTCGCTGTCAGGCCTCACGGAGCTTTTCATTTCATCAGCTACGCTGACACAAGATCATCTATCAGCACTGATCACTCTGAACAGACTTCTCTACCTCAAACTGATTTCAGACAAACTTGAGAATTTTGAAATGAAACATGGGGCATTCCCGAGCCTGCGACGCCTGTGCTTTGTGGTTAAAAGTGTCACTTCAGATTTGCCAACAATCAAGCAAGGAGCTCTGCCAAACCTTGTCTCACTTCATCTGCTCTGTCGAGGTTTAGTCGGACTATCCGGCATCGAGATCAGACACCTGAAACATCTCAAGGAAGTCGTGATTGACTCTGACGTGACTCCACAAACAAAGCAAGACTGGGCACACGCAGCAAAAAACCACCCGAATAGACCTAAATTTTCATGGCCTCGAAAGGTTGATTTAGTGGAAAGCGAGGAACCGGCAAAACATCTTAAGACAGAGAAGAGGAAATATTGTCCAAATTATGAACTGGATTATAATCTTCAGGAGATGAGACTATCAGAGAGTAGAGACCATAAGAGGCAGAAAATTGGAGAAGGTGATACTAGCAAAAGTTCTGTGGGTCTTGTATATCCTATGTATGGAGATGTTGAAACTGATAGAACACAAGTTCACTTATTTAACCAAGAGACAAGAAGGTACGATCGGACTGAAGTTGATCAGAAGTGTCCTGAAATGTTGCAGGAATACAAAGATAAACACTCCATGGTGGTGGATGTTGATTTGAGATCAGATGAACAAGTCAATCCTCCCCATCCCAAGTTGAAGAATCTGATGCCTGGGAAGGAATATGATCGACAGGAGCTGATACCAACAGAGGGAGCAAAAGTGGGCCAATGCCAATCAGGTGGTGATGAAGATCAAATTGTTCATAACACTAATGGCAAGAAGGTTGTTGTGCAAGCCAATCATTTCTTTGAACAAGAGGACCAGGGCTCTCAAGTAACAATGTCATATGAATCAAGTTCTCTCTTGTCACACATGGATACTAAATCGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033574