BGIOSGA033582

From RiceWiki
Revision as of 08:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033582| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033582, complete gene.| tag = OsI_369...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033582

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033582, complete gene.

LocusTag

OsI_36935

Ensembl Transcript ID

BGIOSGA033582-TA

Ensembl Protein ID

BGIOSGA033582-PA

Length

3893

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21652337..21656229

Sequence Coding Region

21656224..21656229,21655967..21656052,21655826..21655874,21655591..21655640,21654423..21654916
,21654069..21654229,21653597..21653806,21653322..21653514,21653170..21653247
,21652964..21653058,21652337..21652459

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21652337..21656229 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21652337..21656229 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTACGCAAAGAGAATATTATTTCCCAGGAAAAGGTGCTCCAAGCATTTGATAATGCCCTTCAGAAGCATCTTAATCCAATTCATCGATCCCTTGAATCCCTTACCGGACGAATTGATACTCTGACTCATGAAGTGGGACAGATCAAACAATCAAACCCTAACCATCATGCGAATGAGCATTACAGATCAGAAGCAAATCAAGATGCTGCTGGATTTGCTCATTATGGGGAAGCTGTTGAGTTGAGATTCCTCAATAAGTTGAAGCCTCGTCTTTATTATACACAGGAAAAAATTACAGCAGAGGATGGCACGGCTATCCAAATTGCCTTATTTAAGGATAACCAGATAGTTAAATCCGGTCCACTTTCTTCTGCAAGAATTGAATTTGTGGCTCTTGAAGGTGACTTTAATGATGTTGCCCCTGAAAATTGGACCGAGTATATGTTCAATCAGAACATAGCAAGATCCCCAAAAGGGCCTGTGTTAGGAGGAGTTTGTCAAATCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGGCATCTCTTTCGTTGTACCATCTTCAAAGAGTAGAAGCGGAATGTTCATTCTGGCAGCAAGAGTTCATAGCAGTGACAAAGCCGGGTTCCGGATTATGGAAGCCTTGATGAATCCTGTTGAGGTGCAGGTTTACCGAAACAAAGCAAATAAAAATAGTGACACTCCAAAATTGAAAGATGACGTATACCATTTAAAGGGAATTTCAAAAAAGGGAACTCGCTTCGATTGGCTTAAACATAATGGGATCAACACTGTGGAGGATATGTTGAAGGCTTTAAATAAGAACGAAAAGAAGATTCGCACTGAGTGCTTCAAGCTAAACAAGAGCAGCAAGGATTGGAAAGAAATAGTTAAACATGCTAGAAAGTGTGATCTCGAAGGCAATTGCAACCTGAAATCATATAGAGTTGAAGAGAAACATGTTGTACTATTCTTTAACTGCGTACATGATCTCGTTGGAGCACAATTTCATGATGGCTATGTTACAAAGGACAATTTCAATTCAGATCAGCAGGATGCCGTGAATTGTTTGAAAAAACAAGCGTATGATGCTCTGGATGACATTGCCTTCGATGACAAAATGAAAGACAACTATCCAGTATCTTTGTCTTCAGCTATGAACACAAGCATTACTGATGGTGATGCTTCCATTCCCTTAACAGACAGAGCAGGAACAAATTATCCAGACCTCCATGTTACATCTCAAGCAGTTGGGAATTCTCATCATGCTGAGATTTATCAAGAACCTGAACTGCTTCAAGCATTGCTGAACTATAATAGTGCCTATGAAGGTTATCGAGCAGGTGCTGTGGCTCAGATCTTCGGTGGATTTTCTGAAGTTGACATCCCTATTGGGTGCTATACTGGTCAGGCATCTGAAGGTACTTCTTCTGGAGGCAATGCCTTGATCGGACTGATGAATATGTCACAGAATGGCAGCGATGGCAGCAATATTGCAGAACTGATTGACAACGACATTGATCCTTATCAGTACATCATTTAA</cdnaseq>

