BGIOSGA033814

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Revision as of 08:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033814| Description = Os11g0552600 protein| Definition = Oryza sativa Indica Group BGIOSGA033814, complete gene.| tag = OS11G0552600| tid ...")
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Gene Name

BGIOSGA033814

Description

Os11g0552600 protein

Definition

Oryza sativa Indica Group BGIOSGA033814, complete gene.

LocusTag

OS11G0552600

Ensembl Transcript ID

BGIOSGA033814-TA

Ensembl Protein ID

BGIOSGA033814-PA

Length

4936

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17286527..17291462

Sequence Coding Region

17291291..17291462,17291006..17291214,17290791..17290904,17290618..17290699,17290447..17290514
,17290265..17290327,17290036..17290178,17289462..17289564,17289283..17289363
,17288450..17288518,17288311..17288370,17288022..17288174,17287645..17287875
,17286527..17286907

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17286527..17291462 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17286527..17291462 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGATCTCCGTCGCAGTCCGCTTCCGCCCGCCGACAACCGCCGCCCCAGCGGCGGACCAGTCCCCCTCCTCCACCGGCGGCGACCGCGAGTGGCGCGTCGACGACGACACCCGCATCACCCTCCTCCACCGCAGCGCCCCCGTCCCCGGCGCCTCCTTCGCCTTCGACCACGTGTTCGACGGGGCGGCCACGAACGAGCGGATCTACGGCGTGCTGGTGCGCTCCCTCATCCGCGCCGCGGTCGACGGGTTCAACGGCACCGCCTTCGCCTACGGCCAGACCAGCAGCGGGAAGACGTTCACCATGAACGGCTCCGCCGACCACCCAGGCATCATCCCGCTCGCCGTCCGCGACGTCTTCGACACCGCGCGCGAGGTCTCGGACCGCGAGTTCCTCATCAGGGTCTCCTACATGGAGATTTACAACGAAGAAATCAATGACCTCTTGACGCTCGGGAGCGAGAAGCTGCCGATTCATGAGAGCTTAGAGCGTGGTGTCTATGTGTCTGGGCTACGGGAGGAAATTGTGAACAGTGCCGAGCAAGTGTTTAAGCTCTTGGAGCTTGGAGAAGCAAATAGGCATTTTGGGGAGACAAATATGAATGTGCGGAGCAGCAGATCACATACTATTTTCAGAATGGTCATTGAAAGCAGCGCAAAGAACCACATGGATTCTGGAGATGCTATCCGTGTATCTGTCTTGAATTTGGTGGATTTAGCTGGTTCAGAAAGAATTGCCAAGACCGGAGCTGGAGGTGTGCGTCTCAAGGAGGGAAAGCATATTAACNAAAGCTTGATGATTCTTGGGAATGTCATCAATAAGTTGAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTTGACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGGTGCTCCTGAGGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCAAAATGTGTCAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAAGAGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGTGTTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGATCGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTGGCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTCACTGATTCTATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAGTTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAATTTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGATCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAAGCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGCAAGACGTCCCAGTTGGCCTTGCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEKISVAVRFRPPTTAAPAADQSPSSTGGDREWRVDDDTRITLLHRSAPVPGASFAFDHVFDGAATNERIYGVLVRSLIRAAVDGFNGTAFAYGQTSSGKTFTMNGSADHPGIIPLAVRDVFDTAREVSDREFLIRVSYMEIYNEEINDLLTLGSEKLPIHESLERGVYVSGLREEIVNSAEQVFKLLELGEANRHFGETNMNVRSSRSHTIFRMVIESSAKNHMDSGDAIRVSVLNLVDLAGSERIAKTGAGGVRLKEGKHINXSLMILGNVINKLSENGKQRGHIPYRDSKLTRILQPALGGNAKTSIICTGAPEEIHVEETRGTLQFASRAKCVSNCAQVNEILTDAALLKRQKQEIEELRKKLQGSHSEVLEQVILKQRNDMHKSELERDRLAMELDEERRLRETLEHRLAEQQKMLDGISNTSISPDQFTDSIQFESLKTPTSKERPAEFVASRANYSKDVEFSPIPENLGTVADEDLWMQLNKGCVTDLEMLEMTPGFKCAPSLADDKASVATPDEEPIDARCQRLEKDCTADRQQLEDSKAWRAALEEERDTLKRENSSLLDALAKARQDADHLVADRLEALRELDMEKSRMDELKQEIKLFSQAFSLRQGQLTSLYTKSKAIVENCKTSQLALP</aaseq>

