BGIOSGA033935

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Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033935| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033935, complete gene.| tag = OsI_362...")
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Gene Name

BGIOSGA033935

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033935, complete gene.

LocusTag

OsI_36222

Ensembl Transcript ID

BGIOSGA033935-TA

Ensembl Protein ID

BGIOSGA033935-PA

Length

6861

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14826544..14833404

Sequence Coding Region

14833047..14833404,14828681..14828982,14826544..14827023

Genome Context

<gbrowseImage1> name=IndicaChromosome11:14826544..14833404 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:14826544..14833404 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGATGGCGGCGGGGCCGCTCGCTCCGGCCGCTCCTCCGGCGAGGCCTCCTCGTGGCCGCCGTCTGCGCCGCCTCGCTACTCCTCCTCGTCGTCCTCCACCTCCACGGCCCTGAGCTCCCCTCGTCTTCGACCGCCCGAGCCTCCCCATTCCGGGGCGAGCTCTCCGAGGCGCGGGACTCGGATGACGGGGAGGCGGCGGCGGCGGCGGTGGAGGCTGGAGGGGGCGCCTCCACCACCGGGGCCGCGTGCGCGACGGTGGAGAGGATGGGGGAGGAGGCCGCGGGGCGGGGCTCCCCCGAGGCGGCCAGCCTCCGCGTCCGCGAGCTCATCCGCCGCCACTTCCTCCTCCACGGTGCCAGCGAGTTCAACGCGGGCCAGCTCCAGGAGGAGGTGGCGGATACCGGCGGCAGGGGTGGACTGCTCCTGCGTCGTGGGCGGTTCCGTGGGCGTCGGCATCCTCAACCGGCAGGAAACCCACGGCGGCAGCGGGTGCGACCTCACCGTCAAGGCCTTGGGGAGGAGGCGCAGGGGAGATTGGTTCCTGTACGCAACGGCTCTCGATCGGGTAGCAGCGTTCAGAAGACCAGGAGGCGGCGGTTTTTCAGTCGCTGGCGGCGGCTTCCTCAGGCGGCGAGGAGGATCGGTGAGGCGCTGTTAGCAACTACTTCTGTCCAAAAAGAATCAAATCGTGGAGATGAATATGGAAATGACAAGATTTTTTATGAGACCGAGTTACCATTGCCCTTTTTAGAGTTCAGCCAGCTTCCTTTAGTATGTGGCTGGGGCAAGCTCACCAGCACTGCAGGGAATGTTATGACTCTATCAACGACAGTTCCAGCTCGGCACCAAGCCGATGTTTCTAACCGATCGCACCGAGGACCGGAGGGCTGTCACCACCCACAAATCTCCTCCAGCAGGGCTACTACTCAGGGCTATACTACTGCTGGGAGAAGCTACTGCTCCAACCGGTTGTCCTCCAGACCTCAACTCAATCGTTCAAGGTATGTTATCATTGACAATATCGGTGACCAGTGGAGCGACATCCTTGAATCACCAGAAGGCTGCCGCAACTTCAAGTATCCAACCCTATGTACTAAATCACCTAGCTTGGCCGCTGGCCCCATTGCTAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MPRWRRGRSLRPLLRRGLLVAAVCAASLLLLVVLHLHGPELPSSSTARASPFRGELSEARDSDDGEAAAAAVEAGGGASTTGAACATVERMGEEAAGRGSPEAASLRVRELIRRHFLLHGASEFNAGQLQEEVADTGGRGGLLLRRGRFRGRRHPQPAGNPRRQRVRPHRQGLGEEAQGRLVPVRNGSRSGSSVQKTRRRRFFSRWRRLPQAARRIGEALLATTSVQKESNRGDEYGNDKIFYETELPLPFLEFSQLPLVCGWGKLTSTAGNVMTLSTTVPARHQADVSNRSHRGPEGCHHPQISSSRATTQGYTTAGRSYCSNRLSSRPQLNRSRYVIIDNIGDQWSDILESPEGCRNFKYPTLCTKSPSLAAGPIAS</aaseq>

