Os09g0321900

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0321900| Description = Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19) (Ubiquitin-protein ligase M) (Ubiquitin carrier protein M) ...")
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Gene Name

Os09g0321900

Description

Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19) (Ubiquitin-protein ligase M) (Ubiquitin carrier protein M) (Nedd8-conjugating enzyme Ubc12)

Version

NM_001069394.1 GI:115478527 GeneID:4346713

Length

4395 bp

Definition

Oryza sativa Japonica Group Os09g0321900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9923696..9928090

Sequence Coding Region

9925424..9925532,9926396..9926504,9927100..9927178,9927368..9927484,9927747..9927884

Expression

GEO Profiles:Os09g0321900

Genome Context

<gbrowseImage1> name=NC_008402:9923696..9928090 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9923696..9928090 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgaacctctttaagataaagggacagaagaaggaagaggcggcaaatacaaatgggagacctcctgctaagaagcaaagtccaggagaattacgtctccataaagacattgctgagcttaatcttccaaagaaaaccaacattacttttcctaatggaaaggatgatctgatgaacattgagattactcttcggcctgacgaaggatactatgtgggtggagcttttgttttcactttacaagttcctcctacttaccctcacgagccgcccaaggtcaagtgcacgactaaggtttatcaccctaatattgacttggacggaaatgtctgcctgaatatcctgcgtgaagactggaagcctgtcttgaatatcaataccattgtatatggtttgaaccttcttttcattcaacccaatgacgaggatcccttgaaccatgatgctgcggctgtcctccgagatgacccacaaaagttccggaggaatgttcagacggcgatgtcgggaggctatgtcgacagggtgcattttccaaggtgtaagtaa</cdnaseq>

Protein Sequence

<aaseq>MLNLFKIKGQKKEEAANTNGRPPAKKQSPGELRLHKDIAELNLP KKTNITFPNGKDDLMNIEITLRPDEGYYVGGAFVFTLQVPPTYPHEPPKVKCTTKVYH PNIDLDGNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQK FRRNVQTAMSGGYVDRVHFPRCK</aaseq>

