BGIOSGA033637

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Revision as of 08:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033637| Description = BGIOSGA033637| Definition = Oryza sativa Indica Group BGIOSGA033637, complete gene.| tag = | tid = BGIOSGA033637-TA|...")
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Gene Name

BGIOSGA033637

Description

BGIOSGA033637

Definition

Oryza sativa Indica Group BGIOSGA033637, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033637-TA

Ensembl Protein ID

BGIOSGA033637-PA

Length

3830

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:20630891..20634720

Sequence Coding Region

20632633..20634720,20630891..20630998

Genome Context

<gbrowseImage1> name=IndicaChromosome11:20630891..20634720 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:20630891..20634720 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGATACAAATACTTGGTCCATGGCGAGTCCAAGCAGAAGATCAAATTGCTGAGGCCTCGATATGCTCTCTATCTCAATGTCACCGATGAAAACTTGCTGGTCACACTGGACAAGATTTGGCGATCTGACGGGCCGGTGCTACAGTCCGCCAACAGCGTTCACGGAGACGACTGCAAGGATCTGTGCCTGGCCTTTTCCATGTCGAGGTTTCTCCGGTGCAGGCTCGAAGACGTGAGGCTGGACGCAGACAGCCTCTCCATGTCGCGGAATCTGATAGTGACAAGAATATTGCATGTCGACCAGAACCCTGCGAGGGTGTTCAGGATAATGGAGCTGGAGATTTCGTTCCTCAAGGACTACTTCTACACCCTCTATCCTATCGTCTTCTGGCAAGGCCTTGCTTCTCTCTCCTTGAGCGTTCTTCAGTCTCTCGCGGCCTTGGGGCTCGCCCTCTGGCTCGCCTCGGGCGTCAATAGGGTCAAGAAAGATCTTCCGGACCCCGTCAATGTCGTGCACGGCCATAATGTGGAGGTGACAATCACATGGGTGTTCATGTCCTTCATGATGTTCAAAGAGATCTGGGAGATGATCACTTACTTGCTATCAGAATGGACAAGGCTTCTCCTTGTGTGCGAGTATACGCGGTCCAGATGCAGGTGGATAAGAAACGCCACGATGGAGAAGCTGTTAAGTTCCTTTCTAACGTTAAGTTCCTTTTTAAGTCGTAAGATCTTTTCTGACCCTTGGCATGGATACATCGACCAGTACGACTTCTTGCAGTCATTTGACTACAGCCCGTCGCTCTGGAACCTGATGTACCGTGCTACTCTAGGCGTCATCAAAGAGAGGGTAAAAGGGCAAAAGCCTGGCACCGCCATCAAGATCCCAGAATGTGTAAAACCTGCAATTCTTCAGGCATTGCGCTCAATGGATCTCGCTGGCTTGGGCGGCCGCGAGCTTCCCCGAGACGTCCCATCGTTGAGCGCCGCGAGATTGCTTGAGGATTTCCGATGGGCGTTGCTTGACCTGTACACGTGCTCCCAGGTCATTCTGGTTTGGCACATCGCGACCTCCATGTGCGAGATCAAGCTCGCCCGAGACAGGGGCATTGACCTGAGCAAACCAGGGCTCCTGCGCTCCGCCTTCACGTACCTGAAAATTTTTCTCTGCGGCTGCTGCTGCACTCCTCAGCCGTACCTCGTTGCTGAAAATATTCTCGGTGATGATCAACTCCGGACTAGCTACATTGTTGCAAACAGCTTGTCACGATACTGCGCGCACTTGGTGGTTTTTCAGCCTGACCTGTTGCCTGACAGCTTGGCAGTTCCCGCGGTGATCTTTAACAACACCGTTCCAAATGCTTCTGATATTATGAATGACCGCGACTCCTTGCTGACAAAGTATGACAAGCTCAATGGGTTGTTCTCACCCGAAGCTGCTGAACTGAAAAAACTGAACGGGACCATCGTAGAGAAAGGCGCGGTACTGGGAAGGCAATTGCTTGAAACAATTCCAGACGATCAGCAGCGGTGGCAAATCCTGGCGGGTGTATGGNCTGATTTGCTCGTGCACATTGCGCCCAGCTGGAACGCTGAGGCACACAAGATTTGCCTCGAGTACGGAGGGGAGCTCATCACCTTCATCTGGGGATTGCTCTGGCACTGCGGCATCGAGAAGAGCAGCCTGTGGCGAGATCAGGACGATGCGCCTGGAGATGCCAACGTCCAGCCTCAGCCTCAGCCTGCAGCAGAAGAACCTCAGGGTGGCCACAATGTCGAAGATGATGCGATGGTGGAAGATGCCCAAAACGGAATTGAAGCTCGTGAAGCAGGCGTGCAGAATCAACCAGCGGAGCAGGTGCTGCAGCAAGCTGCTGAAGCAGATGTGGAGATTGCAGATGAAGCACGAGAAGACGAGCCTGAGCCTGGCAACGACATCCACGCTCAGTCTGCTGCTGACATGGAGATTACAGATGAAGCTCAAGAAGGGGAGTCTGAGCCTGGCAGCAATGTCCAAACTTCTGCTGCTGGTGTGGAGATTATAGATGAAGCTCAAGAAGAGGAGTCTGAGCCTGGCAACAACAACAATTCAGTTGAAACTGTATTTTATAATGTTGGGTACATGGTTTTCAGATTTGTGCTGCCTTATTGGGATCCTGAACTAGCCGCAGCTTGTGCAGCATGGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MDGYKYLVHGESKQKIKLLRPRYALYLNVTDENLLVTLDKIWRSDGPVLQSANSVHGDDCKDLCLAFSMSRFLRCRLEDVRLDADSLSMSRNLIVTRILHVDQNPARVFRIMELEISFLKDYFYTLYPIVFWQGLASLSLSVLQSLAALGLALWLASGVNRVKKDLPDPVNVVHGHNVEVTITWVFMSFMMFKEIWEMITYLLSEWTRLLLVCEYTRSRCRWIRNATMEKLLSSFLTLSSFLSRKIFSDPWHGYIDQYDFLQSFDYSPSLWNLMYRATLGVIKERVKGQKPGTAIKIPECVKPAILQALRSMDLAGLGGRELPRDVPSLSAARLLEDFRWALLDLYTCSQVILVWHIATSMCEIKLARDRGIDLSKPGLLRSAFTYLKIFLCGCCCTPQPYLVAENILGDDQLRTSYIVANSLSRYCAHLVVFQPDLLPDSLAVPAVIFNNTVPNASDIMNDRDSLLTKYDKLNGLFSPEAAELKKLNGTIVEKGAVLGRQLLETIPDDQQRWQILAGVWXDLLVHIAPSWNAEAHKICLEYGGELITFIWGLLWHCGIEKSSLWRDQDDAPGDANVQPQPQPAAEEPQGGHNVEDDAMVEDAQNGIEAREAGVQNQPAEQVLQQAAEADVEIADEAREDEPEPGNDIHAQSAADMEITDEAQEGESEPGSNVQTSAAGVEIIDEAQEEESEPGNNNNSVETVFYNVGYMVFRFVLPYWDPELAAACAAWD</aaseq>

