BGIOSGA033910

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Revision as of 08:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033910| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033910, complete gene.| tag = OsI_362...")
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Gene Name

BGIOSGA033910

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033910, complete gene.

LocusTag

OsI_36278

Ensembl Transcript ID

BGIOSGA033910-TA

Ensembl Protein ID

BGIOSGA033910-PA

Length

5071

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15426305..15431375

Sequence Coding Region

15431320..15431375,15430327..15430360,15429908..15430242,15429593..15429819,15427105..15427255
,15426698..15426995,15426496..15426622,15426305..15426369

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15426305..15431375 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15426305..15431375 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAACGTGGGGAAAACATTGAAGTGAATGTCGATGCCAAGTCTGATTCAGTACTGGCACATATCGTGGGTAATTTACCAGTGGGACAGATCAAAGTTGAACAAAGAAGTTGTGAGTTAGCTATTGATGATAGCAAGATTCCTGGGACATCACTACATCGTGCAACATGTAGCACAGGACCCTGTGTTGCAATCTCAAAACCAATTGAGGAAGCAAAAACGATATACCGCATTCTGTGCCAATGTGACCACCCCAACGTGCTGAAACCCATAGGTGTCTGGAAGAATCCCTCGGACGACGCTAGTGCATACCTGGTACTAGAGGAAGTTGAGGCATCTCTTGGCTCTAAAGACAGAGAATTCATGTTCTCTGTCGAGGACTCTTTCATATATGGTTTTTCAAATATTGGTTTTAAAATTTTCAGGGCGCTATGTAATGTGGTGAATTACATTAACGGACTTTACATGAATAGTGCTGCTGGGACCAGTAGTAGTGTTGCTGGAGCAATTCCGTTGACGCCCATTAAACTTAACTCCAGCATGATATTTTATAAGCTTATGGTAGAAGGGGAGGTGGAGGTTGTGGTGACTGATTTCTGTGTAAGACAACCCCGAGACCTTGTAAAGAAAACCAGGAAGGGTCGCCCAAAAGAAGTAACAATTGAAGATGTCCAACAGTTTAACTGGAGGGCTGTTGGACTCTGCCTGAAAAAAATGTATGGACCAGAAGGAAATGTCAATGAGGAGTTGAAAGATTTAGCTGCATATTTGGAAGGATCAAAACCAGAAGAAGGACCAGTAACATATGATGGTATACTCTGGCATCCAGGAGCATGGGAAGCAAATATAAAAACTCAGTTCATTAGAGAAATTTTTTGGCTGATTGATAAAGAACGAGACAAGTTGAAAACAAAGAAACTAATAGAAACAGAGAAGGGGAAATCACTGATCAAAATAAAGCGTACACTTGGAATAGCAGCAAGTTTAAAAAACTTTGCAGGCAAGGAACTTCAGGAAAATAACTTGCTAGATTCTTTAGAACATTTAAGGACCTACATTGTAGCACATCCTGATATGAGTTATAACAGCACGGATGAACAGGATAAACTTAAATTTGACAAGGTCAGATGTGAGAGACTCATACAAAAAGTCAAAGGAGACTACATGATAAAATTACGAAAAGAAATTAGGAATTTAGAGTGGATAACTGAATCTCCAGTGCTAAGAGATCAAAATAACTACATGGAAAGGTTTTATGAGATGAAAAAGAATGAAATGGAAAACCAGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MERGENIEVNVDAKSDSVLAHIVGNLPVGQIKVEQRSCELAIDDSKIPGTSLHRATCSTGPCVAISKPIEEAKTIYRILCQCDHPNVLKPIGVWKNPSDDASAYLVLEEVEASLGSKDREFMFSVEDSFIYGFSNIGFKIFRALCNVVNYINGLYMNSAAGTSSSVAGAIPLTPIKLNSSMIFYKLMVEGEVEVVVTDFCVRQPRDLVKKTRKGRPKEVTIEDVQQFNWRAVGLCLKKMYGPEGNVNEELKDLAAYLEGSKPEEGPVTYDGILWHPGAWEANIKTQFIREIFWLIDKERDKLKTKKLIETEKGKSLIKIKRTLGIAASLKNFAGKELQENNLLDSLEHLRTYIVAHPDMSYNSTDEQDKLKFDKVRCERLIQKVKGDYMIKLRKEIRNLEWITESPVLRDQNNYMERFYEMKKNEMENQR</aaseq>

