BGIOSGA033914

From RiceWiki
Revision as of 08:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033914| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033914, complete gene.| tag = OsI_362...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033914

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033914, complete gene.

LocusTag

OsI_36270

Ensembl Transcript ID

BGIOSGA033914-TA

Ensembl Protein ID

BGIOSGA033914-PA

Length

5034

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15304239..15309272

Sequence Coding Region

15309195..15309272,15306463..15306603,15306264..15306344,15305984..15306100,15305640..15305720
,15304765..15304866,15304596..15304685,15304436..15304516,15304239..15304352

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15304239..15309272 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15304239..15309272 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACTGTCCTCCCCTCCGCTGTGCCTGACTCAGCGGCTCCTGTCGCTGGAGATTCAGGGCTCTCAGAGCAGCAGGAGTTTTCTAGAGAAGGCAAAGACAATTGTAGCGCTGAATGCAGCTTTAGCGTCTGGATTGAAAAGCTGAAGAAAGATCTTGAATTAAAGGCGTCTTCTGCTAGTAAGGAACTTCCTGAGGGTTGTGAGTGGAATTGGGAGTTCGAAGAAGAATTTCAGAGGTACCTTCATGTTTATATGGACATCTTACAAGAAGTGAATGCAATGGATGATTGTATGGAGCGTGATTATTTGGACAAAGAAACTCTCTTCCAGAAATTGAAATTTGAATTCAGATATAAGCATGCCATCAACAGCTATCAACATCCTTATATGGTGACCATTTCTTCTCTCCGACAAGTTTCTGATTGTTCTTATGATGTTATTGAAAATCTCAAACAAAATCATGAGATACTTACTGAGATTTCAGACTGTGAAGTGTATTATACTGCTGTAGAGCAAATACGCTTGCACAAAGAGTTTGACAATTATTTGTCCTCTGGTGAACTGGATCATTCTATGGATGAGTTTATTTCTTCAAAGGATGAATTTGTAGAAGATCTCATTAGAGACGAGAGCACGATGGCACAGTTTTCAGATTTGAATCATGCTCTCTTGAAATTGTCTTTGGAGAGGAGAGCTGATGTTCTGGAAAATCAGCAACAAATTTGCATATATTCAGAATGTTTACGACACCTCTTGGAGGATGAGTCGTTGCTTTATTTGTTGTCATCGTCATTCATAGGTGAAGTTAACAGTTTGCTGAATCCTATACTTGCCAATATTGCCAAAGTAGAACAGGGTCCTGTTATTATCGTTTCTAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MDTVLPSAVPDSAAPVAGDSGLSEQQEFSREGKDNCSAECSFSVWIEKLKKDLELKASSASKELPEGCEWNWEFEEEFQRYLHVYMDILQEVNAMDDCMERDYLDKETLFQKLKFEFRYKHAINSYQHPYMVTISSLRQVSDCSYDVIENLKQNHEILTEISDCEVYYTAVEQIRLHKEFDNYLSSGELDHSMDEFISSKDEFVEDLIRDESTMAQFSDLNHALLKLSLERRADVLENQQQICIYSECLRHLLEDESLLYLLSSSFIGEVNSLLNPILANIAKVEQGPVIIVSS</aaseq>

