BGIOSGA033601

From RiceWiki
Revision as of 08:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033601| Description = BGIOSGA033601| Definition = Oryza sativa Indica Group BGIOSGA033601, complete gene.| tag = | tid = BGIOSGA033601-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033601

Description

BGIOSGA033601

Definition

Oryza sativa Indica Group BGIOSGA033601, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033601-TA

Ensembl Protein ID

BGIOSGA033601-PA

Length

3243

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21213986..21217228

Sequence Coding Region

21217082..21217228,21216567..21216694,21216367..21216485,21216215..21216296,21215991..21216129
,21215654..21215808,21215283..21215580,21214979..21215107,21214721..21214903
,21214533..21214592,21214364..21214439,21213986..21214017

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21213986..21217228 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21213986..21217228 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCTAGCAATTTGATTACTGCATTAACACCAAAGAACGATAGGTGGAGAATCAAAGTAAAAGTTATTAGGCTATGGGATGCGGTTAATCCTACAATGGTTGATGAGTTCTATGGTATACAGATGATTGTACTAGATGCAGAGACCTGTTTGTATTTAGATGTGATTGGCTTACTTAGCGGGATGAAGCCGATCGAGCAAAGAATGCTAGGAAAAAACACAAGCAGGGAGAGGGTTTGCAACATGCGTGAAATTGAACTCCTTTTATTAGAGGGAGAAAAAGTTAAAATTACTCTATGGGGAGATATTTTAGCAAATATGGTTGACGACGATTTGCTTGGGAAGCAAACTGTGTTCATCGCCACTGGACTTCTGGTTAAAGAATATGAAAAATTATTATCATTTGGAGTAACAAGTTCAACAGAAGTTTTTTTGGATATGGAAATTCCTGCAAGCATGGAAATATTGAGCAGGCATAATGCTGAAAAGGTTTTGCCCACAATGATTGAAGTGGACGCAAGCACTCAAGGAACCATTGAAGAGCAAATGTTCTACAATAGAAAGACATTGAAAGAAATAACAGAATTGCGATATAGTAATATACAACAGAAGGAATTTATATGCACAGTCAAAGCTAAAATTGAGGAGATTAAATCAAGAAATTGGTGGTATATGTCTTGCGATAAGTGCTTTTGTGGAACAAGAAAGGAATCAAATGTATACATTTGCAATTCATGCGGAAAGGAAGCAGTGAACCCAAAACCACGGTATGTAATAAACCTTGAGATAAGTGACCACACTACTAGGACGACATGTACAATATTTAATGAGGAAGCAGAAAGAATATTTGGTCATAAGTCTGTGTCCACCATGCTGGAGGAACAGAATGGACAAATTGATATGATTCCTGATACAATACGTCAGATATGTGGAAGAATATTGATATTCAGATTGAAGTTGACTAAAAGGAATTTAGAAGAGTGTAAGGAAGACTACAAAGTGAACTACACTTTTACACCTAATGAAAAGCTTGAGATGAATTATGTAAATGACAAGGCAGAAGAGTTTGGGCAGCACAATTTTCAGGTAAAAGAAGAGCCAAAAAATGAAAGTAGTGATGATTATGAAATGAACAATCATCGCAAAACAAAGAAAGAGAGATCAAACATGAGATCTACAAAAAGATCAAACAAGGAACCATACATTACCGATTCTGATGGGAAAACAAATGAAAAGGCAATCACAATCGATGATGATTCCGAAGAATCACTTGATGATTATTTTGATGAAGAATACAATAAAAAGGTTACCCAGGAGAGTACAAAGACAAATCCTTCTAAAAGAAGAGTTACAAGACGCTTTAAAATAGCTAACAAGTCAATGTTGAAGTGCAATGATGATTATGGCTTCACTGATTTGCAAAAATCAGAAGATGAGGTAAAGAAGAGCTATGACATCATCGCAAACNAAGAAAGAGAGATCAAACATGAGATATACAAAAAGATCAAACAAGATGTGGAGCTAGGCTACCGGAGGGCTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPSNLITALTPKNDRWRIKVKVIRLWDAVNPTMVDEFYGIQMIVLDAETCLYLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIKSRNWWYMSCDKCFCGTRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDMIPDTIRQICGRILIFRLKLTKRNLEECKEDYKVNYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGKTNEKAITIDDDSEESLDDYFDEEYNKKVTQESTKTNPSKRRVTRRFKIANKSMLKCNDDYGFTDLQKSEDEVKKSYDIIANXEREIKHEIYKKIKQDVELGYRRAC</aaseq>

