BGIOSGA033776

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Revision as of 08:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033776| Description = BGIOSGA033776| Definition = Oryza sativa Indica Group BGIOSGA033776, complete gene.| tag = | tid = BGIOSGA033776-TA|...")
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Gene Name

BGIOSGA033776

Description

BGIOSGA033776

Definition

Oryza sativa Indica Group BGIOSGA033776, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033776-TA

Ensembl Protein ID

BGIOSGA033776-PA

Length

2894

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18108474..18111367

Sequence Coding Region

18110773..18111367,18109577..18109881,18108474..18108530

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18108474..18111367 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18108474..18111367 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGGTTTATCTAGGCTCACATTAAGCTCTAACAATTTAACTGGGCTGATACCCAGTTCTATTTGGAACAACATGTCAGCACTAATGGCGTTCACTGTCCAGCAAAATTCGTTAAGTGGAACCATTCCTCCAAATGCATTCAGTAATTTTCCCAGTCTCCAGCTTATAGGAATGGACCACAACAAGTTTCATGGTAGTATCCCTACGTCGATTGCCAATGCTTCCCATCTGTGGTTGGTTCAGCTTGGTGCTAACTTCTTAAGCGGTATCGTTCCTCCAGAGATTGGAGGCTTAAGAAATCTCAAAATTCTACAGCTTTCAGAAACATTTCTTGAAGCTAGAAGCCCCTGCGATTGGAAATTCATAACGGCATTAACAAATTGTTCCCAGTTTAGCGTGTTGTACTTGGCTATTTCTATTTTTGTAGGAGGTCTTCCTGAGTCACTTTCCAATTTGTCCTCTGTGACAGATCTTTTCGTTGACACAAACAAAATTTCGGGAAGCATACCTGAAGATATTGATAACCTCATCAATCTGCAAGCATTTAATCTCGATAACAACAATTTCACAGGGCATCTTCCCTCCTCCATTGGATCATTTGGTTCTGTGTATAAAGGAGAATTAGATAAACAATCTGGTCAAAGTAAAGATATTATTGCTGTCAAAGTGCTAAAACTCCAAACTCCTGGAGCGCTCAAGAGTTTCACAGCTGAATGTGAAGCACTGCGAAATCTACGACACCGGAATCTTGTCAAGATAATTACAGCTTGCTCAAGCATTGATAACAGCGGCAATGACTTCAAAGCAATTGTGTTTGACTTCATGCCTAGTGGTAATTTAGAAGGCTGGTTGCATCCTGNCACAAACAACCCAAAGTACTTAAATCTTCTTCAGAGAATATCTATGCGGCTGTTCGCAGCTCATAAAAGTGATGGATCACTGGCGCATGATTAA</cdnaseq>

Protein Sequence

<aaseq>MSGLSRLTLSSNNLTGLIPSSIWNNMSALMAFTVQQNSLSGTIPPNAFSNFPSLQLIGMDHNKFHGSIPTSIANASHLWLVQLGANFLSGIVPPEIGGLRNLKILQLSETFLEARSPCDWKFITALTNCSQFSVLYLAISIFVGGLPESLSNLSSVTDLFVDTNKISGSIPEDIDNLINLQAFNLDNNNFTGHLPSSIGSFGSVYKGELDKQSGQSKDIIAVKVLKLQTPGALKSFTAECEALRNLRHRNLVKIITACSSIDNSGNDFKAIVFDFMPSGNLEGWLHPXTNNPKYLNLLQRISMRLFAAHKSDGSLAHD</aaseq>

