BGIOSGA033913

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Revision as of 08:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033913| Description = Os11g0517200 proteinPutative uncharacterized| Definition = Oryza sativa Indica Group BGIOSGA033913, complete gene.| t...")
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Gene Name

BGIOSGA033913

Description

Os11g0517200 proteinPutative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA033913, complete gene.

LocusTag

OS11G0517200

Ensembl Transcript ID

BGIOSGA033913-TA

Ensembl Protein ID

BGIOSGA033913-PA

Length

5596

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15313211..15318806

Sequence Coding Region

15318162..15318806,15317342..15317546,15316563..15316615,15315706..15316079,15315492..15315622
,15314748..15314883,15313413..15313722,15313211..15313342

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15313211..15318806 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15313211..15318806 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATTATCTCGCGGGTACGGCGTCATGCCCGACTGCCATCAACCGGGTTCCGGATCCGGTGCGATCGCGCCCCGTCGGAGTCGGGAGCGGGAGCGGGTCGGCCTCCGCCTCCGATAAGTGCACGCATCTCTGCGCAGCGCGAGGCCGCCATTCTGTTTTTCGCCTCGGGGAGCTAAGCCGCCGCCAACCCGCTACAAAACCCTCGCCCTCATCGTCGTCGCCTCCGGCGGCGGCCGCGGCCCCACGCACCGCCCGCTACCCCACCGTGCGCGCCGCGCTTGGCCAGCCCGGCCGCGGCCCCCCTCACCGTCACCGACCAGGTAGGGAGGGCTGGAGCGCAGCCATTCCGGAGAGTCGTCGCCTCCTCGCACCGAGCGAGCAGGAAGGTAGCGGGGGCGCCGTGCGCGGCGACCAGGCAGGGACGGACGCGGGCATCCATCGCCTCGTCGGGCCCCTCCACTCCCTCCCCCAGCTCGCGCCGCCGGTTGACGCGGCGCAGCCGGAGCCCCCCCAGAGCGCGCGCTGCATCACCTTCGCCGGCGTTCGTTTCGCCCGTACCTGCGGAGGCGGGTCGCCGACACCGAGCGCCTCCGTCGACGCGACGCCGCGGCCTGTCTGCGACTCCTCCTCCTTTTGCCCCAAGAGCGCTTGCCTTACTGCCGACAACCTTCAACGCAGGGGCTGGCATCTTGCCCCAATTTGCCACCTCTGCTCAAACGGCGGCGAGTCATGCCACCACATCTTTAGTAGCTGCTCCTTCACTCAGGAGGTCTGGGGCCTTGTCAGAGGTCGCCTTGGTCACCTTCAAACAACACCGTCTGTTGATCTCTCCTGGTGGTGTGATGCTCGATACAACATGGACACGATGTCAGATAATACAAGCCACAACATTTTGTCCCAGGTCAATGGAAGTTCTCAAATAGTCATAACAGACAGCAAGGTCCAAAAACTTGGGAGTTCAGCAAACTATGTGAAATATTATAAGGGTACTGTTAAGTTTGGTAAAGGACTTAGAATACAAACCAAAGCATCTGTGCTTGCATTTACCTCATGTGATGGAGAAGCTGCAGATGCCTTGTATGTGCGACTTGTTGCAGTTAATAGCCCATTCACAGTCAATCCATTGTCATATGGCAGAGGTATTCGAAGGTACAGGGAATACACCTTCTTAGCTGTTCCACCGCCAAGTTGTTTGCTGTCTAACTACACTGATGGATTCAATGATAAAACTGTCAGTATGAAGAGATTCACTGAAGAATTCATCAAGATAACTGGGGATATTGTTCGAGCAATTATCACCCTTCATTGCCAAGGTTACTGGTGTTCTGGTTTGAAAGGGAAACACGTATGCATCTACAAAATGGAGAAGTGTACTGATGCAAAGATTTGGAGTTTTTGCTTTGCAGGGGGAAATGAGGCAAAAAAGTCTGAAGATTGGGTAGACCTTGGCAAATTGCTTGAGCTTGCAGCGAAAAGAAATGATTCGTACACTGCTGAGATTGAAGATCTGTGTAAGAAGTTAAAGAAACAAACTCTGAGAGGGATGAAAGTTCTTAAACACAGTGCATTGTTGAATGTACGAGAAAAATTTGAGAACATAATTGCCCTCAATTTATTCATCTTGGTACATGTAAAAAGTCAACCACAGGTTCCATCTGGAGATCCTGAAAAGGACAAGATCATTAGCGAACTGGTGAAATTCATGAATGCTAGTTTACAATGGGCGAAGGCTATGCCTCACTGGATAACTCAAAGTTCTAATTATCAAGCACCAACCACAGAAACTGGTTTATCTTTCATTGATGGACTAAGAGACCTATTTGAGCATGAAAACGAGTATATTCCAGAAAAGGTTAAACAATCCCAATCGAAAATCCAATTAGTTGGTCGGGATCCAGATCTGGAATGTCAGCTTCGTTTAAATTTGGAAAAGATTTTTCTCCAAGCTCAAAATTTTGTTCTTGAACTGGATATTGAATATTGA</cdnaseq>

