Os11g0183900

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0183900| Description = Similar to Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (Nucellin- like protein)| Version = NM_001072445...")
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Gene Name

Os11g0183900

Description

Similar to Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (Nucellin- like protein)

Version

NM_001072445.1 GI:115484502 GeneID:4349956

Length

4261 bp

Definition

Oryza sativa Japonica Group Os11g0183900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4230520..4234780

Sequence Coding Region

4230650..4230813,4231846..4231963,4232405..4232637,4232713..4232949,4233711..4233849
,4233931..4234113,4234207..4234276,4234362..4234474

Expression

GEO Profiles:Os11g0183900

Genome Context

<gbrowseImage1> name=NC_008404:4230520..4234780 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4230520..4234780 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgccgcggcaaggtgggccccggtcgtcggcctattgggcctcctgctgctcccgttcgcgcctgctccggcgggagccgcaacgcccgcgaggtcgccgccgtcgtcggcctcctccgccgtgttcctcctcagcggcgatgtctaccccaccgggcattactatgttactatgaacattggggacccagcgaagccgtacttcctggatgtcgacaccggcagcgacctcacctggctgcagtgtgacgctccctgccagagctgcaacaaggtgccacatccgttgtatcggccaacaaagaacaagctagtaccgtgtgcaaattcaatctgtactgcgttgcacagtggatctagccctaataagaagtgcaccacacaacaacaatgtgattatcaaattaagtacaccgacaaggcatcttctctcggtgtgcttgttatggacagtttctcactgcccctgaggaacaaatccaatgttcgtccgagcctcagttttggctgtggatatgaccaacaagtggggaaaaatggtgcagcaccagcaacaacagacggcttgcttgggcttggtaggggatcagttagcttgctctcacagctcaagcagcaagggatcaccaagaatgtactcggccattgtctcagcaccagcggagggggattcctcttctttggggatgatatggttcccacttcacgcgtaacttgggtatccatggtccggagcacgtctgggaattactactcacccggctcagcaacactgtactttgatagacgttcactgagcacgaagcccatggaggttgtatttgacagtggtagcacatatacatacttttctgcgcagccataccaagcaactatttctgcgatcaaaggtagtctcagcaagtcacttaaacaggtttcagatcctagtcttcctctgtgctggaaagggcagaaggcattcaaatctgtttctgatgttaagaaggacttcaagtcattgcaattcatctttggtaagaatgcggtcatggatatccctcctgaaaactacctcattatcactaaaaatgggaatgtgtgcttgggcatccttgatggatctgctgctaagctgagtttcagcataattggagacattacaatgcaggatcagatggtgatatatgataacgagaaagcacagcttggttggatccgtggatcatgtagtaggagccccaagtctattatgtcttcctttccatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAARWAPVVGLLGLLLLPFAPAPAGAATPARSPPSSASSAV FLLSGDVYPTGHYYVTMNIGDPAKPYFLDVDTGSDLTWLQCDAPCQSCNKVPHPLYRP TKNKLVPCANSICTALHSGSSPNKKCTTQQQCDYQIKYTDKASSLGVLVMDSFSLPLR NKSNVRPSLSFGCGYDQQVGKNGAAPATTDGLLGLGRGSVSLLSQLKQQGITKNVLGH CLSTSGGGFLFFGDDMVPTSRVTWVSMVRSTSGNYYSPGSATLYFDRRSLSTKPMEVV FDSGSTYTYFSAQPYQATISAIKGSLSKSLKQVSDPSLPLCWKGQKAFKSVSDVKKDF KSLQFIFGKNAVMDIPPENYLIITKNGNVCLGILDGSAAKLSFSIIGDITMQDQMVIY DNEKAQLGWIRGSCSRSPKSIMSSFP</aaseq>

