BGIOSGA033772

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Revision as of 08:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033772| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033772, complete gene.| tag = RHF| t...")
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Gene Name

BGIOSGA033772

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033772, complete gene.

LocusTag

RHF

Ensembl Transcript ID

BGIOSGA033772-TA

Ensembl Protein ID

BGIOSGA033772-PA

Length

5364

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18224162..18229525

Sequence Coding Region

18229461..18229525,18227343..18227508,18227211..18227257,18225958..18226020,18225750..18225858
,18225261..18225646,18225064..18225174,18224707..18224978,18224592..18224635
,18224162..18224233

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18224162..18229525 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18224162..18229525 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCGACGAGGTTGGGCTGCGCATTGAGCAGCCCATGGGCCCCGCTTTGCTTCGCTTATCATATCAGGGTTGTGATTCCTTTGCAATGGCATCTGGAACTGATGAGAAAGCCAAGATGGAGGGTTTGACATCAGCTGCAGCCTTTGTTGAGGGTGGGATTCAGGATGCATGTGATGATGCGTGTAGTATCTGCCTTGAGGCGTTCTGTGAGAGTGACCCTTCCACATTGACTGGTTGCAAACACGAGTTCCACCTCCAATGCATTCTTGAATGGTGTCAGAGAAGTTCTCAGTGTCCTATGTGTTGGCAGCCTATCAGTTTGAAGGACCCTACCAGTCAAGAGCTGCTCGAGGCAGTGGAGCGTGAAAGGAATGTAAGGACCAATCAAACTCGAAATACAACTATATTTCATCATCCTGCTCTTGGAGATTTTGAGGTTCAGCATTTACCCGTTGTTGGTAATGATGCTGAACTTGAAGAGCGTATATTACAGCACCTAGCAGCTGCCGCTGCAATGGGAAGGTCACACCACCTTGGTAGAAGAGAAGGACACAGGGGTCGTTCTGGCTCTCATGGTCGCCCACAGTTCTTAGTTTTTTCTTCGCATCCAAACATGCCTTCTGCTGGTTCAGTTTCTTCATCGTCCGTTCAAGGGGAAGTTGATAATGAATCAAGTCCTGTCCACACAGCTGGTGAATTATCACTGCATGCTAGCACCCATGAAGAAGCAGGCAATCAAAGTCCTGGGATGCTTACATACGATGCTGATCAAGATGCTGTTGTTTCATCTGGAAATAGTACCCCTGTATCCAGCCCTAGGTTTTTCAACAGGAGGCATTCCACTGGGCAATCAACTCCAGTAAACAACGACAGAGCTGGGCCATCGGATCTTCAGTCTTTCTCAGACTCTCTGAAGTCTCGCTTAAATGCTGTCTCTATGAAGTACAAGGAATCTATTACAAAAAGTACTCGAGGATGGAAGGAGAGACTTTTTTCGCGTAATTCATCTGTGGCAGATCTTGGTTCTGAAGTAAGAAGAGAAGTTAATGCTGGAATTGCGTCCGTATCAAGGATGATGGAGCGTCTGGAAACTAGAGGTAGTAATAATGGTAGAACAAGTGATGGCCCGGCAACATCCACTTCTGAAGTTATTCCCAGTACAGAATCAAGCAATGAGAGAGTTACAGAAAACAATCCAACTACTGCAGCGACAAGTTCTGAAAGAAGGCCTGCACATTCCCATTCTTCTCCATCAAAGGATTGCCATTGCCAGGCATGGGCAGGTGACCAAAAGCAACGTCATGATGTTGTCATCCTCAGCATTGCATAA</cdnaseq>

Protein Sequence

<aaseq>MGGDEVGLRIEQPMGPALLRLSYQGCDSFAMASGTDEKAKMEGLTSAAAFVEGGIQDACDDACSICLEAFCESDPSTLTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTIFHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQFLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTAGELSLHASTHEEAGNQSPGMLTYDADQDAVVSSGNSTPVSSPRFFNRRHSTGQSTPVNNDRAGPSDLQSFSDSLKSRLNAVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGSNNGRTSDGPATSTSEVIPSTESSNERVTENNPTTAATSSERRPAHSHSSPSKDCHCQAWAGDQKQRHDVVILSIA</aaseq>

