BGIOSGA033817

From RiceWiki
Revision as of 08:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033817| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033817, complete gene.| tag = OsI_364...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033817

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033817, complete gene.

LocusTag

OsI_36464

Ensembl Transcript ID

BGIOSGA033817-TA

Ensembl Protein ID

BGIOSGA033817-PA

Length

3414

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17240922..17244335

Sequence Coding Region

17244016..17244335,17242279..17242622,17241970..17242145,17241695..17241754,17241402..17241557
,17241225..17241318,17240922..17241061

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17240922..17244335 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17240922..17244335 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACGGCTCCGGCAACGGGCGGCCGCCGGCCACCGCGGCGGCGTGGAACTTCGAGCCGAACGGCGCGCTGCTCGGGCTGACGGCGCTGTCGGTGCGCGGCGTGCTGGGCAGGGTCAAGGCCGGGATGGCGGCGGGCGGCGGCGGAGATGGTGGTGGTGGTGGTGGGCGGGCGGTGATCCCGATGGGACACGGCGACCCGTCGGTGTTCCCGTGCTTCCGGACGACGGCGGACGCCGTGGACGCCGTGGCGGCGGCGCTCCGGTCCGGGGAGCACAACTCCTACTCCTCCTGCGTCGGCCTCGAGCCTGCACGGAGGTCTATCGCGCGGTACTTATCGCGAGACTTGCCATATGAGCTATCAGCTGATGATGTGTACCTGACAAGTGGCTGTGCTCAAGCGATTGAGATCATCTGCTCTGTCCTAGCTCGCCCTGGTGCCAACATCCTGTGCCCAAGGCCAGGGTACCTGTTCCACGAGGCACGCGCCGTGTTCAATGGCATGGAGGTCAGGTACTTTGATCTTCTCCCAGAGAGTGGCTGGGAGGTTGATCTTGATGGAGTGCAGGAACTTGCTGACAAGAACACGGTTGCAATGGTCATTATCAATCCAGGAAATCCCTGTGGCAATGTCTACACTTCTGAGCATTTGGCCAAGGCAAATGAAGTGTATGCACATTTGACGTTTGGGCAGAATAAATTTGTGCCGATGGGGGTGTTTGGCTCAGTAGCTCCAGTTCTTACGTTAGGATCGATATCGAAGAGATGGGTTGTGCCTGGATGGCGACTTGGATGGATTGTGACGAGCGATCCTAATGGCGTATTTCAAAGGACCAAGGTAGTGGAAAGCATCCAGAGTTACCTTGATATCTCGGCTGATCCTGCAACATTTATCCAGGGAGCAATTCCACAACTCATAGAGAACACAAAGGAAGAATTCTTCGAAAAGACCGTCGATGTCCTAAGGCAGACCGCAGATATTTGTTGGGAGAAGCTGAAGGGCATCAGTTGCATCACTTGCCCAAGCAAACCTGAGGGTTCCATGTTTGTCATGGTGAAACTGGATCTGTCCTGCCTGCAAGGCATCAAAGATGACATGGACTTCTGCTGCCAGCTAGCAAAGGAAGAATTGGTGATTCTTTTGCCAGGATGTGCTGTTGGATACAAGAATTGGCTCCGAATCACCTTCGCCATCGAACCGTCTTCTCTTGAAGATGGTATTGATAGGCTCAAGTCCTTCTGCTCGCGACATAGCAAGCCGAAAGTTCACCGGTCTCTTGAAACATGA</cdnaseq>