Gene Sequence

<dnaseqindica>1..56#1016..1049#1134..1468#1557..1783#4121..4271#4381..4678#4754..4880#5007..5071#ATGGAACGTGGGGAAAACATTGAAGTGAATGTCGATGCCAAGTCTGATTCAGTACTGTAAGTTGTTCCCTTTCCTCTAAGTTTTGTATTTTTTTTCTTCTACTTAGGAAAATTGACCTTCCACCCGAAGTTAGTTGTCCAAGTGGCTTTTGCCCCACGGTGGATATATTGGACTTATGATTTACTCCAAACTGTAGTGAAAACTAGTCGTTTTGGCATATTTTAAGCTTTTACCTTCCATAGATGCCAAATTTGCCCTTGTATATTTCTCTTAGTTCTCCACATGCACATCTATTGGTGGTGTCCCACATAGGCACATAATTTACTGTTCATTAGTAGGAATGGATGTGTTTTGCTCTGAAGGTAACCTATCATGAGCATTGGGCCATCCATGGTCCAACTGTCCAAGATTCACACAGTCAAACCAACGAGACTGATCAGAGCGCTGCCAAGGAGGCCCGCACGAAGGGTTGTACATGAGGGACATGTTAGAGAGGTTTTCTTACAAATAGGATATATGTTAAATTGGATTGTTAGGTGTGGAGAGGTTTTCTTAGAACTGGGGTATATGTTAAATTGGATTGTTAGGTGTGGAGTTTAATTAGTAATACTAAGCAACCTATCAAAACTAAATTATTGTTTTCCTCAAGTAGTATGGGGCAAATCATCAAAACAATTTGCATTTTGGGTTGGGGTGGAACCTAGGTTAAAACTAAATTATTGGTTAGTTCCTTGTGGTGGAACTTACCATGGAAAGAATAAATAGCTGGTAGGTGACATTCTTGTTGACAATGAGACGTCCGTGGTGGGTGTACGTATGTATGCTCATATGGGTGAGTGTGCGCGTTGTGAACGTCTGCGTTTGTATTGTGTTTCTTGAAAAAAAATTGCTTTGGGGGCAAAAATTGGGTGACCTACTTACTTTGGCCTGGTCAACAGACCGCATTTTCCAAGTGCAAAAGTTATTTCTTCTGTCAATTTTTATATGCTCTCAAATGTTGCTTTTTGTTTCTTAGGGCACATATCGTGGGTAATTTACCAGTGGGACAGGTAATTTCACTTGAACTTAGATTTCTTCAACAAAAATCATATGAGTACATGCATGCAGATAACATTTGATATTCTTTTGTGTAGATCAAAGTTGAACAAAGAAGTTGTGAGTTAGCTATTGATGATAGCAAGATTCCTGGGACATCACTACATCGTGCAACATGTAGCACAGGACCCTGTGTTGCAATCTCAAAACCAATTGAGGAAGCAAAAACGATATACCGCATTCTGTGCCAATGTGACCACCCCAACGTGCTGAAACCCATAGGTGTCTGGAAGAATCCCTCGGACGACGCTAGTGCATACCTGGTACTAGAGGAAGTTGAGGCATCTCTTGGCTCTAAAGACAGAGAATTCATGTTCTCTGTCGAGGACTCTTTCATATATGGTTTTTCAAATATTGGTTTTAAAATTTTCAGGTATGATTCTGTTGAAATCAACTAGAACAATATAAATCATACGTAAGCTCATTTATTAACATATTATATACTTGTTTAAATATTGTAGGGCGCTATGTAATGTGGTGAATTACATTAACGGACTTTACATGAATAGTGCTGCTGGGACCAGTAGTAGTGTTGCTGGAGCAATTCCGTTGACGCCCATTAAACTTAACTCCAGCATGATATTTTATAAGCTTATGGTAGAAGGGGAGGTGGAGGTTGTGGTGACTGATTTCTGTGTAAGACAACCCCGAGACCTTGTAAAGAAAACCAGGAAGGGTCGCCCAAAAGGTATGTTTATTGTTAATTGTTTCTACTAAGCCTTGGTTTCACTTATTTAGGTCCATACTGTTTCAAATAGTAAAAAAAGTAGAAACAAAGATTATTTGCAAAGGTTTACAAATGTGAGGGGCGAATCTAGAAAATTGATGTCACATTTGGATAGAATTTGTTATTATTATATTGTATTATCTTCTAATCAAGAGAGAAGATCCTGAATTTCCATGTATGCCCTTGGAACACTTGAACTTGGAAGACCCTCCTTATCCTCGGTCCTCTGTGTATACTGTCCACAGTCAAGTGAATCATTATGAGCGTGATATTTCTTAGTTCTCCCCTCCCCCACCATCTTAATTATCAGCATTCTTCTTCAACAATTATGGAGCTAGAGGAGGCGGGTACCGATGCACGAACAGGCCATTACACTTCTCTTCTCATGGATTCTTTGTGTCGAAATACCATCTTCCATTTCCTGGATTCCATTCTTTTAGATAATAGAAATGGCCACAAAAGAATCTCTGGCCTCTACCATTAGGCACAGTGCCGTTGAGTTCTATTGCTGAATATCCTGGATTCCATTAAGTCAAAGTCCTATATTCTATTCCCTGGGATTCTTTTGTGTCAAAACCTCATCTTGTTACAAGGGCATGTTTGGTTTGTTTCCCAAACCAACCCTGGGGCAGATGTTGGATTACCAAAGTTTGGTAGAGTTGGGATATGTTTGGTTTGGAACCTTGCCAGATTTTTGTTAGAGTTTTAAGAGTGGAAGCTTCTAGAATATTTATTGTGTCTTGGTATGGTAGCAATGATTTAAGTGTCGCGGTTGGTTGTCCTACCAAAATTTGGTAAGGTTTTATGTGCCAACAAACCAAACAAGCCCTAAATCACGGATTAAGTTAATTCTTGAGCTAGTATGATGCTCCTTCCATTTATAATCAATCACCATATAATTTTTCTGATGTTATTCCCAAATGATCATATATTAGTATGCATTCCCTAAGTCTTTTCGTTATATGCATATGAGAGTAAATGGACATTGGTGCATGCATCCATGCACACAACCCTTTACAACCAACATGCAATATCTTGGTTTGTTATTGGCTAGGAAATAATAGGGATGGTGCATGCATCAAGTTTGTTATCGGAGTAAATGTAGTATGAGAGAGTTATTGGCTTTCCTTGGTCTTGGTGTACTCATGTAATATGATTATCAATTAGGAACGGAGGGAGTAGTGTGTAAGTGAGTTGCTGTGAGTTTCATGGGTTCAAGAAGGCACTAATATGGTCCTCCTTTTTAGCTAGTTCCTAGTTTATGGTGTAAGCATTTAAGCTCTAGCTTATGTGTTCCTGAACCAATAGCCCACCAAGTTCATTATATTTGATGATTACAGCATGGACTTTGATGTTTGCCTTGTCGATCATCATGCTCACAATCTATTCAATGAAATGACCGTGCACAATTGGGCAATCGTAATCATGGCTGGCCCCCGGCGATTATCATAATTTCTTTTCATGTGTTCATGGGGTGCCAATCCGGGTCTTCGGGATACTATTGTGGTGGTATCACGATGTTTGGACCAGGTGGTACAGGAGTTTTTTACCCAGGAGCATGGTTGGCGATCTAGTCTACGGATTGATAGCCACTAATATTTCTGTTTTGTGAGAGGGGTCTTCATAGGTCTTTCTTTGTGTGTGGCTGTGTGCATTTTATGCAGAGGCCGGGAGTGGGCTCAATTGAAATGTATCATCTTGGTGTATTTGACTGAGTTTTTAATAAAGCTTTCATTATCAAAAAATGGGGTGCCAATCATCCCTTAATCGTTAGATGTGCTCAATTGTTGTTAGGTGTTGGGGTGACAGTACATGATCTACCATACCAAGGGCAAACCTCCCTGTATGGATGGAGAGCCCTATGCTATGTTTGTTCCTCAATGCCAAGGAGATGGGAAAGAAACAGAAAAGAAGGGAACAATTTGGGCATATATTATATAGTCTCCAAGATATTTGAAAACAATATTTCTAATAGCTCAGTGTTTTCTAGCCAAAGAGGAACAGTTTGGAGTGTCTTTGAGCTGAGCATGATTTTCAGTGTCACAATGTGAATAACAAGTTAAGCCCTTAATTGCCCCCTTTTTTTCTATGTTTTCCTTTCCTTTTTTATGTGGAAGTTGTATACAGAACCCCCCCTACCAAGCTTAATACAATGATACACATTTCTTGTGCGTATTCCCCCAAAAAATGTGAGTAGCACACGTTTACAATTCCTCATACAGATAATTTTGCCATAGTAGTACCCTTCATTATGTCAAGCATTTTGATGTCACTTTTTCTTTTTTTTAATATAAACAGAAGTAACAATTGAAGATGTCCAACAGTTTAACTGGAGGGCTGTTGGACTCTGCCTGAAAAAAATGTATGGACCAGAAGGAAATGTCAATGAGGAGTTGAAAGATTTAGCTGCATATTTGGAAGGATCAAAACCAGAAGAAGGACCAGTAACGTGAGTCAACTATATTACCTACTGAAAGAACTGAAATAAAGTGGTGTTGTTCGATCAGTAAAATTGTGTTATTTCACTCACATCATCATATGCTTTTATTTCCATGCAGATATGATGGTATACTCTGGCATCCAGGAGCATGGGAAGCAAATATAAAAACTCAGTTCATTAGAGAAATTTTTTGGCTGATTGATAAAGAACGAGACAAGTTGAAAACAAAGAAACTAATAGAAACAGAGAAGGGGAAATCACTGATCAAAATAAAGCGTACACTTGGAATAGCAGCAAGTTTAAAAAACTTTGCAGGCAAGGAACTTCAGGAAAATAACTTGCTAGATTCTTTAGAACATTTAAGGACCTACATTGTAGCACATCCTGATATGAGTTATAACAGCACGGATGAACAGGTGAATTTCTGTCAAGCAGATTATATTAAATTATAGTTCCATTCTTTTATTCTAAATGTACTATTTGTTTTTCAGGATAAACTTAAATTTGACAAGGTCAGATGTGAGAGACTCATACAAAAAGTCAAAGGAGACTACATGATAAAATTACGAAAAGAAATTAGGAATTTAGAGTGGATAACTGAATCTCCAGTGCTAAGAGGTCAGTGGCATTAAATCAAAAACTAAAATCAGTGATGTGTTTTATTTATCCTGAAAAAGAAAAGAGCAATTTATATACAGAAACATTTTATGGTGGAGGTCTTACTATGTTCTAATTTTCATGCAGATCAAAATAACTACATGGAAAGGTTTTATGAGATGAAAAAGAATGAAATGGAAAACCAGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033910