Gene Sequence

<dnaseqindica>1..65#2018..2183#2269..2315#3506..3568#3668..3776#3880..4265#4352..4462#4548..4819#4891..4934#5293..5364#ATGGGCGGCGACGAGGTTGGGCTGCGCATTGAGCAGCCCATGGGCCCCGCTTTGCTTCGCTTATCGTAATTGCCCACGTGGCACACAGTAATAGCGGGGTTAGTCGGGCTGGGGCCCATGTGTCGGCTACACGTTCCCGCGCCCAATTTTCTTTACATTATCCTCGGAGACGGTGGCCGACGTGCCGTTATTACCTCTCTCGAAAGCCGCGCCCCTCGCACGCGCTCACCGCCACCGCGTTCACTGACGTCGTGGCCCCACCGCCCCTACCCCCCACAAAAGGCAATCTCCACCGTCACCTACACCTACCCCACCGTAAAAGGTCACTGACAGGTGGTCCCCGGAGAGCGGGTCGGGGCAGACGAAGCGGTCAAAACGTACTTAAAAGGCGACCCGCTTGTCTCACTCTCTCTCTGCTACAGCTAGCCTACGCGGTTGACATGTGGGACCAGCTTTGATGGTGGCCCCACGTGTCGGTGTGTGGGTAGGTGGGGGCGGCGTCGGGGTGACGACTGGTGTCTCGGTTGGGGTGAGGGTGGGCCCCACTGGGGGGTGGGGTGGTGGTGGCCGAGTGGAGAGGAGGCACGCGCTTGCTCGCCTCGTCGTCTCGATACCTTTCTTCTCCTTTCCCCATCGCCTCCTCACCCAGAGAGAAGAGGAGGTTGGAGGAGGAGGCGAAGAGGCTAGCTAGCTTAGCTAGGGTTTCGTGCTCCCCATCGCCTCGCGCGCGCAGCCGGATCCGATCGGGCGTCCTCGTCGGCGTCGGCGGCGGTGCCCCTGGTAAGGCCGGATCCCGATCCTTCCCGTTCGGTTGCGGTGGTAGGTGGTGTGGGGGGGCGTCGGCGATCTGGGGGCGGTTGGGCGAGCTGGGTCCAATTTTGGTGGGGGCGCGTGGTTGGATTCCGCGGGTTGTGGGTGGGGTTTGGATGGGGGGGGGGGGGTGTTCGTGTTGTGCGATTAGGGGAATTCGCGGTATGCTGCGTGCTTTTGTTGAATTGTGTGAGAATTTTGGTTTTTAGGTAGTTCTATTGTGGGGTGGGGGGTTAATTGATTTGGGCGTGACTTTGGATCGTGATTCCGGGGGGCCTGAACCGTGCCTTGTGAAATCGCGCTGATTGGAAGGGTACTCGTTAGACCAAATTGTTGTGTTCTATTGTGGGGTTTATGCTTGATTTGGTCGGCGTTTGCTCAGGTCTGGAGGTATTAATTGGAGAGAATTTCAGCTGGTTGAGGCTCTACTGAGTAAAAATGGGTCTTGTGCTGGAACTATGACTATGATTACATAGCATTACCTGATAGAATCATTATGGGGCTTCTGGAATTCTGATTTGGGAATATAACTTTCTTATTTTTCCCATGCTTGGCTTGATGAGTTTTGGCATTAATTAGCTTATTTTCCTAGTACTAAGCTATACACATCATTAGTTCAGAGGTATTGACATAACTGGTAGTTTTGTTGGCAAATATGTCTGTTTGCTCGGAGTATATCCTATAAAAATTGGCATAAATCTTGCAAATCTAGTTTCCGTTAGGGATAGAAGTTCTCGAAAAAAATGAACTATTGAAAGGTATTAGGGGGGATATGCACTACGGTTTTACAAAATCTCAAGATCAATTTCAACTAACTCTCCCAAGTGCAAAAAATCTTACTTGGTGACTAGCGAGCAGTGAATTTGTATGCACTATACAGCAAATGAAAATGAGTTTAACAATGCATTTTACTTGGATACACAATTTATCTGCTGTAGGTTTTTGGCAAATTCGGAAAGCTATACTTTGTTAAAACTGAATTTGAACACCTGTGCCATCTGGACGGTATTGTCCTATGTTTACAGGTTCTTTTTTTTCAACAATATAACATGTTTGTTTGAAGTGTATACTATATTTATTTTCATGGGATCATTTTGGCTTCAGCTGTGAATAACTGAATGCGTTTGCTTTCCACCGTGAAGCCATTTTGAGGCTATGGTCATATGAAGTGTTTATATTCTAAGCCCTTCTTTTCTCCGTATTCTAGATATCAGGGTTGTGATTCCTTTGCAATGGCATCTGGAACTGATGAGAAAGCCAAGATGGAGGGTTTGACATCAGCTGCAGCCTTTGTTGAGGGTGGGATTCAGGATGCATGTGATGATGCGTGTAGTATCTGCCTTGAGGCGTTCTGTGAGAGTGACCCTTCCACAGTAAGATGCCATATCTTCAATTGTATGTTTTTTTCTCATATATGACATTCTTTTAACCATTTTACTGTGTTTCTTTGTTATGTAGTTGACTGGTTGCAAACACGAGTTCCACCTCCAATGCATTCTTGAATGGTATAATATTGATATCATTGGTGAAAAATTCTTATATTTCTGCTGTGCGCTGTACTATGTCTGTCTGAATTTATTTGAGTTGTTCCTGGATCAACTGCATGCATGTTGACATTATATATCAATATCAAACTATTTGGGTCAGTTTTGATTTCATGTGGTCAGGTTTGCATGCTTGAGGTTTTGGGTTGACTGACCTAACATCAACTGTTCTTTTTCCATTGAGGAGTTGATATAAAATTCAACGAAGGAATGAACCAGACTTCTAGTACACAATATCCTGCTTTCTCTAGGGTGCTAATCCCATATAATTTGTGTACTCATGACCTTGATACACCTTCTGTCAACTTTTTACACTTTTTATGTACACTTCTTCCAGTGTACATTAAACGTCAGTGTGACTAGACAATATACCTAATACTTTCAACTATCAAAGTATCAACCTATTAGTATAGTTTTTTTTTTGAGAGAACCTATTAGTATAGTTTCCATGTGCTAATTTCAGTATTTCCATACATATCTATGGATCGCCTGCATACCTTGATTGTTTAATTTTACTGAGATTAAATTTCAGTATGCCCTACTACCTTTGGTAAAAACCATCACAAAATCACATTTTCAAGTGATAGTTTCACAGAACCACATTTGATCTTTCGAAACATTTGACAAAATTGAACTTTAATTATTTCCATCATACTCAATGCGCTTGGCCCCACTTGATAGTTACAAGCATATATGTTCCATTTGTGAATTTGGCTAGGTTTTTGAGACTAACAGCTGGTGTCAATAGAATATAATGGTATTGCTTAAAATGTATTTTGTGAATCCTTTTTTTAATAGAAAAATGAGGCCTGTTATGAATTTTTCTCAAGATTGCAGTTTGTGATAGCTTTAGCAAATGTAGTGCTGTTTTATGAAAATGTACTCCTTTAATAATTGAAGGAGTGCTGTATTATAGAATTTTTCATCGTTTTGTTCATATTACAGTATAGGTAAAGAAGATTTGCTATATATTTATATAGATCTTTCTTATATTGGAATTGTGAAACTTCACTGGTAGTTAACTGGCTGTAACATGTAAGGGGATTTCTCCAGAGATTAATAATAGACTTCACATGGCAAATTCCATTATCAGTTCTTTTTTCTGTGTAAAAAGATTTTTCAGATTGATGATTGGTGGTCCTTTTGCATAGGTGTCAGAGAAGTTCTCAGTGTCCTATGTGTTGGCAGCCTATCAGTTTGAAGGACCCTACCAGGCAAGTCGTCAAAATACATTATTTTTTCTTTGCCTATACAGATATCAGGCAGAATTTTAACATGTAAAAGGATACTAACCTCTGTCCTACTAATGTCAGTCAAGAGCTGCTCGAGGCAGTGGAGCGTGAAAGGAATGTAAGGACCAATCAAACTCGAAATACAACTATATTTCATCATCCTGCTCTTGGAGATTTTGAGGTTCAGCATGTATGTGTTATGAAACTAACTTGAGTTTTGATATATTTCTCCTGATTTGACTAGTGAAGCATTTTTTTAATGTTATCCTAATTAGCAAGATGAACTTTTGCAGTTACCCGTTGTTGGTAATGATGCTGAACTTGAAGAGCGTATATTACAGCACCTAGCAGCTGCCGCTGCAATGGGAAGGTCACACCACCTTGGTAGAAGAGAAGGACACAGGGGTCGTTCTGGCTCTCATGGTCGCCCACAGTTCTTAGTTTTTTCTTCGCATCCAAACATGCCTTCTGCTGGTTCAGTTTCTTCATCGTCCGTTCAAGGGGAAGTTGATAATGAATCAAGTCCTGTCCACACAGCTGGTGAATTATCACTGCATGCTAGCACCCATGAAGAAGCAGGCAATCAAAGTCCTGGGATGCTTACATACGATGCTGATCAAGATGCTGTTGTTTCATCTGGAAATAGTACCCCTGTATCCAGCCCTAGGTTTTTCAACAGGTAAATTGAGTCACCTATATGCATGCACTATGTCCTTATGTTATTTTTTTTTTATGATAAGCAATATGATGATCCTGGTGTATCAGGAGGCATTCCACTGGGCAATCAACTCCAGTAAACAACGACAGAGCTGGGCCATCGGATCTTCAGTCTTTCTCAGACTCTCTGAAGTCTCGCTTAAATGCTGTCTCTATGAAGTATGGAGTTTTATTTTCTTAAGTTGCTTTGAAAGTTATCTATCAACTTTTATATTAAATCTGTTTCTCCTTTTGTCCGGTTCAGGTACAAGGAATCTATTACAAAAAGTACTCGAGGATGGAAGGAGAGACTTTTTTCGCGTAATTCATCTGTGGCAGATCTTGGTTCTGAAGTAAGAAGAGAAGTTAATGCTGGAATTGCGTCCGTATCAAGGATGATGGAGCGTCTGGAAACTAGAGGTAGTAATAATGGTAGAACAAGTGATGGCCCGGCAACATCCACTTCTGAAGTTATTCCCAGTACAGAATCAAGCAATGAGAGAGTTACAGAAAACAATCCAACTACTGCAGCGACAAGTACTAGCAACACTTCTACGTCTTCTGCCCCCTGTGTTACAACAACCGGATCAAATTAGTGCATGTTATAGGTTCTGAAAGAAGGCCTGCACATTCCCATTCTTCTCCATCAAAGGTATTACATTTTTCAACTGAAAGATAATTATTGCGATATTTGTAGTTTAAGTATGCATTGCTTCTAGACGGAAGGGTAATTTAGCCCTAGCTAATATGCACTCAACCGTGGCTGTCTTACCTTGTAATTTAGTCATTTATTTCTAGTTAGGTTAAGGGTTAGTTATTGGTTGACTGTCACATTTGAGAAAATGCCATTTATGTAGAAACGGGAATTTCATTTTTTTACATCCAAGCAAGAGACGCTGCCTACAATTATGTTTAGTTAAACAAATATGGATATGGGTTAAGTCCATTTATTAGCTCATCTTAGTTCAACTGTCTGTTTGACAACTGATTCATGTTACAACGGATTACAGGATTGCCATTGCCAGGCATGGGCAGGTGACCAAAAGCAACGTCATGATGTTGTCATCCTCAGCATTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033772

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033772&oldid=35748"