Gene Sequence

<dnaseqindica>1..78#2670..2810#2929..3009#3173..3289#3553..3633#4407..4508#4588..4677#4757..4837#4921..5034#ATGGACACTGTCCTCCCCTCCGCTGTGCCTGACTCAGCGGCTCCTGTCGCTGGAGATTCAGGGCTCTCAGAGCAGCAGGTTTGTGCTTTTTTTTTCCCCTCAGAAAAAAAACAAAAACAGGTAGCTTAGACTGCGTTTTTTTTAATTACTAATGCCAATTACTACTGAGTTTGTTGATATACGAAACCTAAAATTGAAATTGTTGTGGGTTACCAGAAGCCATGGTAGGTTTCTTGTCCAGCAAATGCAACCTGAATTGCAATTGTCCGCTAGTATTAGGTTTTGACCGGCCTGCAAATTCCAGGTGTGCGTGGAAGTATATCTTTACGAAAGCGCAAAAGGATTGCACGTTAATATATTAGAAGTGTGTGGAAGTATATCAAGTTAATCTGCACACCGAAACATAAACGTGCTGTCCTCAAATGGAAGTATCTTGATACTTGCTGCATGTGGCAGACATCGATCCGGTGATACTAACTAACAAGTCTTTCTGTATTGTTGACATTGTTTACTGATTGGTTGTTGTACTGTTTTTCTGCAAAGGGATTATAATGGTTTCAACAAAATTCCTTCTAACTAATAAACAAATGTAGATGGATGAAGTTCTGTGCCAGCATCACAAACTTCTCAATCTCATAAGATGGTAGATGGTTGAATTAGCTCTTTCTTTTAGGAACTGGATTCAGTTAAGTCTTTTAGCATGTTGAATTTGTGTCTTCCTTTTTTGTTCACGGTAAAACTAGTCTTCTTATGGAGATACTATCAAGAAATTTATGTTGAATTTGTGTCTTTTAGCCTCTAATCTTCCAATCCTTTATTGTTCACGGGAAAATTAGCCATCTTATGGAGATACTACCAATAAATTAATGTTGAATTTGTGTCTTTTAGCCTCTTAAAACCCACCACTAAATTTTAGAATGCTTTTCAATCAATAGTTGCAAATCTCACATGGAAAACAATATATAGGCCAGTTTTCTTATAAAAACAAAACACTAAATCCGAGTGCTTTCCAGTGAACAGTGGCAAATCTTATGCATTGATCTTGATCTCATAAAAATAAAACCCTAAATTTGTGTGAATTGCCAAAAAAAAAACTTAATGCCTGTGCATTATCATATTTGCTGAGTAACACGTTTACAATCAATTGTTGCTTTGCTGCTACATGTCAATATCCCTATAAACCTTGTGTTAATTCAAACTAAGTTATACGGTATTATGGTATTGAAGCTATAGTTTTAAGTTGCATATAACTACATGTATAGTATCTGATTAATTTGACCTCTTTGTCTTCAGCTGATTCAATATATACACTCGCTTCGGGAAAATCAAGTTGTTGACGGTTTATTCGAAGATCTTAAAAAAGAAAAACATATGAGCCTTACAAAGCTTGCTCATATACTTAAAATCACTGATGGATTGTCTAACATTAATATCGTGGAGAGTTCTGTTGAACCTAAGACAAGAGCATTGTTAGAGGGAATTCAACAGAAAGTCTAAGTATGCTGTTTATAGTGGTTCAGATATACTATTTCAATTTTTCTACTTGTTAGATATTCTCCTAAATAATCATTCCTTTATTCTTTGTTGGTCCCTTTGCTGGTTCCCAGAGCTTCCTGTCATGAACCTAACTCTCATATAGCAAATATATGTTATGATAATTACTTATTTGCTGCTTTTATATTTCATCCTATAATGGCCTGTGTCATACTGCAGATATGATGGCATAGGTCTATGTCCATCCATTGGTGGATCATTTTCGGAGTTATTGGGTAGTCTATCTCTCAGTGCTACTATCACTAAAGATCTAGGGTCTATGGAAGTGAGGCATTTGAAAAAGCCTTATCCATTATGTAGCTATTCCATTGGTTTTGTGTTGCCCTCCTGAATTCTCCAAGAAATTGGCAATCAAGTTTGTACAACCCATGTTACGACAGTGTAAATTTGTACTTAATTTTGCTTGGTTCAATCATTTATACAAAGGGAAAGCTGAAGTACCATTCCTTTCTGAATTTGGTGAGACAGAAAAGCTACAGCAAAAATTACTACTTGATTTCACTCGTGAAGTTTCAGAATTTCTTGGAGTATTGGCAGTAACAGAAGAAAACTATTTGCAAGATCCTGAATCTATGTCATCAATCTCTCTCTTTAGGTACTACTTTGGCTAACTTGTAATCTACTATCAATGTTATTTTTATGTTCTTTTTTGTTGGATGATAATTTTGATATAAAGAACAAGTAAAAAGCTGCTAATCTTATAGGTTTATTTTAACTGGTGATTGTTTTGACTGGCTGGATATGAGCCTCTTTGGGTACTTTGTGGATGATGAAGCAACAAGCAAGGCTATTCCTTTTTTACGTTCTCTCATTCACCTTGCAACAACTGATGATATGAGTCTCAGGCTCTTCATCGTGGATGATTTGCTTCCATCTATAGTTAGACGTCTAGACAATCAGCTTACTTGTGCAATCCAGTGCCAAAGACACAAACTGAATCCAGGTGCAGCTGATAGTGCTGGCAAGGACCTTGTTGTCCTTTGTCAACAATTGTATAATTATTTTCAAATCCAGGCAAGTCATTCATATTTTTTTTGCTCTTGAATTGAATATTATTATTTTGAACTTAGACGTTCTGACATGCTTTCTGCACTTTCCCCCGTGCTCTGTGGCAGGAGTTTTCTAGAGAAGGCAAAGACAATTGTAGCGCTGAATGCAGCTTTAGCGTCTGGATTGAAAAGCTGAAGAAAGATCTTGAATTAAAGGCGTCTTCTGCTAGTAAGGAACTTCCTGAGGGTTGTGAGTGGAATTGGGAGGTCTGTTCTCTTCCTGTTTGAAAATTCGAGCATCTCAAGTGTTTATTACTCCTACTTAACTTGACTTTTGGTACTCATCACTTCTTACTTTCAATATGTTCTTTTATGTTACAACTAGTTCGAAGAAGAATTTCAGAGGTACCTTCATGTTTATATGGACATCTTACAAGAAGTGAATGCAATGGATGATTGTATGGAGGTAAGTTTATTGGACTAGATACTACTTAGGAAAGATATCTTTGATTTGATAAGAAAACAAGATAAGTATTATGTTATTATAGTCAGGCTTTGGAAATTTCTAGTTGAATAATTTAGCTGGTGGATAGAAATTGTGGTCATTCTCTGATTATATGTTTTTGCAGCGTGATTATTTGGACAAAGAAACTCTCTTCCAGAAATTGAAATTTGAATTCAGATATAAGCATGCCATCAACAGCTATCAACATCCTTATATGGTGACCATTTCTTCTCTCCGACAAGTAAGCGTTTTATATACACTCCATCTTCAAACAGACACGCAAGCAAAGAGGATTCATGTGTATTTATATTGGCTAAGGGGCTTCTTTTTGGTGACTTTGTGCAGCGACAATTTTACACAAGGACTTGCTTCAGATGCAACATGCAGATATATAAATTTCTTAGCGAACTTGTCAAACTGAAACCCTACATTAAGGTACTTATTTGAATTTATTCATTTCATGTTAGTTGAAAGCACAATTTTTTATATCTTAATGATTTGCAGGTTTCTGATTGTTCTTATGATGTTATTGAAAATCTCAAACAAAATCATGAGATACTTACTGAGATTTCAGACTGTGAAGTGGTACCATCAGTTGATGTGGGTACTTCCTAAACTTTAAAATTTATTAGATGTTTTTTTTTAAATTTCACAGTCTTGACATTTTATTTTTGTTTTCAGCTTTTGCTTCATTCTGTGTTGTATATTTGGGAGCCTAGATTTCATCCTTTGATACGTGAGGTGGCTTACGGAAATTCATACATTAATCTCTTATATTTTCCTTTTGCTGAACAGCTAATTAGTAGTGCTTTTTTTTTTGGATTTAGAGCCACTTACACATACTTTTGGGAATAATTAGTCGATTAACCAAGTCAAACGAAGTAGATCACAGTCAGGTTATCCTTGCCCTTCTTTTTTATTGATATATTAACTAAGAGTGCGTTTTCATTTTGATATGGTAACTAAGAGTGCTTTTCATTTTTTTTTTCTTCAGCAACTAGTACCAGTTGTTGGTGATTTCCCTTCACACTTACAGCCTTATGCGTATGCATTTGTTGACAATTAAGTTTAGAGATTCCATGGTATGTGGATGAATACCTGAGTTTATTCTCTCCTTTTTTTCATTTCTACCTGGATTCTAATTCTGAATAATTCCATGGTATTCTAATTCTGCATAACATTACCGGCATGCAGTAGAATAAATACAATAACTGCATTCTTGATTCCATCAATTGACATATATTATGGAAATATGATCTGTTTTTTTTAATTAGAACACTTTTGGTTATAACTGGTAGGCTCTTATAGAAATATGATGCATCACCATAGTTTTTAATGTAACTGCCCTTTCTGTACAGTATTATACTGCTGTAGAGCAAATACGCTTGCACAAAGAGTTTGACAATTATTTGTCCTCTGGTGAACTGGATCATTCTATGGATGAGTTTATTTCTTCAAAGGTAAAAGACTCTGCAGATCACCATTAACATAGCATTATGCTGTTTTCAATATTAACTTTCAATTGTATGTCATTTGCAGGATGAATTTGTAGAAGATCTCATTAGAGACGAGAGCACGATGGCACAGTTTTCAGATTTGAATCATGCTCTCTTGAAATTGTCTTTGGAGGTGCTAATGTTTCTTATGTAATGCTTATCCTTGCAATCTGTTTCATGAATACTCCCTTAGCATGTTTTTCCCCTTGCAGAGGAGAGCTGATGTTCTGGAAAATCAGCAACAAATTTGCATATATTCAGAATGTTTACGACACCTCTTGGAGGATGAGTCGGTATGCAGTATACAATTTATTAATCATCATCAGAGTTCTCTTTTTTATCAAAGTAACCTTTATTATCTGTCCTCTACATGCAGTTGCTTTATTTGTTGTCATCGTCATTCATAGGTGAAGTTAACAGTTTGCTGAATCCTATACTTGCCAATATTGCCAAAGTAGAACAGGGTCCTGTTATTATCGTTTCTAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033914