Gene Sequence

<dnaseqindica>1..595#1487..1791#2838..2894#ATGTCTGGTTTATCTAGGCTCACATTAAGCTCTAACAATTTAACTGGGCTGATACCCAGTTCTATTTGGAACAACATGTCAGCACTAATGGCGTTCACTGTCCAGCAAAATTCGTTAAGTGGAACCATTCCTCCAAATGCATTCAGTAATTTTCCCAGTCTCCAGCTTATAGGAATGGACCACAACAAGTTTCATGGTAGTATCCCTACGTCGATTGCCAATGCTTCCCATCTGTGGTTGGTTCAGCTTGGTGCTAACTTCTTAAGCGGTATCGTTCCTCCAGAGATTGGAGGCTTAAGAAATCTCAAAATTCTACAGCTTTCAGAAACATTTCTTGAAGCTAGAAGCCCCTGCGATTGGAAATTCATAACGGCATTAACAAATTGTTCCCAGTTTAGCGTGTTGTACTTGGCTATTTCTATTTTTGTAGGAGGTCTTCCTGAGTCACTTTCCAATTTGTCCTCTGTGACAGATCTTTTCGTTGACACAAACAAAATTTCGGGAAGCATACCTGAAGATATTGATAACCTCATCAATCTGCAAGCATTTAATCTCGATAACAACAATTTCACAGGGCATCTTCCCTCCTCCATTGGTAGGCTTCAAAATCTGCATCTTCTCTCCATAGGGAACAACAAAATTGGTGGGCCAATTCCATTGACATTAGGAAACCTAACAGAACTATATATTTTACAACTCAGATCAAATGCTTTTAGCGGTAGCATACCAAGCATTTTTAGAAACCTTACAAACTTATTAGGACTAAGCCTAGACAGCAATAACTTTACTGGTCAAATCCCAACAGAGGTAGTCAGCATTGTCAGTCTCTCTGAAGGTTTGAACCTGTCGAATAACAACTTGGAGGGATCAATACCACAACAAATCGGGAATCTGAAAAATCTTGTAAACTTAGATGCCAGATCAAATAAATTATCAGGTGAAATCCCTACTACCCTTGGTGAATGCCAACTTCTCCAGAATATCTATCTCCAAAATAACATGTTAACTGGTAGTCTTCCATCACTCCTGAGTCAATTGAAAGGCCTACAAACTCTTGATCTTTCGAGTAACAATTTGTCTGGTTAAATACCCACATTCCTATCAAACCTTACCATGCTCGGTTATCTCAACCTTTCATTCAATGATTTTGTTGGAGAAGTACCTACACTTGGTGTCTTTTTGAATGCTTCTGCAATTTCAATTCAAGGGAATGGCAAACTTTGTGGTGGCGTGCCTGATCTACATTTGCCTAGATGTACATCACAAGCACCGCACAGAAGGCAGAAATTTCTGGTAATTCCTATTGTTGTGTCTCTTGTGGCAACATTACTCCTGCTTTTATTATTCTACAAGCTTCTGGCTCGGTACAAGAAAATAAAATCAAAGATACCATCAACCACATGCATGGAAGGCCATCCTTTGATCTCTTACTCTCAGCTGGCAAGGGCAACAGACAGTTTCTCAGCGACCAATTTGTTGGGATCAGGATCATTTGGTTCTGTGTATAAAGGAGAATTAGATAAACAATCTGGTCAAAGTAAAGATATTATTGCTGTCAAAGTGCTAAAACTCCAAACTCCTGGAGCGCTCAAGAGTTTCACAGCTGAATGTGAAGCACTGCGAAATCTACGACACCGGAATCTTGTCAAGATAATTACAGCTTGCTCAAGCATTGATAACAGCGGCAATGACTTCAAAGCAATTGTGTTTGACTTCATGCCTAGTGGTAATTTAGAAGGCTGGTTGCATCCTGNCACAAACAACCCAAAGTACTTAAATCTTCTTCAGAGAGTTGGCATACTACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATTTTAAATATCACTTTTTGGCCTACAAAGGACAAAAAGGGAAATCACCACCTTGGAAAGAATGTATTGATTAGTACTCCCTCCGTTCTAAAATAAGTACAGTTTTGCACTATTTACGTTTAACATTTGACCTTTCGTCTTATTTGAAATTTTTTTATGATTAGTATTTTTATTGTTATTAGATGATAAAATATGAACAGTACTTTATGTGTGACTAAATATTTTTAATTTTTTCACAAATTTTTCAAATAAGACGGACGGTCAAACGTTGGTCACGACTATCCACAGCTACACTTATTTTGGGACGGAGGTAGTATTGTAAAACCTTGAAAAGTGGTCAAAGTAACAGGTAAAATAAAAATGGATGAGGTAATTTTATTATCGTGTTTAGTTGCTAGCATTGATTTGTACAGGCTATGCAGTAGTATGGTCCTGTTTAGTTCCAAAGTTTTTTTTTTTCAAACTTCTAACTTTTCATCACATCAAACATTCCATACACACACAACTTTTCTGTCACATCGTACCAATTTCAACTAAACTTACAAACTTCAGTGTGAACTAAACACAACAGCGAAACATTGATACAGTCGAGTCGGGTGAATGTGGGACCAACGTGTCACTGAGACTGAGCTGTGGGACCAACATGTAAGTCCCTCCTCTTCCTCCTCCCATTCAATATTGCTTCTATTATTGATCTAATCATTAGGATTTTAGAAGCTAAAATTCCAATCAGGGCCCAAAAATACTCATTTCAAAGGACAAGAGGCAATTGGTTGGCTGTGCCTGTTTTCAGTCTCTGCTGTCCCACTTGGTATAATAAGATGCGCAAATGAATCCACATGTGCTGCACACTAATGCAGAGTAGTTAGAATTTGGCTAGATGTAAGATACCTCTTCCTTTGAACATGAACATCTAGCCACCAAAAGATTGGCCGCAACAGATAACTAGTGATTGGGCATATCCTGGATTATCACAGATATCTATGCGGCTGTTCGCAGCTCATAAAAGTGATGGATCACTGGCGCATGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033776