Gene Sequence

<dnaseqindica>1..147#535..662#744..862#933..1014#1100..1238#1421..1575#1649..1946#2122..2250#2326..2508#2637..2696#2790..2865#3212..3243#ATGGCACCTAGCAATTTGATTACTGCATTAACACCAAAGAACGATAGGTGGAGAATCAAAGTAAAAGTTATTAGGCTATGGGATGCGGTTAATCCTACAATGGTTGATGAGTTCTATGGTATACAGATGATTGTACTAGATGCAGAGGTATGATTGTTGTAAACATGTGATTTAATATATTGTTCTATTATGTAAATACTATTTTTTTGGTGCAGGGCAACTCAATACATGTCTCTATCTCAAAGCAATTGGCGAACCACTTCAGGCCAAAAATTAAGATTAACTCAATATATACTTTTAAAAATTTCAAAGTTATGGAACATGATAAATACCGTGTCCTAAAAAACAATCTGAAAATCCTTTTTTATCATGATACCATAGTAAAAGAGGTAAAATCAAAAAGACAATGTTTCTTGGACTATTACTTCGAGTTTACAGACAGGAAAACATTAAGGAGTAGGTTGAATAAAGATCAACAGTTATCAGGTATGTGCATAATCTTACTTCTTTTAAACATTGTTATTTGTACTAAAGACCTGTTTGTATTTAGATGTGATTGGCTTACTTAGCGGGATGAAGCCGATCGAGCAAAGAATGCTAGGAAAAAACACAAGCAGGGAGAGGGTTTGCAACATGCGTGAAATTGAACTCCTTTTATTAGAGTAAGATTGTTGTCTGCAAATTTAAACCAGCACTAATACTTTCTATGTGGTATATTTTACAAGACTTTATTGCATTTGTAGGGGAGAAAAAGTTAAAATTACTCTATGGGGAGATATTTTAGCAAATATGGTTGACGACGATTTGCTTGGGAAGCAAACTGTGTTCATCGCCACTGGACTTCTGGTTAAAGAATATGAAAGTGAGGATGTTATTTTTTTCTAATTTAACGTACTTATAGTTTTAGTAAACTAACGACATTGATCATTTAGAATTATTATCATTTGGAGTAACAAGTTCAACAGAAGTTTTTTTGGATATGGAAATTCCTGCAAGCATGGAAATATTGAGCAGGTGTGCAGTAGTAGCATTTAAATTCATATATATTTGTTGATTTGTCTAAAATTATCTGATGGATTATATTGCATTTTATTTATAGGCATAATGCTGAAAAGGTTTTGCCCACAATGATTGAAGTGGACGCAAGCACTCAAGGAACCATTGAAGAGCAAATGTTCTACAATAGAAAGACATTGAAAGAAATAACAGAATTGCGATATAGTAATATACAACAGAAGGTACATATCCATTCCTATGTTACGTTTATTTTTCATTTGTGTATTTAATGTTGGGAAAAATCTACTTGATGGCTGATGTAATGAGCATTACCTAAATTAAGTGGTACGTTTAGTCGTGAAGTCATCTTTAGTCACTCTTTCAAGCTGATTAGTTAACCAACATTAATTTGTTTTTTATTTAGGAATTTATATGCACAGTCAAAGCTAAAATTGAGGAGATTAAATCAAGAAATTGGTGGTATATGTCTTGCGATAAGTGCTTTTGTGGAACAAGAAAGGAATCAAATGTATACATTTGCAATTCATGCGGAAAGGAAGCAGTGAACCCAAAACCACGGTAAGCATGCTCTTCAAATTTTATTTGACATATTGTAGCAGGTATATTTACCATTAACGGCACATTGTACCAGGTATGTAATAAACCTTGAGATAAGTGACCACACTACTAGGACGACATGTACAATATTTAATGAGGAAGCAGAAAGAATATTTGGTCATAAGTCTGTGTCCACCATGCTGGAGGAACAGAATGGACAAATTGATATGATTCCTGATACAATACGTCAGATATGTGGAAGAATATTGATATTCAGATTGAAGTTGACTAAAAGGAATTTAGAAGAGTGTAAGGAAGACTACAAAGTGAACTACACTTTTACACCTAATGAAAAGCTTGAGATGAATTATGTAAATGACAAGGCAGAAGAGGTATGACTATTTGCATTATTCTTTTTTATACATGTTATAGATCTTATATTACAATATAAATATTAATTTGCAGTCAATGTTGAAGTACAACGATGATTATGGCTTCACTGATTTGAAAAAAATATTTTTGTAATGCATATGATATATATATAATTATTTATTGGATGTTCTGTAGTTTGGGCAGCACAATTTTCAGGTAAAAGAAGAGCCAAAAAATGAAAGTAGTGATGATTATGAAATGAACAATCATCGCAAAACAAAGAAAGAGAGATCAAACATGAGATCTACAAAAAGATCAAACAAGGTATGTATAATTGCTTTCTTACATAACAATTCGTAAAGTTGTTTATAGTAGTACACTAATAATGATGTTTTATAGGAACCATACATTACCGATTCTGATGGGAAAACAAATGAAAAGGCAATCACAATCGATGATGATTCCGAAGAATCACTTGATGATTATTTTGATGAAGAATACAATAAAAAGGTTACCCAGGAGAGTACAAAGACAAATCCTTCTAAAAGAAGAGTTACAAGACGCTTTAAAATAGCTAACAAGGTACTTCATTTATTTACTTTCCAAATTCACTCAATTTAGTTTTCACATAAATTATTTACCATTTCAATATGGCACTATGATATAGGCTAAGAAAGATCTTATATTACAATATAAATATTAATTTGCAGTCAATGTTGAAGTGCAATGATGATTATGGCTTCACTGATTTGCAAAAATCAGAAGATGAGGTAATATATAACAAATAAAAAATATTTTTACAATATATATTATATATATAATTATTTATTGGATGTTCTGTAGTTTGGACAGCACATTTTCAGGTAAAGAAGAGCTATGACATCATCGCAAACNAAGAAAGAGAGATCAAACATGAGATATACAAAAAGATCAAACAAGGTATGTATAATTGCTTTCTTATATAACAATTCGTAAAGTTATTTATAGTACTACACTAATAATGATGTTTTATAGGAACCATACATTACCGATTTTGATGGGAAAACAAATGAAAAGGCAATTACAATCGATGATGATTGTGAAGAATCACTTGATGATTATTTTGATGAAGAATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTATAATATATTAAAAGTCCCTTAAACATCTTAAAACTCTCGAGCTTGGATCACGGATAGGGCTAAATAGTCAAAAAAAAAATCATTTAAAGCTAATATTTCTCCTTTTCCTTTCAGATGTGGAGCTAGGCTACCGGAGGGCTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033601

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033601&oldid=35577"