BGIOSGA033918

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Revision as of 08:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033918, complete gene.| tag = OsI_362...")
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Gene Name

BGIOSGA033918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033918, complete gene.

LocusTag

OsI_36261

Ensembl Transcript ID

BGIOSGA033918-TA

Ensembl Protein ID

BGIOSGA033918-PA

Length

5218

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15221656..15226873

Sequence Coding Region

15226783..15226873,15223402..15223512,15223156..15223288,15222790..15222861,15222574..15222717
,15222331..15222474,15221949..15222029,15221786..15221838,15221656..15221696

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15221656..15226873 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15221656..15226873 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTCTCAGTTTGCAGGAGCAAAAATATCAGTTGTTCTCCTCACTGGCCTTGTTGCTCTTGCAACACTTGTCAACTGCAACACTGAAGAACTACTCAGGTTTTTCAGCAATGGGGGCTCATTCTTCAGCAGCAGCAGCAGCAGCAGCTCTGTTCACTGGCCTTCTGCCGTGGCTACACTTGTGAGCTGCAACACTGAAGGTGACATTCTGTACGCGCAAAGGCAGGCATGGAAGGACCCCTTCAATGTGCTGCAGAGTTGGGATCCAACCCTTGTAAATCCCTGCACCTGGTTCCATGTCACCTGCAACAATAACAACTCCGTCGTCCGCGTGGATTTGGGGTTAGCAGGTCTATCAGGTCCTCTGATTCCACAGCTGGGAGGACTGAGTTACCTTCAGTACCTTGAACTGTATGGGAATGAGCTGAATGGATCAATACCAGCAGCACTGGGCAATCTGAGCAGTCTTGTCAGCCTTGATCTCCAGGGCAACCTGCTCACTGGCGTGATACCGGATTCGCTAGGCGCCATTAGCAACCTGCGAAATCTGAGGTTGTATGGGAACAACCTGACTGGCACCATACCACAATCTTTGGGCAGCCTGACGAGCCTTGTCAAATTGGAGCTTCAGAAGAATTCATTGAGTGGCACCATCCCTGCTTCTCTCGGCAACATCAAGACATTGGAGTTGTTGCGACTGAACAAAAATTCACTTACCGGAACAGTGCCAATGGAAGTCCTCTCCCTTGTCCTTGTCGGCAACTTGACTGAGCTAAATGTTGCTGGAAACAATTTGGACGGCACTGTCGGATCAACTGGGTGGAGAGTGACCACCATCATTCAGGACAATCTGAAGACCTCAGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSQFAGAKISVVLLTGLVALATLVNCNTEELLRFFSNGGSFFSSSSSSSSVHWPSAVATLVSCNTEGDILYAQRQAWKDPFNVLQSWDPTLVNPCTWFHVTCNNNNSVVRVDLGLAGLSGPLIPQLGGLSYLQYLELYGNELNGSIPAALGNLSSLVSLDLQGNLLTGVIPDSLGAISNLRNLRLYGNNLTGTIPQSLGSLTSLVKLELQKNSLSGTIPASLGNIKTLELLRLNKNSLTGTVPMEVLSLVLVGNLTELNVAGNNLDGTVGSTGWRVTTIIQDNLKTSG</aaseq>