Protein Sequence

<aaseq>MNYLAGTASCPTAINRVPDPVRSRPVGVGSGSGSASASDKCTHLCAARGRHSVFRLGELSRRQPATKPSPSSSSPPAAAAAPRTARYPTVRAALGQPGRGPPHRHRPGREGWSAAIPESRRLLAPSEQEGSGGAVRGDQAGTDAGIHRLVGPLHSLPQLAPPVDAAQPEPPQSARCITFAGVRFARTCGGGSPTPSASVDATPRPVCDSSSFCPKSACLTADNLQRRGWHLAPICHLCSNGGESCHHIFSSCSFTQEVWGLVRGRLGHLQTTPSVDLSWWCDARYNMDTMSDNTSHNILSQVNGSSQIVITDSKVQKLGSSANYVKYYKGTVKFGKGLRIQTKASVLAFTSCDGEAADALYVRLVAVNSPFTVNPLSYGRGIRRYREYTFLAVPPPSCLLSNYTDGFNDKTVSMKRFTEEFIKITGDIVRAIITLHCQGYWCSGLKGKHVCIYKMEKCTDAKIWSFCFAGGNEAKKSEDWVDLGKLLELAAKRNDSYTAEIEDLCKKLKKQTLRGMKVLKHSALLNVREKFENIIALNLFILVHVKSQPQVPSGDPEKDKIISELVKFMNASLQWAKAMPHWITQSSNYQAPTTETGLSFIDGLRDLFEHENEYIPEKVKQSQSKIQLVGRDPDLECQLRLNLEKIFLQAQNFVLELDIEY</aaseq>

