Os11g0182900

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0182900| Description = Ankyrin repeat containing protein| Version = NM_001072440.2 GI:297611363 GeneID:4349951| Length = 3307 bp| Definiti...")
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Gene Name

Os11g0182900

Description

Ankyrin repeat containing protein

Version

NM_001072440.2 GI:297611363 GeneID:4349951

Length

3307 bp

Definition

Oryza sativa Japonica Group Os11g0182900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4151549..4154855

Sequence Coding Region

4151549..4152295,4152430..4152959,4153050..4153548,4154853..4154855

Expression

GEO Profiles:Os11g0182900

Genome Context

<gbrowseImage1> name=NC_008404:4151549..4154855 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4151549..4154855 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatgaacaatgcaacctactcgaggtgacggcggagaggaacaccgttcttcatgtcgcagcggagaaagggcacatcgagctgatcaaggagctctaccacaggttcatcaaggacaacaacttcctctctcgtcgaaactcggcactgaacacgcctctgcactgcgcagcaagggaagggcacaccggcaccgtgacaaccctagtacatctagcccaggaccgtgtggagaatatcatggggtgccagaacacggccggggacacggccctacatctggcagcgaggcatggtcatggcgccactgtggaggctcttgtcgcggcacacgcaaaggcgacagagctgaacaaagtcggcgtgtctccgttgtacttggcggtgatgagcaggtcggtgcctgctgtaagagcaatagttactacctgcagtgacgcatcagccgttgggccgagctcgcagaatgctctgcatgctgctgtctttcggagcttagagatggttcacctcttattgcaatggaagccagaactggctagccaagtcgactgcaatggtagcaccccgctccatttcgcggcatccgatggcaacagcaaaatcatacgtgcaatcatggccactgcgccacctggcacagtgtacatgaaggactcggatggcctctctgctcttcatgtcgcagctaagttggggcatgccgatgttgtcaagcagttgattgggatccgccctgatgctgtcgagcttcgtgacagccatggtgagaccttcgtgcactccgcagtcagggagaagcgctcctcgatcgtgtcccttgccatcaagaaacacaagcaggtcggtggtcttctggatgcgcaggacggggatgggaacacgccgctccacatcgccgtggttgccggcgcgcctggcatcgtgaatgctctactccagaaggggaaagtgcaaaccgatgtcttgaacgacgatggacacacaccgctagatctcgcttccacatcgcccagtttgttcaatatggtaaggttcgtgatggcattagttgctttcggggcacaatgccgaccacaaaggaatgaccatctgaagccatggagcggccatgacaacatagggaaggggatagagaggacttcggacagcctcgcggtggtggccgtgctcatcgccaccgttgcctttgcagctggattcaacatgccgggcgggtacacgaacgacggctcggcaagcctcgagggcatgtccttgttcagatggttcgtggtcctcgacgccatcgcggtagcatcatcggtgatcgccgtgatcctgctcgtctacgggaaggcgtcgcgctccaccgggtcgtggaagagcttcgtggcggcgttgcactgcatctgggtctcgctcgtcagcctaatcctggccttcttcgcggcctcccgtgccgtgatgagaacctcgacggcagaatccatcgtgtacattgttatctacgtgggcatcatcgttttgtctctctttgtcgcacagtggattggacctgtgacgacggcgcgtgcattctggaggtttttgtggctcagtcaccgggctcacaccgtcaggaggcagtatccgttcgccgtcgcttccatctacaactggcttctcttcttacatataacttatataatgtttgctggtttgggagtggtacataatcactccaattcggatcggggaggattatcaagcagctggaacccgaaccatatctcacctgcccctgcacctatgtaa</cdnaseq>

Protein Sequence

<aaseq>MHEQCNLLEVTAERNTVLHVAAEKGHIELIKELYHRFIKDNNFL SRRNSALNTPLHCAAREGHTGTVTTLVHLAQDRVENIMGCQNTAGDTALHLAARHGHG ATVEALVAAHAKATELNKVGVSPLYLAVMSRSVPAVRAIVTTCSDASAVGPSSQNALH AAVFRSLEMVHLLLQWKPELASQVDCNGSTPLHFAASDGNSKIIRAIMATAPPGTVYM KDSDGLSALHVAAKLGHADVVKQLIGIRPDAVELRDSHGETFVHSAVREKRSSIVSLA IKKHKQVGGLLDAQDGDGNTPLHIAVVAGAPGIVNALLQKGKVQTDVLNDDGHTPLDL ASTSPSLFNMVRFVMALVAFGAQCRPQRNDHLKPWSGHDNIGKGIERTSDSLAVVAVL IATVAFAAGFNMPGGYTNDGSASLEGMSLFRWFVVLDAIAVASSVIAVILLVYGKASR STGSWKSFVAALHCIWVSLVSLILAFFAASRAVMRTSTAESIVYIVIYVGIIVLSLFV AQWIGPVTTARAFWRFLWLSHRAHTVRRQYPFAVASIYNWLLFLHITYIMFAGLGVVH NHSNSDRGGLSSSWNPNHISPAPAPM</aaseq>