Gene Sequence

<dnaseqindica>131..294#1327..1444#1886..2118#2194..2430#3192..3330#3412..3594#3688..3757#3843..3955#agcgtcttgtgatctgtcctcctcgtcttccccgcctttcctccgccgcgtcgcctcctctatctctcatcccaacctagagagagaaagcagcagccgcggccgccgctgttcgccctgctcctctgccatggctgctgccgcggcaaggtgggccccggtcgtcggcctattgggcctcctgctgctcccgttcgcgcctgctccggcgggagccgcaacgcccgcgaggtcgccgccgtcgtcggcctcctccgccgtgttcctcctcagcggcgatgtctaccccaccgggtacgtacgcgatcttttgctcctcccctccctgatcgagctggatttcgatacctttgttcgctggagaagaagcagtatcggatcaattggggttcatttgatttgcttattgtttagatgttaaaatcgggatcatttggggggaaagatattggcgtgttggaatttgcatctttggttggtctcttggtgattgcaattagtcgtcgccgttgctctgtgggcgttgctgctttgttggtcttattttgtattatttttgaccaagtcgccggcagaatttttctaaacctgtccactcttttctctttcttcttctcagaatccgatgatgatctgctctctatttgtaaattaaattcaagtgcagtgcaatgtagtatcatgtatgtgttgttcacagctctgcacttattcattcagtccagtttgctctgtttgaattgagcaaacttaggtggtgtttggatctagggacttaactttagtccttgtctttagacactaatttagagtattaaatataaactacttacaaaactaattacataaatgaaagctaattcacgagacaaattttttgagcctaattaatccataattagagaatgtttactgtagcatcacataggctaatcatggattagttaggcttaatagattcgtctcgtgaattagtctaagattatggataggttttattaatagtctacgtttaatatttataattaatatccaaacattcgatgtgatagggacttaaaagttttagtcccatctaaacagggccttatcttcttaccaaatgttacagtttgcttcttcttctttttttttttttttaaaaaaaagagagaacaaaatgttgcagtttgactgtttgagagtatatattgactgattgtagttttaatctaattttacttgttcaagaactaagactgaaactctgcttgctcttttcccctgccagtttgtttcagatgctgtgcgatttgactaattgctttgtttcatttggaaatgcaggcattactatgttactatgaacattggggacccagcgaagccgtacttcctggatgtcgacaccggcagcgacctcacctggctgcagtgtgacgctccctgccagagctgcaacaaggttcaacctatgccaaacaataatttgcacataatcatatcaaaattctcgtctttatcagttaactttaggcattgtgcttggcccaaataactttgcccatttctttgtgtagttcttgattcattgctctgctcataacttatcattgctgtagggatgtcttttagtgacaatttagatttatcttctattttcaaaagtagaatttatattgaattttgtagccaattttctcagtggttaagtttaatcccagaacagataccttctttggtatcaaaattgcatactttgattaactatttaggttcaggattgttgctcagtcttacatggtttgtttagtggccttcctctggtaggaaatgtgcaatctcagcatgatctttggtcccagaaatttggcgcttgatgttgtctttctaatggtttttgcaggtgccacatccgttgtatcggccaacaaagaacaagctagtaccgtgtgcaaattcaatctgtactgcgttgcacagtggatctagccctaataagaagtgcaccacacaacaacaatgtgattatcaaattaagtacaccgacaaggcatcttctctcggtgtgcttgttatggacagtttctcactgcccctgaggaacaaatccaatgttcgtccgagcctcagttttgggtatactacttggtgaaaacattgcatagttagagctaatggatttagttgttgatggttccttttgttgtgcagctgtggatatgaccaacaagtggggaaaaatggtgcagcaccagcaacaacagacggcttgcttgggcttggtaggggatcagttagcttgctctcacagctcaagcagcaagggatcaccaagaatgtactcggccattgtctcagcaccagcggagggggattcctcttctttggggatgatatggttcccacttcacgcgtaacttgggtatccatggtccggagcacgtctgggtaattacctgtccatggagttttactttgctgctgaaatatattcatcatcatttatgtttgcttgctatattaccagatgaacttatcattatctgattcccatgtcttggttagcagtaataatgtcgtaagtttagtgcacaatttcttaactttacataagagcagttcattaagtgtttcagaaaaaaaaggcatcaagatcttgggtttgttttaagatccaaatttggtgttgtttttcgtattttgtgttattcttgatcaacattgcaatgtcaaaggttgttcagaacacaacacctcgattgtgttgaaattgataatttttgttggaagttattatccctttctgtatctttgtgatcgcagggacaggggatactagttttcacgttggttttgcttaacatcttgctgatcgttcttctgcacaaccatttttaccctgtttactgtttccactttataacagcatggatacttcgaaactaatcaacatgtttcaaatttattgaggaaaggtggcactttggcttcttagattgtgtgaaatcagaatctaggttcatctttaaaaaaaaaaaaaacttttctagggctactgtctaaattgaaggcatgctagggagtacctaagatatacacacttgataataaaatataataatttgcaagtaacataaggacttcagttaattttttttacttccattcatctggtttaacacatgatacactattgtcttttttaccaggaattactactcacccggctcagcaacactgtactttgatagacgttcactgagcacgaagcccatggaggttgtatttgacagtggtagcacatatacatacttttctgcgcagccataccaagcaactatttctgcggtaaatttcaaccgtacaacaatctacttgccatgaatttgacaacacagacatgtctaatgaaatgtgtaaatcttgcagatcaaaggtagtctcagcaagtcacttaaacaggtttcagatcctagtcttcctctgtgctggaaagggcagaaggcattcaaatctgtttctgatgttaagaaggacttcaagtcattgcaattcatctttggtaagaatgcggtcatggatatccctcctgaaaactacctcattatcactgtaagtattcgacgattctattggcaactagaaatgaactacttttttttattgaaaatgatggctaaatttttctttctatgtatgtgacagaaaaatgggaatgtgtgcttgggcatccttgatggatctgctgctaagctgagtttcagcataattggaggtacaaagttcagatatcatcgactgtttctgaaatttggacatcatgcatctttgtgtaaccaatgctttttacccttttgcagacattacaatgcaggatcagatggtgatatatgataacgagaaagcacagcttggttggatccgtggatcatgtagtaggagccccaagtctattatgtcttcctttccatgatcatccctcacatttgatccatgagctggacatccgcttaatcataattggatgtatcactgatggagttggagaaagttattgctagcctcaagtcaccagtactgtgtaagtgaagaatgacaatctgttgccatccaaataaagtctgtactcttaaacacaaatggatggagaaataagatgaaatgagagaaggatgagcatgtaatagtaatagaggctgataacaaggcactaacctgtattctcctgttcatggtgaataatcatgtgccatttatttggaaccaaaattttggatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0183900, RefSeq:Os11g0183900