Gene Sequence

<dnaseqindica>1..2088#3723..3830#ATGGACGGATACAAATACTTGGTCCATGGCGAGTCCAAGCAGAAGATCAAATTGCTGAGGCCTCGATATGCTCTCTATCTCAATGTCACCGATGAAAACTTGCTGGTCACACTGGACAAGATTTGGCGATCTGACGGGCCGGTGCTACAGTCCGCCAACAGCGTTCACGGAGACGACTGCAAGGATCTGTGCCTGGCCTTTTCCATGTCGAGGTTTCTCCGGTGCAGGCTCGAAGACGTGAGGCTGGACGCAGACAGCCTCTCCATGTCGCGGAATCTGATAGTGACAAGAATATTGCATGTCGACCAGAACCCTGCGAGGGTGTTCAGGATAATGGAGCTGGAGATTTCGTTCCTCAAGGACTACTTCTACACCCTCTATCCTATCGTCTTCTGGCAAGGCCTTGCTTCTCTCTCCTTGAGCGTTCTTCAGTCTCTCGCGGCCTTGGGGCTCGCCCTCTGGCTCGCCTCGGGCGTCAATAGGGTCAAGAAAGATCTTCCGGACCCCGTCAATGTCGTGCACGGCCATAATGTGGAGGTGACAATCACATGGGTGTTCATGTCCTTCATGATGTTCAAAGAGATCTGGGAGATGATCACTTACTTGCTATCAGAATGGACAAGGCTTCTCCTTGTGTGCGAGTATACGCGGTCCAGATGCAGGTGGATAAGAAACGCCACGATGGAGAAGCTGTTAAGTTCCTTTCTAACGTTAAGTTCCTTTTTAAGTCGTAAGATCTTTTCTGACCCTTGGCATGGATACATCGACCAGTACGACTTCTTGCAGTCATTTGACTACAGCCCGTCGCTCTGGAACCTGATGTACCGTGCTACTCTAGGCGTCATCAAAGAGAGGGTAAAAGGGCAAAAGCCTGGCACCGCCATCAAGATCCCAGAATGTGTAAAACCTGCAATTCTTCAGGCATTGCGCTCAATGGATCTCGCTGGCTTGGGCGGCCGCGAGCTTCCCCGAGACGTCCCATCGTTGAGCGCCGCGAGATTGCTTGAGGATTTCCGATGGGCGTTGCTTGACCTGTACACGTGCTCCCAGGTCATTCTGGTTTGGCACATCGCGACCTCCATGTGCGAGATCAAGCTCGCCCGAGACAGGGGCATTGACCTGAGCAAACCAGGGCTCCTGCGCTCCGCCTTCACGTACCTGAAAATTTTTCTCTGCGGCTGCTGCTGCACTCCTCAGCCGTACCTCGTTGCTGAAAATATTCTCGGTGATGATCAACTCCGGACTAGCTACATTGTTGCAAACAGCTTGTCACGATACTGCGCGCACTTGGTGGTTTTTCAGCCTGACCTGTTGCCTGACAGCTTGGCAGTTCCCGCGGTGATCTTTAACAACACCGTTCCAAATGCTTCTGATATTATGAATGACCGCGACTCCTTGCTGACAAAGTATGACAAGCTCAATGGGTTGTTCTCACCCGAAGCTGCTGAACTGAAAAAACTGAACGGGACCATCGTAGAGAAAGGCGCGGTACTGGGAAGGCAATTGCTTGAAACAATTCCAGACGATCAGCAGCGGTGGCAAATCCTGGCGGGTGTATGGNCTGATTTGCTCGTGCACATTGCGCCCAGCTGGAACGCTGAGGCACACAAGATTTGCCTCGAGTACGGAGGGGAGCTCATCACCTTCATCTGGGGATTGCTCTGGCACTGCGGCATCGAGAAGAGCAGCCTGTGGCGAGATCAGGACGATGCGCCTGGAGATGCCAACGTCCAGCCTCAGCCTCAGCCTGCAGCAGAAGAACCTCAGGGTGGCCACAATGTCGAAGATGATGCGATGGTGGAAGATGCCCAAAACGGAATTGAAGCTCGTGAAGCAGGCGTGCAGAATCAACCAGCGGAGCAGGTGCTGCAGCAAGCTGCTGAAGCAGATGTGGAGATTGCAGATGAAGCACGAGAAGACGAGCCTGAGCCTGGCAACGACATCCACGCTCAGTCTGCTGCTGACATGGAGATTACAGATGAAGCTCAAGAAGGGGAGTCTGAGCCTGGCAGCAATGTCCAAACTTCTGCTGCTGGTGTGGAGATTATAGATGAAGCTCAAGAAGAGGAGTCTGAGCCTGGCAACAACGTCCACACTCCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTAACAAGGCCCAGTCCGCTGCTGGCGTGCAGATTGCAGATGAAGCTCACCAATAGGAGCCTGAGTCTGGTAACACAACAGGATCAGGTAGAACATCAGAAATACCTGTTAAAAGACGCTGGAGATATGTCCTGGGATTGAGATGCAGTGATCCGGAAGGGAAACAGTGTCCGGACCTCGCAGCTGATGAGCTGATGTGTGAACACACATCAAGCCGATGAAGAGCAGTGCCTCTCATAGTCAAGGTTGAGTACTTGAGTGAAACTGTGAAAGCCTTGTCTGCAAAAGCAAGAAAAAACTAGAAGATTATTCAACTCATGCAGTGTGATATCTTCCGTCTCCCGAATGCGTGCAGCAACGTACTTTACAAATATATAACTTTCTTTGTACATTGTGCTTATGTTCAATTTTGTTTGCAGAGTATTTATGTTCAAGGAAAAAAAAAGAGAGTTTTTGTGTTCAGTTTATCTTTCGACAGCGTTTATGTTCTGTCGACAGTAATACTGCAGCCATGAATGTTTCACAATTCTCCTCAGGTTTTCGTTCAAGAATTTTGTTTGGATGTCTATGGTTGCCACATTCTTGGTTGCACAAATCATTTGGGTGTCAAATGCCTTATTGCCACATGCTTGTGGTTCCCAAACTGTGTATGGATTTTTGCAAGCATTTCTGGAAAGAGAGACAAACTACAAACCCAACTATCCTACAGGCTGCACTAAATTGCAGATAAGCGCAGATAAAAATCAAACTATGAATCATAATACTAGCCAGCATCATTTTGAGATCACATCCAAAACTTTTCTCTCCAATATGCGGAGATACCATGGCAGTACAGTAATCAGTACTCAGTAGGTACATTGTTTCAGTAGATCAGGAGCCGCACCTGGATGGCTCGCCGGCCCAGAAGGAATCTGCGCCGGCCACTCGTGACACGGCGGAATGCACACTGCGCCTCTGCTCCATCCGCCAAACCAGAGCGAGCCAGGCTGCCCGACGGAAGGTGGCCGGAGAAGCCGCTTCTGGGAGGAAACCCTCCAGGGCAGACCAGAGCAACGGCATCTCCAGCGAGAATGACCCCCGGAACTGGATCGGAATCCCTTCTCCATTCTCCCTCCGCCACCACCACGGCGACGCCTCCTCCTGTAATCAGCATGATAGATGCATTTTTTGGTCCATTAGAATGTTCTTTACAGGATTGGCTACTTGGCATATACTTGCAGAACAGACTTTACAAGCATTTAAAAGTGAATATTGGTATAATATTCTCCTAAATCAAACACATCAATTCTTTTCATCTCCCATAGCAACGTGCAGGGTATTACCAGTCTAACCACATGATTAGTGGCTCTGATCAGTATAACTAGTAGTAACAAAAAAGTAGGTCATGATCTATATACAATTGCACCCATGCATGATACTCCACTTACCCTCTCCTTGGCAAAAGTAACTTTAATAATTTGACCACTAATGTACCCTACACAGTGGAATTGATTTTTGTTTCTCCCTTTCTCTGTCAGAACAATTCAGTTGAAACTGTATTTTATAATGTTGGGTACATGGTTTTCAGATTTGTGCTGCCTTATTGGGATCCTGAACTAGCCGCAGCTTGTGCAGCATGGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033637