Gene Sequence

<dnaseqindica>1..645#1261..1465#2192..2244#2728..3101#3185..3315#3924..4059#5085..5394#5465..5596#ATGAATTATCTCGCGGGTACGGCGTCATGCCCGACTGCCATCAACCGGGTTCCGGATCCGGTGCGATCGCGCCCCGTCGGAGTCGGGAGCGGGAGCGGGTCGGCCTCCGCCTCCGATAAGTGCACGCATCTCTGCGCAGCGCGAGGCCGCCATTCTGTTTTTCGCCTCGGGGAGCTAAGCCGCCGCCAACCCGCTACAAAACCCTCGCCCTCATCGTCGTCGCCTCCGGCGGCGGCCGCGGCCCCACGCACCGCCCGCTACCCCACCGTGCGCGCCGCGCTTGGCCAGCCCGGCCGCGGCCCCCCTCACCGTCACCGACCAGGTAGGGAGGGCTGGAGCGCAGCCATTCCGGAGAGTCGTCGCCTCCTCGCACCGAGCGAGCAGGAAGGTAGCGGGGGCGCCGTGCGCGGCGACCAGGCAGGGACGGACGCGGGCATCCATCGCCTCGTCGGGCCCCTCCACTCCCTCCCCCAGCTCGCGCCGCCGGTTGACGCGGCGCAGCCGGAGCCCCCCCAGAGCGCGCGCTGCATCACCTTCGCCGGCGTTCGTTTCGCCCGTACCTGCGGAGGCGGGTCGCCGACACCGAGCGCCTCCGTCGACGCGACGCCGCGGCCTGTCTGCGACTCCTCCTCCTTTTGCCCCAAGGTACAAAATAGCAAACATATGCTCAGCATTTCACCTTCATATGCTTCTATTTTTGGGAATCCTTTTGATTTCTTTAAGATAAACCAAGTTTTATCCATGTTAAACAGTTACATCAAGATAATACAATTACTATGGAGGCAATTACGCTTTTGACTCTGTTATAAAGTCTAAGCCAATCTAACCTTGTTTTCTCAACTTTGCTCATTTCACCCTATGGACATGACCTTATTATGTGAGACAAACGTAATGGTGTTAACTTGGGGCCATAATGCATGCCATTACCTTATTCTCTCGGAATTTGGCACGTCGTATTGGAGAGGCATACTTGCTGTGCGCTGTGTGTCGAGACTTGAGAGTGATAGCTGCACATTGCATTAGCCAAGAGGCTCGGCGGCCTTCACACCAAAGAGACTAGGTCTGGTCATCCTCAACGGTTTGACGGTAGGGGTGAGCATCCTCGGGTGTTGGGCGTCGAAACGGGCGTAGGGGATCTCTGTGGTGGCAATGGGCTGTGGGCGTAAGCATCGATCAGGTGCTCCAAACACTAGACCCTCTTGTGGAAGCCGGGACATAATTGGGGAACGATGCAAATTCTTTATGTTTTGTGTGATGAAGAGCGCTTGCCTTACTGCCGACAACCTTCAACGCAGGGGCTGGCATCTTGCCCCAATTTGCCACCTCTGCTCAAACGGCGGCGAGTCATGCCACCACATCTTTAGTAGCTGCTCCTTCACTCAGGAGGTCTGGGGCCTTGTCAGAGGTCGCCTTGGTCACCTTCAAACAACACCGTCTGTTGATCTCTCCTGGTGGTGTGATGCTCGTAAGTTTATTGCTAAGAAGGAGAGAAAGGTATTTGATGCGGGTGTTATTTTGGTGACTTGGTTAATTTGGAAAGAACGCAATGCGCGTGTGTATGAAGGGAAAACAAGCTCCCCTGTTAATCTATGTGCGACCATCATGGATGAATGGGAGACCTGGACAGCTGCGGGGTTGATTCCAGCTGGCTGATCTGTGGTTGGGGCGGCCCTGTTTGAGGAGGGGTTTTTAGTAGCTTTTCTTTGCCTTGCCCTTTTCTCTTTTCTGCTCCCTGAGTTCTGTTCCTGGGGTGATAGGATAATTTACATTCTCGCATTCTTTCTTAATATACTCTGGCCGGCAAAGTTTTGCCGGCCCGGCGAAAAAATAATTGGGGCAACATGTTGCACCACGCATGATAGTCGCTCGGGAGAATTATAGGATCTCTAGGAGAAAACTACTTTTAATCATGAACATTGGCTTGCGCTACTCCGACGGTTTGGAAACATCTAGATGCACTTCCACTGTGTAACTGTAGTTCTGATACCTTATATTAGTACAGATGAATAGAGTCCCTAAAATCAAGCCTAAAGAAGCTGATTATCACGTTCAACAATTGTAGCATATATGTTGGCATTAAATAAAGGTACATAAACCTGGCCACACCCAAACTAGTCCACTATTGTCTGTTCATTTATAGTTTGCTTTAGAACAGCCCATTTTACTCAAATGCTCGCTATTCTTATTGCAGGATACAACATGGACACGATGTCAGATAATACAAGCCACAACATTTTGTCCCAGGTAAAATTTTGTCTCAAATCTCACTCATCCATTGATCAATGGTAAAGCTAGACATACAAGCATTTTATAGATGGCAAGTTAACTAAAGTGATGTTAAAGGTAGAATATTCCATTGAAATTTAATATTTTCTTGGCACATTCCAATACGCAAATATATTCACTCAATTGTCCATAAACTGCACATATATACTCAATTGCATGTTTCTTTGTTGTGCTGTTCGTGTAGACATAAGGTTCAAAAAACTACATGGTTCAATAGGAACTTTGACAGTGCAAATCAACTGAAATATATTATATGTACTCTCCTATGTGTTTCCAATGAAATATGAAATTTTGTCAAAACTGTTTGAGTATATATTGATCAATCTATATGAAATTCTCCTAAAACACATATATGATTGTTTTGTAGCTTTTTCATGTCATTGTGCTGCTTTCTTTTACTTCTAACCACTTCCTTGATCTATCGGGTTACCATCTTCTTAGGTCAATGGAAGTTCTCAAATAGTCATAACAGACAGCAAGGTCCAAAAACTTGGGAGTTCAGCAAACTATGTGAAATATTATAAGGGTACTGTTAAGTTTGGTAAAGGACTTAGAATACAAACCAAAGCATCTGTGCTTGCATTTACCTCATGTGATGGAGAAGCTGCAGATGCCTTGTATGTGCGACTTGTTGCAGTTAATAGCCCATTCACAGTCAATCCATTGTCATATGGCAGAGGTATTCGAAGGTACAGGGAATACACCTTCTTAGCTGTTCCACCGCCAAGTTGTTTGCTGTCTAACTACACTGATGGATTCAATGATAAAACTGTCAGTATGAAGAGATTCACTGAAGAATTCATCAAGATAACTGGGTATGTCGTTAATGTTTTGGCTTATCTGACTGAATTTATTTATGCTTGTTGATGCATTTACTAATTGTTTTGTGTTTGGTTAGGGATATTGTTCGAGCAATTATCACCCTTCATTGCCAAGGTTACTGGTGTTCTGGTTTGAAAGGGAAACACGTATGCATCTACAAAATGGAGAAGTGTACTGATGCAAAGATTTGGAGTTTTTGCTTTGCAGGTATGAATTTGGCAAAAAAAAAGAAGTGTTTCGACTTATATAGTCAGTATAAATTGCTATGTTCATAGAAAGCCTCTAATAATTTTATAATTACTGGAGAAAATGCATGATTAATTGTGTCAACCTAGAGTTGATATTTCAACCTTGAACTATTGCCTCAATCTTAAAACTTATCATCTCTAAATTCTATAACCATAATTCATGCCTTTATCCAATATGAAGGGGTTTTAAGGTTTAATGGTATCCTAGTTATCGTGAAGTTTATATACAAGTTGACCTTTTAGTTATATATCAGTTGTAAACCAATGAAATTATAGAAATCACTCTATAGGTTACGTGCAGAAGTTGTGAAGAATTCTCTCATAATTAAAATATATAGGTGAGGTACTACTATTATACATCCTAATGACCATGTAAAATACGTATGAAACTTACAAACTACAAAGTAATGTTGACATAGTGCAAATTCATTGTTTCTGATTTCATACTTTTTATGAACGAAATCAAATTGATTCTTAAATTTTATATGGTTGTAAAATACTACCCTGCCCTACATATCCCTCACATTTACCTTCTGTCAAATATTTGCTAACCCGTTATACATACAGGGGGAAATGAGGCAAAAAAGTCTGAAGATTGGGTAGACCTTGGCAAATTGCTTGAGCTTGCAGCGAAAAGAAATGATTCGTACACTGCTGAGATTGAAGATCTGTGTAAGAAGTTAAAGAAACAAACTCTGAGAGGGTATGTTCTTTCCCCTTATTCCTTGGGCATTTTTTGAAAACTACAACAATAGTTCAAGATTTTAACCAAAATCTGCAACTTTGTTTTTGATAGCTCTACGCCCACCTGTCAATTAAACACATACACAATACTTACATTGTTGCAAGTTAGGTCCTCTTATCAGGTGTTAAAGCATGGTTTTTCCTTGGGCGTGATGCGTGGGGTGACCACCTAAGGGTCCTGAAAATTTATGCCCCCCCCCTAATCACTGTGTATACTACATGTATGTATAAGTTTTAAAATGGACATGTTTTATCAACTCATCTATTTAGTGCTTGACATTTTTCCTCTAAAATGAATGTATCTGCAGTAATGGAGGTGAGCCTAAATTTATAGCTATGGATCTATTTGAAACCCCTTGATATGGACATCATTGCATAGCGAGCTTTCCAAAATCTGTTCCTTTTAGCTTGACTCGTTCTTAGATATTACTTCCATGTTATATCTATGGTAAACAAGGAAATAAGAGATTTCTTATAACTTGTTACAAGTTTTATAATTTTCATTTAGTTAAATATTTTACAGAAGGTTGAGTGAAGGAGATTGGCCTTTAAATTTTAGTTGGATAAAGAAAATTCTTTTCATAAGATCGCCTTAATAGAATATTATATTTAAAAAATAAATTTCATAAAACCCCATCTATGGTTAACGGTGTGGTTTTGTAAAACTTTAGGACCATAATACCCGGGGTTATTGTGCACAACTTGGACCATAATAGGTGTGGTTTTATGAAATTTACTCTATTTTAAAACTACATAGCACCAAATTAGATGTAATTCATATTTTATTGAAAAAATGCCACAACTATCTCATCCCAGGACCTCCAAATAGCAGGACCATCTGTTTTCTTAAAAAATCATTTGCTATTGTTGCATTTTTGTGAAATGTTACAAAGTGATAGTTTTGATAATTAGTTGCAGTTTTGTGAAATTTACTCACATATAAATTCTTTAGATGTAATATTGTTTAATGTTTTTATATTTCAGGATGAAAGTTCTTAAACACAGTGCATTGTTGAATGTACGAGAAAAATTTGAGAACATAATTGCCCTCAATTTATTCATCTTGGTACATGTAAAAAGTCAACCACAGGTTCCATCTGGAGATCCTGAAAAGGACAAGATCATTAGCGAACTGGTGAAATTCATGAATGCTAGTTTACAATGGGCGAAGGCTATGCCTCACTGGATAACTCAAAGTTCTAATTATCAAGCACCAACCACAGAAACTGGTTTATCTTTCATTGATGGACTAAGAGACCTATTTGAGCATGAAAACGAGTATATTCCAGAAAAGGTACGTGTTTATAAATACCACAACCGTAACTTTCAATTAGGTATAATTATTATTTATATTTTAATCACAGGTTAAACAATCCCAATCGAAAATCCAATTAGTTGGTCGGGATCCAGATCTGGAATGTCAGCTTCGTTTAAATTTGGAAAAGATTTTTCTCCAAGCTCAAAATTTTGTTCTTGAACTGGATATTGAATATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033913