Protein Sequence

<aaseq>MEDGSGNGRPPATAAAWNFEPNGALLGLTALSVRGVLGRVKAGMAAGGGGDGGGGGGRAVIPMGHGDPSVFPCFRTTADAVDAVAAALRSGEHNSYSSCVGLEPARRSIARYLSRDLPYELSADDVYLTSGCAQAIEIICSVLARPGANILCPRPGYLFHEARAVFNGMEVRYFDLLPESGWEVDLDGVQELADKNTVAMVIINPGNPCGNVYTSEHLAKANEVYAHLTFGQNKFVPMGVFGSVAPVLTLGSISKRWVVPGWRLGWIVTSDPNGVFQRTKVVESIQSYLDISADPATFIQGAIPQLIENTKEEFFEKTVDVLRQTADICWEKLKGISCITCPSKPEGSMFVMVKLDLSCLQGIKDDMDFCCQLAKEELVILLPGCAVGYKNWLRITFAIEPSSLEDGIDRLKSFCSRHSKPKVHRSLET</aaseq>

Gene Sequence

<dnaseqindica>1..320#1714..2057#2191..2366#2582..2641#2779..2934#3018..3111#3275..3414#ATGGAGGACGGCTCCGGCAACGGGCGGCCGCCGGCCACCGCGGCGGCGTGGAACTTCGAGCCGAACGGCGCGCTGCTCGGGCTGACGGCGCTGTCGGTGCGCGGCGTGCTGGGCAGGGTCAAGGCCGGGATGGCGGCGGGCGGCGGCGGAGATGGTGGTGGTGGTGGTGGGCGGGCGGTGATCCCGATGGGACACGGCGACCCGTCGGTGTTCCCGTGCTTCCGGACGACGGCGGACGCCGTGGACGCCGTGGCGGCGGCGCTCCGGTCCGGGGAGCACAACTCCTACTCCTCCTGCGTCGGCCTCGAGCCTGCACGGAGGTCAGAGAAAATCGCCATCAATTACTCTCTCAGCCTCATCGGTTTCATTTCATAATAAGCTAAAATGGGTTATTAGGGAATACTCCCTCCTTCCCTAAATGTTTACCGCCGTTGACTTTTTTAAACATGTTTGACATTTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATAGTATACATAAAAGTATATTTAACAATAAATCAAATGATAAGAAAAGAATTAATAATTACTTAATTTTTTTTGAATAAGACAAACGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTAGGGATGTAGGGAGTACAAATTAATTTGTAGGTAAAACTTTTGTATATGTGTTCTAAGGTTGTGTTTGGAGGTAACCCATGCCTCCCGACACGCAAAACGATGTAATAGTTTAGCATATAATTAATTACGTATTAGCTGAAAAAACTTTAAAAAATAGATTATGATGATTTTTTAAAGCAACTTTCTTATTGGAAATTTTTTTAAAAAAATATACCGTTTAGCAGTTTGGGAAGCGTGCGCGTGGATAATAAAGTAGGGGAAGTTGGGAACTTACATAAACACAACATAAGCAACTTAAAAACCAATGCAAAAAAAGTAAGTTAAAAATATCTTAGAATCAACTTCAGAATTAAATTTAAAATTTAAATTTTGGCTTTGACTTTGGTTTATTAGGCCAACCGATGGTGCCCTCTCTAATTAGCACCTGTTCATGCTGCAAATGTTGCTGTATTAATCCGCTTCTAAAATTTTTTCTTTTCTATTCTACATGGTAAAGATGAAATTTCCTTAGAATTTACCTTACGGGATGAAAAAAGATCAAAGCTTTGCGTTTTGTTCATTCTGAACAAATTGACCAAATCAGCGGAAAACAATGATCTTTAGGCAAAAACAATTTTGGACATCAACTGGTTTGGCTGTCCATAAAAAGGGAGCAATGGTACTGGATTTGTCAAATGATTAGGTTGTTCAGGCATGATATAAACCACTGGTGGCCTCACACTGTGTGACCACTAACTGACAACAGAATCACTATGGAGTAAGCATAACAAACCTGACAGATTACTGTGGAGTAAGTGCATATGGTCCACCCTAAATTTCAACTATGGGTTATATAAGACTTAAAAGTGATCATGTGGTCCACTCTGAAATTTCAGAGTGGCTGAATTTGTACTCTTAAGTCGTAACACACAATCCTCAATCATGACATCTGTGTCTGGGCAGCAAATTTAAAGAGTCTGACAAAATTTAGGCTCACATAGTGTTGATTTCACAAAGATCAATGTACCTGTTTTACTGTTCACAATCCTGGCACATATCTTCCTCACCATAGCTAGACATAAAAATCCTAAAACTGAAGTTGAATTCCAGGTCTATCGCGCGGTACTTATCGCGAGACTTGCCATATGAGCTATCAGCTGATGATGTGTACCTGACAAGTGGCTGTGCTCAAGCGATTGAGATCATCTGCTCTGTCCTAGCTCGCCCTGGTGCCAACATCCTGTGCCCAAGGCCAGGGTACCTGTTCCACGAGGCACGCGCCGTGTTCAATGGCATGGAGGTCAGGTACTTTGATCTTCTCCCAGAGAGTGGCTGGGAGGTTGATCTTGATGGAGTGCAGGAACTTGCTGACAAGAACACGGTTGCAATGGTCATTATCAATCCAGGAAATCCCTGTGGCAATGTCTACACTTCTGAGCATTTGGCCAAGGCAAGTACTGAGTTAATTAGTCATTTCTTTCCTACTGGGGATCATTTTGGGGGAAATTTCAGTGTGTTTGATCAAGGATCAGTGTTTCTTGTAGGTTGCCGAGACCGCGAAAAAGCTTGGCATCTTTGTCATTGCAGATGAAGTGTATGCACATTTGACGTTTGGGCAGAATAAATTTGTGCCGATGGGGGTGTTTGGCTCAGTAGCTCCAGTTCTTACGTTAGGATCGATATCGAAGAGATGGGTTGTGCCTGGATGGCGACTTGGATGGATTGTGACGAGCGATCCTAATGGCGTATTTCAAAGGACCAAGGTTGTTTAAGTTTAACTTCAAACCCTTTTCATACAAGTACTGTTGCAATCAACAACAAAAATCAAGGATATTTGTAGTTTATTCAACAAAGAATGCAGATATTGCAGACTAGCAGCAATCTAAGCTTAATGAAATAGCTTCCACTTTTTGGTATTATCTGAAACCTAACCCTTGGAAACGGTCAAACAACTCTTAGCCTTGATCCCCCTTTTCAGGTAGTGGAAAGCATCCAGAGTTACCTTGATATCTCGGCTGATCCTGCAACATTTATCCAGGTAACTAAAATTGCCTGATCACATCTCTTCTAAAGATAAATTGTACATAACTTGGCAGAATAAAAAGATCAGTGGAGATACATAATATCAAAACATAATGATTTACATTCTACCTTGATTAAAAAAATGTTTTTCAGGGAGCAATTCCACAACTCATAGAGAACACAAAGGAAGAATTCTTCGAAAAGACCGTCGATGTCCTAAGGCAGACCGCAGATATTTGTTGGGAGAAGCTGAAGGGCATCAGTTGCATCACTTGCCCAAGCAAACCTGAGGGTTCCATGTTTGTCATGGTCAGTCAAATATTCTGCTTCACAATGAAGAGAATCAAAGGGAATTTCTGATGGTGTATGATGTTTTGGTTGGCTTGGTGCAGGTGAAACTGGATCTGTCCTGCCTGCAAGGCATCAAAGATGACATGGACTTCTGCTGCCAGCTAGCAAAGGAAGAATTGGTGATTCTTTTGCCAGGTACATTCCTGAATCCTGATTCCTCCCATGCACATCATTTAACTTTCAAAATTCTAGCTCATTCCATCTGTTCGGTACAATTTGTTTTGTCTCTACAATGATCAGTGATTCAGAATTGCCTTCTGTTTGAAATATTAACAACTTGGCAAAAAAAATTGTCCAGGATGTGCTGTTGGATACAAGAATTGGCTCCGAATCACCTTCGCCATCGAACCGTCTTCTCTTGAAGATGGTATTGATAGGCTCAAGTCCTTCTGCTCGCGACATAGCAAGCCGAAAGTTCACCGGTCTCTTGAAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033817