Gene Sequence

<dnaseqindica>2561..3307#1897..2426#1308..1806#1..3#atggtgagtattattttaaacagagggagtatatccgaagttatttgggacaaacatgatgtttgcttgaggtgcaaagcgccgatgaaggaggccatacaaattgatgtaatgttagtatcgtaaatcaaaattgtccccattttcaaatacaaatacgtgcacgtctaatcttcatctattcaattcttttaggtacattcgccctaaagttagctacaacattgaaacattcaaacaaatatataaataaatgcatacataggaatacaatttagaaataactgaaattcggaattaaaaataagtaatattgtaagaagagttcatataaaactgaatacgagattaattaaaattcaaaataaaaaaataaaaaaatagaaaaataattataggacttcatgtaggaatacactttataagtaaaaaaaatattggaatgaaaaatatgaaattttgaaaaaaagcagtttatctagatgtcaatgatgacaaataacaataaaaaggagagaagcaatagactcataaaagagtaagatggtggtggttaatggacatctaaaaactataagcaaaaccatgaatagaatcccaatgacgattaagaggaggacgacacacagaccgttaggtagcaaggtcacgatagttggtgggacttatataaagtaaaaaaataaaccgcaatgacaatcattttcgatttttttaatctcaataataataaatagggaaggcaacaatgggcgggccatacaggagtatagtgccggagccggtggcggttggcgggacttctagaaagtaaaaaaataaaccccaatgataattatgttcaaattttaaaatcccaataacaataagtaggggagacaacggatgggtcatagaggagtacaatagcgatgtttgacgacacttctaaacattataataacagaacctgacgagacaatggactctgaaaactagaaggcccaattattaaagatttcaagaaggataaatagaagccatggtaaatcgggaaaacaagatagaagggtgataaaattagagtaagaggtagagactgatgtgactttaaaaacaataaaattaaaaattaagggatgataaggttcaatcttttaaggttctaagacaacgtgatggctatttaacaaattttaagtaatatcatatattagaaaatagataatttaacatgggtgctagccgtgcaattacatgggcgacccagctagttaccatgaaaacaacatttaatgctccaaacacctttttcaggcattattcagcatgaacaatgcaacctactcgaggtgacggcggagaggaacaccgttcttcatgtcgcagcggagaaagggcacatcgagctgatcaaggagctctaccacaggttcatcaaggacaacaacttcctctctcgtcgaaactcggcactgaacacgcctctgcactgcgcagcaagggaagggcacaccggcaccgtgacaaccctagtacatctagcccaggaccgtgtggagaatatcatggggtgccagaacacggccggggacacggccctacatctggcagcgaggcatggtcatggcgccactgtggaggctcttgtcgcggcacacgcaaaggcgacagagctgaacaaagtcggcgtgtctccgttgtacttggcggtgatgagcaggtcggtgcctgctgtaagagcaatagttactacctgcagtgacgcatcagccgttgggccgagctcgcagaatgctctgcatgctgctgtctttcggagcttaggtgagatatcagcttgttgattcgatagctttcaagcacaaaacaagaatgcgttcatcaacttgattgataaagttatgacttttgcagagatggttcacctcttattgcaatggaagccagaactggctagccaagtcgactgcaatggtagcaccccgctccatttcgcggcatccgatggcaacagcaaaatcatacgtgcaatcatggccactgcgccacctggcacagtgtacatgaaggactcggatggcctctctgctcttcatgtcgcagctaagttggggcatgccgatgttgtcaagcagttgattgggatccgccctgatgctgtcgagcttcgtgacagccatggtgagaccttcgtgcactccgcagtcagggagaagcgctcctcgatcgtgtcccttgccatcaagaaacacaagcaggtcggtggtcttctggatgcgcaggacggggatgggaacacgccgctccacatcgccgtggttgccggcgcgcctggcatcgtgaatgctctactccagaaggggaaagtgcaaaccgatgtcttgaacgacgatggacacacaccgctagatctcgcttccacatcgcccagtttgttcaatatggtaagcaataaccaaatatgcgcatgcattgtcccaatgcatcttgatgtagaagttttatatgatatgattattgatcttcatcatataaaagaaacacttacatatatatccatggtgtgcacacaatgcaggtaaggttcgtgatggcattagttgctttcggggcacaatgccgaccacaaaggaatgaccatctgaagccatggagcggccatgacaacatagggaaggggatagagaggacttcggacagcctcgcggtggtggccgtgctcatcgccaccgttgcctttgcagctggattcaacatgccgggcgggtacacgaacgacggctcggcaagcctcgagggcatgtccttgttcagatggttcgtggtcctcgacgccatcgcggtagcatcatcggtgatcgccgtgatcctgctcgtctacgggaaggcgtcgcgctccaccgggtcgtggaagagcttcgtggcggcgttgcactgcatctgggtctcgctcgtcagcctaatcctggccttcttcgcggcctcccgtgccgtgatgagaacctcgacggcagaatccatcgtgtacattgttatctacgtgggcatcatcgttttgtctctctttgtcgcacagtggattggacctgtgacgacggcgcgtgcattctggaggtttttgtggctcagtcaccgggctcacaccgtcaggaggcagtatccgttcgccgtcgcttccatctacaactggcttctcttcttacatataacttatataatgtttgctggtttgggagtggtacataatcactccaattcggatcggggaggattatcaagcagctggaacccgaaccatatctcacctgcccctgcacctatgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0182900, RefSeq:Os11g0182900