Gene Sequence

<dnaseqindica>1..172#249..457#559..672#764..845#949..1016#1136..1198#1285..1427#1899..2001#2100..2180#2945..3013#3093..3152#3289..3441#3588..3818#4556..4936#ATGGAGAAGATCTCCGTCGCAGTCCGCTTCCGCCCGCCGACAACCGCCGCCCCAGCGGCGGACCAGTCCCCCTCCTCCACCGGCGGCGACCGCGAGTGGCGCGTCGACGACGACACCCGCATCACCCTCCTCCACCGCAGCGCCCCCGTCCCCGGCGCCTCCTTCGCCTTCGGTATGCTCCCCCCTCCCTCCCCCTCCCTCCCTCCTCGTTGCCCTCGGCCTCGCGCGTTCTCACGCCTTCGATGCAGACCACGTGTTCGACGGGGCGGCCACGAACGAGCGGATCTACGGCGTGCTGGTGCGCTCCCTCATCCGCGCCGCGGTCGACGGGTTCAACGGCACCGCCTTCGCCTACGGCCAGACCAGCAGCGGGAAGACGTTCACCATGAACGGCTCCGCCGACCACCCAGGCATCATCCCGCTCGCCGTCCGCGACGTCTTCGACACCGCGCGCGAGGTAAATTAATTCGGTTAAACTCTCGCCGCTCTCTCCGATGTCGCGGCCACGCTGAAGCTTTCGTCGTCGGTTCGATTCGATGCTGACCTCTCTCGGCGCAGGTCTCGGACCGCGAGTTCCTCATCAGGGTCTCCTACATGGAGATTTACAACGAAGAAATCAATGACCTCTTGACGCTCGGGAGCGAGAAGCTGCCGATTCATGAGAGCTTAGAGGTAGAAATGGCTTCTCTTTGATGAAAATGCTTGGTGGTTTTTCGTCTAATTGCGATATAGATTTATACGATTCTGTTATTTTTTTCCATAGCGTGGTGTCTATGTGTCTGGGCTACGGGAGGAAATTGTGAACAGTGCCGAGCAAGTGTTTAAGCTCTTGGAGCTTGGAGAAGGTACTATTTCCGACAGGTTAACATTATACCTGTTCAAGCTACCTGTTTTCACGAGTTTAGAAGCTTTTTTTATTCTTGAAACATGGTCTGGCTTTTCTTATAGCAAATAGGCATTTTGGGGAGACAAATATGAATGTGCGGAGCAGCAGATCACATACTATTTTCAGAATGGTATGGAATACTCAATATTTTAGTCATTCCACCAATTTCAAGTCCATAGATAGTTGGAGTAAAGTTGAGATACCAGATGATGCCAATTTTGTGATTTCGTATCATTGTATTGGTTGCAGGTCATTGAAAGCAGCGCAAAGAACCACATGGATTCTGGAGATGCTATCCGTGTATCTGTCTTGGTATGTACTGCTCTCTCAATACATGTATTAAGTAAAAACAAATGTATTGAGAATTGTATGACTAATCAATGTTGCCTTACTTATAGAATTTGGTGGATTTAGCTGGTTCAGAAAGAATTGCCAAGACCGGAGCTGGAGGTGTGCGTCTCAAGGAGGGAAAGCATATTAACNAAAGCTTGATGATTCTTGGGAATGTCATCAATAAGTTGAGTGAGAATGGAAAGCAAAGGTACACATATCGAGTATGGCATGGACTTCTTTCTCATTTGGTTCCCCCCATAGTCATATAGCAATTATGAGTGATGACATCTGCAAGTTGTGTGTAGCTCTGATTTATTATACAATAGCTATCCAAACAGTAATAAACTGCTATGGAAGTTATAATTTTATTGCAAGGAGGAAAGCACAGATTTGGTTGCAAATCAAACATAGGCCTTGTAATAGTCAGTCTAATAACCCAAGAATGTTGTAATCAGAAATTATTGTGAATTTTTTGAACATTCGGAGTTTTGAAGAAAAGATAAACTTTAACCAATTCTGCCTTCATTTTACTAATCCAAAGAAAAATTCGCCAATGAGTAGTTTCTATCTGAATCGAAGAAAAATTCTACGAATATTGAAACTTTGTAAGATCTTGTGTAGTTTTAGTTGCTTAGGTATTTTTTTTTAGATAAAGAGGTGGTTAGTTATTTTGATGCAGAGGGCACATCCCCTATCGTGATAGTAAGTTGACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGGTGCTCCTGAGGAGGTATGCTCTAGGTACTTACAAATTAAATCATGTACTAATAAATCTCTTGTACTTACTTTCCTTTGTTATTGGATCTCCCAACAAAAATGAACCTACAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCAAAATGTGTCAGCAACTGTGCTCAAGTGAATGAGGTAAGTGTTAAGGCATTGCTTGGAATATGGAATTTTGTTCACCTGCATGAATCAAACTATTACCTATGAATTCATGTTATTTTTTATTCAGTTATACCCCATTAGGCCCTAAAACATCAAAATTAAGGGCCCCTTTGAATCAAAGGATTTATATAGGAATTTCATAGGATTCAAATCCTATAGAAAATTTTCCTATTTGGCCCTTTGATTCAAAGGATTGAAGCTTTCTAAATCCTATGAAATTCCTATGGAATGGCACATTGCATGTGGATTTTGGAGGAAATTTAGCAAGAGCTCCAACCTCTTGGAAAATTTCCTTTGAGTCTATCTCTCTCATCTGATTCCTGCGTTTTTCCTGCGCTCCAATCAAATGATCATTCCTGTGTTTTTCCTGTGTTTTACAATCCTCTGTTTTACACTTCAATTCCTGTCAGAATCCTGTGTTTTTCCTATTCCTCCGTTTTTTCTACCCTGCGATTCAAAGGGGCCCTAAGTATATTGTTCTGAACTAATTCCTGTAGCACTATTAACCTACCGCTTATTAAGTCTCACTATTTATAAGATGTCTTGTGTTTGTTTCTTTACGTCTCTTAAGGATGAGGTATAACTTGTATAATATATTTAATAACAGTCATTGCTCTTTCAGTATTCATCCAAATATTGCCCTCTGTCTATCTTACTACATTAAATGACTATTTTTTTTAAGTTCAAATTTATTAGCATGTCAAGCGTTGAGTACCTAATAATAGTCACTGGCATGCCAGATTTTAACAGATGCAGCTCTGCTGAAGAGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGTTATTTGTGTTTATTTTAGGTTTCTCTTCAAACCCAGGTGTGATAACATTATTTAACCTTTTTGTTTTCTGAATGCAGGGTTCTCATTCCGAAGTGTTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGGTAGGTAAAGATTAAAGGTTCTACAATTCCTGTAGAACATGTATATCTCATTTAAGAATGAGCATCCTTTTGTGGATACTGCATACAACCATCTTTTTTTACTTAACTCAAAGTTTCGTGGATTCTTTTCATGTAGTCTGAACTTGAGCGTGATCGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTGGCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTCACTGATTCTATCCAGGTATGTTTATTGGAGAAGTAGCATCATAACAACTTCAATCAGATTCACTAAGTGCAATCTCATGCCATGTGTTGGCTCTACTATTCAAAGCTTCTGCTCTATTTTTCACTTTTTGTTTCTGATCCTTCATTATTGGCCTGTCGCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAGTTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAATTTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGATCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAAGCATCAGTAAGTAACATTACCGGTCCTTGTCTTTCTCTGCTGATTCTGCTGACTTTTCATCCACAACAAAATTGGGTTTTATGCAGCAAACTACTAGTAGTTAATATGGAAATGATAATAGAAATAGATAAATCAGAGATAGTTAATTCATCCGATATGCATAGTTTCTACAGACTTTTGGCACTAAGTTCCCCTGAAAAGACATTGGCTATTTGCTGCATAAATAGTAACAAGTACTTGCAAAATTTGAGTCCTAGATTGCCTTTTGAATCAAATCCAAAGGTGCGTGTTGTCTCGAGAATAACCATTGCTTGTTGAGCATTCAGTGCTCAGCAATTCAGCATCCTCTCTAAGTGGCAACATTTCAAAATTTCAATCTTGACACAAATGCCAGATTTCCAGATATAGTGAAATATGTGACATTTTCCATCAATAGTTTCGAGAGCTAAGGTCAGGACAAAGTAGAAAGTAGACTCTCTTTTCCGAGTGTCCAAAAAGACAACGAAACAGGGATCCTCATTGCTCGGCTTCTAGTTAAAATCTGTCATCTCATGATAAATTGATAATCATACATTTTTAGCTCCTATAATCTGTCCGGTACTCATCAACTCCTGTTAAAAGTTTTCGTCAATCCCCATGTTCATCTATCGAGCTGTCGAAAGCATCGTTACGGAACATGCTGCCAATGAGAACTGACTCCCTACTTTTTACCACTGCTGCCAATCCTTTGTCTTCTCCCACAGGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGCAAGACGTCCCAGTTGGCCTTGCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033814