Protein Sequence

<aaseq>MDVRKENIISQEKVLQAFDNALQKHLNPIHRSLESLTGRIDTLTHEVGQIKQSNPNHHANEHYRSEANQDAAGFAHYGEAVELRFLNKLKPRLYYTQEKITAEDGTAIQIALFKDNQIVKSGPLSSARIEFVALEGDFNDVAPENWTEYMFNQNIARSPKGPVLGGVCQIKLKNGEASPSGISFVVPSSKSRSGMFILAARVHSSDKAGFRIMEALMNPVEVQVYRNKANKNSDTPKLKDDVYHLKGISKKGTRFDWLKHNGINTVEDMLKALNKNEKKIRTECFKLNKSSKDWKEIVKHARKCDLEGNCNLKSYRVEEKHVVLFFNCVHDLVGAQFHDGYVTKDNFNSDQQDAVNCLKKQAYDALDDIAFDDKMKDNYPVSLSSAMNTSITDGDASIPLTDRAGTNYPDLHVTSQAVGNSHHAEIYQEPELLQALLNYNSAYEGYRAGAVAQIFGGFSEVDIPIGCYTGQASEGTSSGGNALIGLMNMSQNGSDGSNIAELIDNDIDPYQYII</aaseq>

Gene Sequence

<dnaseqindica>1..6#178..263#356..404#590..639#1314..1807#2001..2161#2424..2633#2716..2908#2983..3060#3172..3266#3771..3893#ATGGATGTTTGCTCAGATTAATTTATTAATAGAGGGAGGATAGCAAACAGGTTAATTGTAAAGCTACTATATGTTTTCTTTTTTACTAAACACTGTAAAACTAGTATAGCTGGAGGATTTGTTTATTTTTCTCTATTTTCTTCCTTTAGGTAATTTGTCTGTTCTGTGCTTGTTAAGGTACGCAAAGAGAATATTATTTCCCAGGAAAAGGTGCTCCAAGCATTTGATAATGCCCTTCAGAAGCATCTTAATCCAATTCATCGGTAAGATATGTCAATCAAAGCTAGGGTGATTTTTAGAACAATTATGATTCAAATATACTAACCCTTTTTCACCTTCACTTCTTTGGTTGCAGATCCCTTGAATCCCTTACCGGACGAATTGATACTCTGACTCATGAAGTGGTATTGGATCTAACACATTTCACTCTATTAAAAATAACTACTCCGCACCTCATTAAAAATAACACATTTCACCTCATTATTGATTTTTATCAACAAACAAGTTTGTACATAAACTGCAATTTCTCAGGGTTTGCTCGAGACAGACAAATGTCCTAGCTTATAATAATTTTCCTTTTAATTTGTAGGGACAGATCAAACAATCAAACCCTAACCATCATGCGAATGAGCATTACAGGTATGTCATATTTGCAACTATGCATAAATGATTCCTATCAGTCGTGCATTATTAATTCTAAATTATAGAATTATCAAGTAAATGAACTAAAGCATTTAAAGTATCGGTAATTCTTTTTTTTTTTCAAAATTTGGAACTGTCTAATAAAATTAAATTACTTATGCCAAAATTTAATAGAAGCTTAAAGAACAATAAATGTGAATATATATGTACATTCCATAATTAAATATTATGAATTAATAATTAAAATATAAGTTTTTCATATATGAGTGCATTGAAAGAGAAAACTATTCAATAATTTTGTTAAGTAGGAATCAAATCATGGGTTAACATTTTTTTCCTTTCTTGTGAGTGACGCGGTTTAACAAATAACAATTAATCCATACTAATCACTTCAGTGATCTACTATAGTACCATATATGTTCGTTAAAAAAACATTATCCTTTGGAATATACTTAATGAAAAAATAGATTCGTTCAAAAAAAAACTCAGTACTATATATTGATGACGCTATCTATTTATGTAGTTTCTTTAAACTATTTTGCCATGTTTATTCCCTGTTCTGGTAGTATTGTAGTTGTAAACTTCAGACAATTTGAAGTAATACCATACATTTCGGATGACATTGGTGTTTCACACTAAAAAGTACTACTGCGCTTGTGTCTGTACTGTAGATCAGAAGCAAATCAAGATGCTGCTGGATTTGCTCATTATGGGGAAGCTGTTGAGTTGAGATTCCTCAATAAGTTGAAGCCTCGTCTTTATTATACACAGGAAAAAATTACAGCAGAGGATGGCACGGCTATCCAAATTGCCTTATTTAAGGATAACCAGATAGTTAAATCCGGTCCACTTTCTTCTGCAAGAATTGAATTTGTGGCTCTTGAAGGTGACTTTAATGATGTTGCCCCTGAAAATTGGACCGAGTATATGTTCAATCAGAACATAGCAAGATCCCCAAAAGGGCCTGTGTTAGGAGGAGTTTGTCAAATCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGGCATCTCTTTCGTTGTACCATCTTCAAAGAGTAGAAGCGGAATGTTCATTCTGGCAGCAAGAGTTCATAGCAGTGACAAAGCCGGGTTCCGGATTATGGAAGCCTTGATGAATCCTGTTGAGGTGCAGGTTTACCGAAACAAAGGTATATCCTTCAGAATTGCATCTTGCTGTTCTGTAGTTTGTTTTGATGCGTGTGCTATTATGCAATTCTGAACCTTTCAGTCAGTGACTGTAGAAAAACTCTTGTTTCATAGGGTTATCTTTGAAATTAAAGAGATCGCATAATCGGCATTGTATGATCTATTGACATTTTCTCTCCTGTTTCCTTTTTCCAGCAAATAAAAATAGTGACACTCCAAAATTGAAAGATGACGTATACCATTTAAAGGGAATTTCAAAAAAGGGAACTCGCTTCGATTGGCTTAAACATAATGGGATCAACACTGTGGAGGATATGTTGAAGGCTTTAAATAAGAACGAAAAGAAGATTCGCACTGTAAGGCCTCTGGGATTCCCCAATCATTCTAGTATTTCTCAAGCACACAAAAATTAGGCCCTTAGCTGCTTTGCATGTTTATGCAAATTAGAACCTTTCTTTGTATTTCAGGACAGCAAGCAATTTACCTTTCAATGTCATGAAATAGTAGAAACATAAGTAAATTAATGTCTCAACTCCAATTCTAAAATGATATGTTTATCATGCAGTAAATATTCGTTTTGACAAAATGAAATTATCTTATGCATTTCTCGGCATTCAGGAGTGCTTCAAGCTAAACAAGAGCAGCAAGGATTGGAAAGAAATAGTTAAACATGCTAGAAAGTGTGATCTCGAAGGCAATTGCAACCTGAAATCATATAGAGTTGAAGAGAAACATGTTGTACTATTCTTTAACTGCGTACATGATCTCGTTGGAGCACAATTTCATGATGGCTATGTTACAAAGGACAATTTCAATTCAGATCAGCAGGTATAAGTTGATATCAGCATTCTTCTACCGATCCAAACCTCGATGTGTGAACTCAGAACAGTACGTGCAATTTCTATTTCAGGATGCCGTGAATTGTTTGAAAAAACAAGCGTATGATGCTCTGGATGACATTGCCTTCGATGACAAAATGAAAGACAACTATCCAGTATCTTTGTCTTCAGCTATGAACACAAGCATTACTGATGGTGATGCTTCCATTCCCTTAACAGACAGAGCAGGAACAAATTATCCAGACCTCCATGTTACATCTCAAGGTAGGTCAATGGTCTTCTTCTCTCGTCTTTGATCTCAGACATAACGCGTGATGATTTACTGTTTGGTGCTGCAGCAGTTGGGAATTCTCATCATGCTGAGATTTATCAAGAACCTGAACTGCTTCAAGCATTGCTGAACTATAATAGTGCCTGTGAGATTGAACCAAGTATGGTAGAATTAATTCCAACAGAAGAATACTGCAGGATTTATTTGAAGAATATTTTTGTTTTGATGATGATGAGATCTGTAAAAAAAATTTCAGATGAAGGTTATCGAGCAGGTGCTGTGGCTCAGATCTTCGGTGGATTTTCTGAAGTTGACATCCCTATTGGGTGCTATACTGGTCAGGCATCTGAAGTAAGTATTGTTTCTGTTCAATCGACTCAGTATGTAACATTCTCACTTTCTAGAAAATGGATTAAAAGCCAGCCTCTACATCGAAACTAGACATACACAGCCAACTGTAACATTCTTACTGGAACAGAGATGAAATTATTGTCGATTTGTCATGCTACTAGCTGAACATAACTGAAATCATCCAATTGCTAGCTTTTTCATCCCAATATAAGTTATAAGTTATTTTTCCTGATGCCAATAAGGTCTACAGCTTGAACGTATGTAATGCATGCCCATGAATATGAGTCTGTCTCTAAGTATTATTATTTTTTTAACGAACCGGTGCGAGATCGTGCCATTTTCATTGAATAGAGAAGAAAACAGTTGCACCCCCAAGGGTCCATGAGTATCAATCTATTCGTGATAGACTGTGTCTGTCTCTTATTATTGAGATCACTGCATTTCTGCATCTTTCTCCTATCACGCCCACACTCATTGCATGCTAACGAGTCTTCTTTTTTTTAGGGTACTTCTTCTGGAGGCAATGCCTTGATCGGACTGATGAATATGTCACAGAATGGCAGCGATGGCAGCAATATTGCAGAACTGATTGACAACGACATTGATCCTTATCAGTACATCATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033582

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033582&oldid=35558"