Gene Sequence

<dnaseqindica>1729..1837#2701..2809#3405..3483#3673..3789#4052..4189#ctctcccgcaaacagcacaaaaaggcagcagctttgctctgctcgggtgttccgccgccaccgccgccgccgacgaatcactccggcgggctcttccctcctcctcgtcgtcgtccaccggcgaccggcgcttcgtacggtgcgtctcctttcttgcggaaagattcttcccttatatttttattttgccggttgatcatgggtaaagaaaccatgaggggaggagggttaattttaatctgctattgttcttgttctagttgttttttttttgggttcaatttcgatgaagctttcgttttccgttgtggtcgctggattcatctgctgggtgtttccgtggaaatctaggttttcaggtttggggggcgcactgggaattgggcatatgaatagttggggatgtaggagaattgtagtaatgctgatcgtttggtggaattttagccgattatccaaagttaaattcctttgctgatgataggctgattcttgattttgaaaaaccttttttttatgccgcagcttttttggctggagtcgggagtttaactagtatcttgttagggttagtccttgctgttacttttgttgtgtttttgtcaccttgttggtaaaaacgagcatcctcttggaaacgatggaggcttaaggaaaaccttttttagtgcatagattttataattcactctgtaactacccacatagtcgcgctttgcatgacttttgattgtttaataaattttgtgtatgatctattagtttaggtaagcttttaagaaggttttgacataataagttaatttgtttacaaagtattgatttccctagccaactatagatttagctaagttgtactatatgtttataagagaagtcactataagcctcatgtttcttctcttatcccctctcttttttatcatgtgtctaggaggtggtaccaaaacctccggaaattttcatatgtttagcctatttgtggttttttttaatacatgtacccttttgaaccaatggccattgtttatccaaacccttcatctcattgtgtaatgtatcgacacctctatggattagtatatttgttgaaatttgtatactgcgaattcagtgtattaactcatgattttaggggtagtacttagtacttgctatcgattattcaacagaatgaagctgtgcattgcctttttttttaaaaaaaaagaaagaaattcaggttgtcaatgtatagtatatgttatgtcctgtggtggtaggtgtttctctttttttttctatcatggagtttatcatggtgctttttactgttcaacggtacgatgatatgattgtgtctcacataatttacaaaaattttgactgtctttaagagattctgcctattaatagggtcaaggaatgaattatggcccacttactgatttaatatattgggtaagagaaattgatgtgggatgcctgatggctgctaaaggcattcaggcctgaagaggttggcaggtttccctattacaatgattaaagaaactgagataactgactgaacagttgctctctggttcatcattaatttgtacttatttgcatgtaaaatgatcctttatttcaagtggatgcttttcttctgttaatatatatatgttagtgttgtttatattgtcaaaaagacacattctttttaatacttcattctataagcttttctctcttgtttcacagaagatgttgaacctctttaagataaagggacagaagaaggaagaggcggcaaatacaaatgggagacctcctgctaagaagcaaagtccaggagaattacgtctccataaaggtttgtttttgcagaagtttttttttattgtattacttgtgttatttggtttctagctttctgatattatactattcaatgtgtgctgattagtgctagattgaacttctctttcttgctaatttatgtatttacatctctagaactgtgtcatacaaatgaacatgcattaaacaaggatctaaatgctaactattatctatatatgaaatgtccgtgaatgtacaaactatgttgtacttttgtcaccatattggttgagcgtgtacttagctttattggccgctcttctatagaaatatggaccttgtggggagttggagggggcgaatgaggcggttagggataggacatgcagcgtggtgtgacttgggagtagtgggcactagccagtactaaacaggatgttggtgggcttgagacaaagggtgggctgtgggtgagtgggctgatagtatcttgctggcccacacaagaacatgctgctacatgtgacaaccatgacaacatcatgacttctacttagtatgtgttaataaagagaaagatccaaatgtccaattttaatttttactaaatctgcattttcaactaaaatctaattaacgttatttcaactcaaattgaacatgtggcacacatataattcgcttctgaaataattccataatgatgtttagatatgttgattacactattgctagaaacctatctttttgtccaggctcctatttaaatattaacataataggcatgactctcactgtctttggatctttttatgtgatggaaatagttcctttttcgttagtatagtttttccaaatatggatctcgctgactattgatattgtatcttacagacattgctgagcttaatcttccaaagaaaaccaacattacttttcctaatggaaaggatgatctgatgaacattgagattactcttcggcctgacgaaggatactatgtgtaagtatattctagatgtttcttttaagcccattaaatctcttagctgttctattacacatgctcttatatcaatttagtttttctgtacttcaattttgactgaacatttaaactactataaaactttttactgttgaaagttgccacatgtagagtgttacgaggcattggatgcttcttgacatctttaaatcgcacgcatttaacttttgatgtacttggagacatgtttgttgataaatatggtttaggaggattagctcatattttacatcacacctgacgatttctcttgatgtagaagggacaaagggttgttccattcttttaaaattttcaaatacaaataaaagtagctaataataatctgttgtagattgctttcattttttcattagatgtttctttttgttccctctcctttgctgtaaaaacattatgaacaatatggatgacatatttgccctaaaaaacagaagtgatggtaattggaaataaatcatttgtgtgttttcaatatacacaaggtgttacttttttcagattatttcaaattgaagtattctaacatccaatgtcttttcgttcataggggtggagcttttgttttcactttacaagttcctcctacttaccctcacgagccgcccaaggtcaagtgcacgactaaggtaacatagattctattaactgtagcctactcctttctttatcggttttttttttcgcgaacgcgcaaaagaattgcacatcaatatattagaagaaaatgaatttttgttacacaacgcaatcagccagaccggcttatgccaagggaagggctttatcggtaatatattgatcatttgaccttgtaggtttatcaccctaatattgacttggacggaaatgtctgcctgaatatcctgcgtgaagactggaagcctgtcttgaatatcaataccattgtatatggtttgaaccttcttttcattgtaagtatttgttttaggaactgatcaatcttttattttctatcagcaataatggcttagtagtttatttcctattgtaaatatgaagtggcacatgattaaaccagattgaacctttacatgcagatatgtctaaactagtctgctacttgccatattactattttaaatctcacgtgaaattgttgtctttgtgggatagaactcaccatttgcactgtgttttctcatgtaacaattatctttgctacattacctgcagcaacccaatgacgaggatcccttgaaccatgatgctgcggctgtcctccgagatgacccacaaaagttccggaggaatgttcagacggcgatgtcgggaggctatgtcgacagggtgcattttccaaggtgtaagtaaaggtgtgtgtttgctggtgctctgtggctggcttctgcccaccttactcctgaataccgttctgcaatctgaacaatgtgacttgcccaagaaatgacatatttgtgttacatttgagtatgaatgatgcttggttgaaatgtactggaatcatgtaagcgcaacgatgtttaaactgaaatgtcaaatgatgtttggaacttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0321900, RefSeq:Os09g0321900