Gene Sequence

<dnaseqindica>1..91#3362..3472#3586..3718#4013..4084#4157..4300#4400..4543#4845..4925#5036..5088#5178..5218#ATGGGGTCTCAGTTTGCAGGAGCAAAAATATCAGTTGTTCTCCTCACTGGCCTTGTTGCTCTTGCAACACTTGTCAACTGCAACACTGAAGGTAAACACAAACTATATGATGTGTAATCACATAGGCACGCACCGTTACAAATGCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAGAGTTTTACAAAATTTAATCACTTTGGACCCGTTTTGGGGAAAACAGCTGCAGCTCGAATCTGTGGCCCACCTGTCCAAGAAAGGGAGAAACATATCCATGTAGAGGAAAACATGGATATACGGTGTAAACCCCAACTTAGGTGAAAAATCGTGCAAACCATGAAAAAAATGTCAATTTTTTGGAAGATTTTATTTCATGGTTTATACAGGTTTTCAAGTAGGGTGGGGTTTCCACCACGGTCAATAAAAAGTTGGGATTTCCGGCGTATATTTTGGTCACATGCTGTTGTTTTTGTTCCCCTGTTTCTAGTCCTCTGTTTTTCGCATGGAGAGAGCCCCAATCCTCATGTAAAGTAGCCAAGGAGAGGAACGGCAAATTTTGCAGCCCAAGGGCTCTCTCTGTGTCATTGTTCCTGTTCTGATCTGGATCTGAATTTACCATTTACCGTAGCAAAAAATTATTATTTTTACATATCTTGTATCAGCAGATGTCGACCATCGGATCAAAATACCGATGATTCACATGTCAATTTTAGGGGAGAAGATAGAAATTTGGGGATTAAGCTTGTTCCATTGTATTAGACCAAATGGGTACATAACATGTGTACAAGTGTTGTGAAAAATCCAAAATGACCTTAATATCCTTAACATCATATTGTTTGGGATCCCTATTGTGCAGTTGTAGACTTGTAGTACAAGTACCAACAGAACTTGATTTCTGTTCTGGATCACGGTTGTTGATCAGCGTGAGTGAGCGAACGATCCAGGACATCTAGTCTCCAGGGAAATATGTATTGAAAACTTAGAAAGTACGTATGATCGGAAAAATATAATGATGTTTGAGAGTTGTTCACATCATCTTAAGTAAAATTTTTACTCCCGAAAAATATCAGATGTTTATATTTCGATTCTACGTTAACTTTCCGGTTTGCAATTCATATTTCCGGTTTTCCGTATATCCATGCTCGTTCAATGGCTGCAGTGGGTGTGGTTATACGATTCCTTCACGTAAACCGCTACATGCCGGTGCATTTATTGATGGAGGAAACTTTTCAGACGTTGATAATGCTTGCTAGAACCTTTGCTGAGTTGGTCAACATTTCCCACTTTCAAACCGATGTTCAAATTCTTTGTGGCAAATACTAGTACATTACTGTATTCCGTCAACAATTAGCAACATCACAAATTTAATTATCAGAGGGGACTAGATATTGGGCACCCTAGTTTTCTGAAAAAAAAGAAGGCACCCCCTCATGTGCATGGTGTGATCAGCCTCCTTTGGTGACTCAGTATCTCCTCTGTGTCTCTCTCCCCCCCAAAGTGCATGGATCTGCATAAGCACTCCATTGAAAAATATAGTGCGTATTTTTTTGTTCAAACAAATCTTTTGCCAACATAAAATTGATGTTATTATATTCATATTCAAAATTACTTATGTATCACATATATAACATATAGTATATTAGTAAAGCAATTGTCCATCAATGCTTTGTCTTAACCAAACAAAGTAGTCATATATATATTTTTGGACACGCAGGAGATACGCTTTAGATATTTCAGCGGCAGGAGTAGATCACTAAATTTTGTCATCCTCATACTGTACATACTCTCTTTGATGTCAAGTTTAAAACAACCCCCCCCCCCCGGGCGCGCGCGCACAAAACATGCACACACACACCATGCACGAGAAAAAGTTTTTTTTTTCAAATATAAGTTATTTTAGATTTGTCCACACGTATTTGAAACAAATTGAATAACTTAGTTGTCGTTCATTCATACTATATTGGGAAAGGAAAAGTGTTTATTTGTGTGTGTGGGAGATAACATTTATTTAACATGGGCAAATAAGGAATTATATTTATAAAAGTGACTAAAATTTTGTCTAAAGGTGAGTAAAAGTGATTGGCAACAAACTCCTAATTCTACTTCAAGCGGATGAATTGTGGTTACTATTATCAAAACATGGGGGAAATGTACAAAAGAAGGATAAAAATTACAGGCTAGTGAAAATTTCTGTTTAGAAGTGAATACTCCCTCCGTTTCTAAATATTTGACGCCGTTGACTTTTTTTAAATATGTTTGCCCGTTCGTCTTGCTCAAAAAATTTAAGTAATTATTAATTCTTTTTCTATCATTTAATTCATTGTTAACTATACTTATATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAATGGTCAAACATGTGCTAAAAAGTCAACGGTGTCAAATATTTAGAAATGGAGGGAGTATTTGGAAACTTAAAAAGGAAAGAGTGGGGTTGTGTTGTTCTTGCAACACCTGTCAGATACAACTTCTACATGGTATTATGAATTTTTAATTTCTGAATTTTTTTAATTAAGAAAAAAGGATTCATGTCATGCACACGTAGTAATCATAATTCAGAATTATGGAATTATTTTATTGAACAAAAAAAAATCCTGATTCCAAGCTAAGAACTATCTTTGAAGTGAGAAAGATATATTAGGATGGTTTCTCTACATAAACTTAGAAGTCAAATATGTATTTGCCATTAAAGTTCTAGATGATTGTACTTGATTTGCATTATGCAAAACATCAATAGCCCATGCAAATGCACAAGGTAACCCAGTATTATTGTCAATTAGTTTTCCAATCCATGATCAAAACCAACGGTCTGACATCATTTCTAGATAGGACTTTGGTTGCCATTAACTCATAATGACAAGCTAGAAATTCAATAAGAGAAGTCAGATTAAACAGTAGGAATCCATTCTAGATCAAGACTAATCCTTGCCTACTTCAGTAATAATAGGACTATAATTAGAAGATCTCCGTTCAAACATTTTGACTAGGATTGTGCACATTCTTAACTTGTAAGCTTTGACATAGGAGAGGCATGTAGCAGTGTTAAGAGTAAATTGTCCAATGGCATGTTCTGCATGAAAGGACGTTTATTTGGTCAAAATAATCGATCTGCTCCTGTACTCATGTGGTAGGTTATTCTAGAGCAAGAATAAAATATCAGGTCAATTCGGAAAATCTTTACCAGACCAAAAAAACGTCAGAGTTTCTGGTCAGAAAAATCATTCCCAGGTTTATCTGCACAAATTGTATATAAAGAGCCTTCCCTCTGCAACATTTCATTGTGCCAACTGCCAAGAACTACTCAGGTTTTTCAGCAATGGGGGCTCATTCTTCAGCAGCAGCAGCAGCAGCAGCTCTGTTCACTGGCCTTCTGCCGTGGCTACACTTGTGAGCTGCAACACTGAAGGTACAGACAGTTAGATGAACTACTGTGTTATCATCATGAAAACATATTAGGTGAATTGTTTTCTGAAGATGTATGCTGTTTTGCTATTGTTGTGTGGTCTGAAAAATATGAAGGTGACATTCTGTACGCGCAAAGGCAGGCATGGAAGGACCCCTTCAATGTGCTGCAGAGTTGGGATCCAACCCTTGTAAATCCCTGCACCTGGTTCCATGTCACCTGCAACAATAACAACTCCGTCGTCCGCGTGTATGCCACTTGCTCTTTCCTTGTTCTTCCTTGTTCTCCTTGTTCTCAAGATCAAAATTCTTGATAGGTCTAAGCTTCAAACCATGCGGAGTATACGATAGTTTTCTTCTAAGCTTTAGTAGTTCCTATGATAGTAGTACTTCACATGAATGAAAATTAAAATTCTGATTTTCTTTTTCATTCCTCCTAGATTCAAAACTTATAGTGCCAACTATTGAAAGCCGGATCTTACCGACTTACCGTATGAATTAGATTTCTTGAATTTACAGTACTGAATATTTGTTTCTTGTGCAGGGATTTGGGGTTAGCAGGTCTATCAGGTCCTCTGATTCCACAGCTGGGAGGACTGAGTTACCTTCAGTACCTGTAAGAACTTCAACTAAACTTTCTGTACAGCTCACAAGCCATGTCACTGAAAATGGATTTGGATTTCTGCAGTGAACTGTATGGGAATGAGCTGAATGGATCAATACCAGCAGCACTGGGCAATCTGAGCAGTCTTGTCAGCCTTGATCTCCAGGGCAACCTGCTCACTGGCGTGATACCGGATTCGCTAGGCGCCATTAGCAACCTGCGAAATCTGTATGTAGTTTACGTCCAGTTGTTTCCAGATACAGGTTTTTCCAAAGATTACGGTGAAATTTGTCTGTTGTTTGGATTTGAAAATTTTGTGTTCTGCAGGAGGTTGTATGGGAACAACCTGACTGGCACCATACCACAATCTTTGGGCAGCCTGACGAGCCTTGTCAAATTGGAGCTTCAGAAGAATTCATTGAGTGGCACCATCCCTGCTTCTCTCGGCAACATCAAGACATTGGAGTTGTTGTACGTGAATTTTCCTAAATTTGCCGAAAGATAACTCGAAAGTACAAATTCTAAGTTTTCTCTAATTTACTAGATATAACTACAACGTTTGGACAAGCAAAACCACAAGTTTCTGCAAATACCTCCCAGAGTCCCAGTGATTTGATAATTGGAAGCTTGGGCCATAAAAAAATTCTTGGAATCATATAATTGTGAAATGTATAATCATTGAATTGCAGTATATGTGCGAACATGTTGATTATAAAAAAAAAGATTGGTGTGTGCATTATGAAATGACACTAGTTCTGTTTCGTTTTTACAGGCGACTGAACAAAAATTCACTTACCGGAACAGTGCCAATGGAAGTCCTCTCCCTTGTCCTTGTCGGCAACTTGACTGAGCTGTGCGTAATACTGTTTATTTAATCAATTAAACTAAATTAATCAGATATTATATATAGTGCTATTTTCTACAATTGTTTACACTGACGCAAAAAAAAAAATGTGCCTGCAGAAATGTTGCTGGAAACAATTTGGACGGCACTGTCGGATCAACTGGGTGGAGAGGTATGTAAATCTGCAGCTTTGGTACAAACATAAATCTGATGTTTACGGTTAATTACAAGTTTAATTGCGAAATTGGTATCATTTTGCAGTGACCACCATCATTCAGGACAATCTGAAGACCTCAGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033918

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA033918&oldid=35894"