Gene Sequence

<dnaseqindica>1..358#4423..4724#6382..6861#ATGCCGCGATGGCGGCGGGGCCGCTCGCTCCGGCCGCTCCTCCGGCGAGGCCTCCTCGTGGCCGCCGTCTGCGCCGCCTCGCTACTCCTCCTCGTCGTCCTCCACCTCCACGGCCCTGAGCTCCCCTCGTCTTCGACCGCCCGAGCCTCCCCATTCCGGGGCGAGCTCTCCGAGGCGCGGGACTCGGATGACGGGGAGGCGGCGGCGGCGGCGGTGGAGGCTGGAGGGGGCGCCTCCACCACCGGGGCCGCGTGCGCGACGGTGGAGAGGATGGGGGAGGAGGCCGCGGGGCGGGGCTCCCCCGAGGCGGCCAGCCTCCGCGTCCGCGAGCTCATCCGCCGCCACTTCCTCCTCCACGGTGCGTGTGCTCCTCGCTGTGATCCGTGCGCCTCGAAGAGGAGATTCGATCCCCTTTGATCCTTCTGCCGCTCCTGTTTGTGTCCCTGACATGTGGGCCCGGGCCCACCTGTCATGACTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATTGACTGAGTTCAATAAAAGCTTCCATTATCAAAAAAAAAAATCAGCCAAGGATGTTGAAGAACAGAACAAACTGTATTTTCTGGTGAAAAAAATAAACTATTTCGTTCTATCCACTCAGCATAGGAAAACTCCAAGCTCTACGGCATCTTCTGCATGATCATTTGCAGTAGAATAGTCGTGTGTTCAAGGTGATATTTATAGTCCTAACAAAAAAGAAAAAAAATGATTGAACAGTCGTCTAATTATGGTTTTCCTGTGATATTACATCTGTTTTTTTAACATGTAACATTTTAAATTATGTTTGATCACTTGTCTTATTAAAAAAGTCAGTAAATAACCCTTCTTTTGTTGTGGCTTGATTTATCACCAAATAAACTTAAGCAGTACCTATATATTTTTAAGGTTTTGAATAAGACGAATAGTCAAGATTGTAATAAAAATCAACGACGTCGCATAAAAAAAAATAGAGGGAGTAACTGCTTTCAATTAGGCTTATGCAGGCCTTTCATCTTCTATCTATCTATCTATCTATTATATACTAAAAGTCCATTAAACTTCCTACAAATACTCCTGAGCCGCCATGTGGAGCTTCTATAAACACTCCCAAACCGCCATGTGGCACTGTTTAATCTCACCATTGATTTTTACTTAAACTGGTGGACCCATTAATTTAAACCATTAGATCATATCTATGTGTATAGTTGATTTTCATTTAAATTGGTGGACCCATTATCTTAGATAATCTGCCACAATAAAAAAACTGAAGAAAAAACAAGTCTCCCGTGTATGTACAACTATTCACCGGAGAAAAACATGTACGTTCTATTACCGGGAAAAAAATTACCGTGTACGTACGTATACTACTTAACAAAAAAACGAATAAGAGCATAATGTACTTACGATTGGGAAGATATATGTTTCCAAGTACATATATGAACCTACTATATAAAAGAAAAGGAGGTATCTGAATTTCTATTAAAAAATATTACGAGTACATCACATATTAGCTATATTTTAATTAAAAAATTATCACATAAAATCATATTTAGCTATTTGTGTCTTACTCATCTAAATAGACTTGATAATTACTCTTTTTGTTTTCTTTAAGGAATACTAAGGCTTTGTTTGATCTAGCTAATTAAGTGACTTTATCAGGACACGAAATGATACATATCATTATCACGTGATTAATTGAGTATTAAATATTACAAAAATAAAAATGATTTATTTGTTTTTAGAAAACTTTAATATAGAAAGTATTTGCAAAGCACACACCATGTAATGCACCATTTATCCTTTTGATGATCATACTCGCTACAAATAAATAAAGGAGTAGCTAATCCTATAAGTACTTTAATTAGAACAAACTCTTCAATTTATAACTTAAATACTAAAAGTTTATTAAACTTCTTATAAACATTCCTAAACAGTCATGTGCCGCGCGCGCTTGTACTAACAATCCCAAACCGCCGTGTGACACTGTTTAATCTCACTGTTAATTTTCACTTAAATTGTTGGACCCGTTATTTTAAACCATTAGATTATATCTATATGTACCATTGCTTTTCATTTAAATAAGTGGACCCATTATGTTAGATCAAGATTAGATATATATATGTAATACTAATACCTTCCATATGTATGTACGAGAGAAAATAGGTTCGTCGGGAAAAACAAAAAACATAAGTACGTAAGATTGGGAAAAAACATTAAACCTTAAATACATTCCGACAGCAAGAACAAAAACATGCCCACGTTCTTACGATAAAAAAAAAACATATGGCAAAGAACACGACACATATCAAGCCAAAAAAATATATGTATGTAGTATAAAAAATCAAAAATAGAACTTTCTACATATATAACATAAAAGCCAAAAAAAAGACATACGTACGTAGAACCAATTAAAAAAATCGAGGATCTCTAAAATAGAAATTATACCATATAAAAATAAAATATATTATTCCACAAACTAGATCTAAGATACAATATCAAATATCAATCAAGGTTCTATAAATGTTCACATTTTAAAATATTTCAAATTATAACTTCATGTGTGATCCCGTTGTATACCTTTAGTTAAATATTTTCAAAGTCTGTTATCCTAAATACATCATGACGCATTGGGGCTGACAAATAGTAGTTAATATCATGATAATTATTTAAATAATTTCGCATCATAATTTAGGGTTTCAAAAATCACTTCAAAATTATACGACGCTAATTTAAATCTACATACGTAAAAAAATAAAAACACCAAAATTTAGTTGCATATTTTCTCAAGTAGACATGATTTAAGAATGTAGATTTAAGGCTAAATTTCACAAAACAACAGATGATCAAAGTACCTATAGTTTTGTGAAATTTACTATAATTTTAATTTGTTCGAGATTAATATTCGCAAAGTTTTTTATGAATATTTCAGAACTACTTGGTATTTGAGAAGTGAGTATCATACATGGTATGTAGATGTGAAAATAATCATAAAAAAATATTTTGAGTTAATAATATTGCTATAATATAACCTCTTAATCCATGATGAGATTTATGGTCGTGTATGTATATTTTGTTTCCTTTGCCAAATAGTTTTGACAACAAAATGAACAATCAAATAACATGTCCAATGAACTACTCATGTTATATTTTCTTATGGTTAAAGAATTTCAGCATTTCAGGCATATTGATGGATGTATGTCACATACCTCACCGACGTGACTATAAATATTCTCCCACAAATTAGTTATTGTTAATAAGTTTAAAAATAAATATGTTTTTCAAATTAGTAAAGGTGTCTCATGTGATTATCAACAATAGGTGTTGAAACCCAGTAAAAAAAACAATAGGTGTTGAAAATAAACCAAGGGTTAAACTAGATATATTTATCAAAATATAAATAATAATATGGTGCCCTAGAATTTATCATGGTAGTATGTCTATTTAGTTATAATTTTTTTAGTACCATCGAATGATAACCTCGCTCATTTTCAAATTAGAGTATCCTATATCTATACCATAACCATTTGAGTATTTATGATTAACACGATAAATGGTATCTACAATATACCACAAATATACTCAAAACCTTTTTAAAAAATATTATTTTGATCGCATCCATCTTCACCCATTAGAGAGGCATCTATTTGTAACTTCAATGATGTCGTCCCATTGATTTGTACATGTGTTTTTTTTACAATATTTATATATGGATTTGAAAATAGGTGAGGCATGAAACACTTACGTGTAGTGGTTATTTCGGTGTTTTAATGATGTATTAGGCGTATTTTCTTGGTACATATGTAGTATCATCCATGAATAGGTACATATGTAGTAAGTTGAAGTGATTAGGTATAGAAAGTTCATTACCACGTGATTAATTAGATATTAATTATTGTAAACTTGAAATTTTGATTTTTTCTTTAAACTTCTATATAAAATATTTTTGCAAAAATATAGCGTTTCACAATTTGGGAAGCGTGCTAATGAAAAATAAGAAAGTTGAAGTTTGCAGTTGGAGTATAGAACGGGTCCTAAGAACATTTATATGTAGTCGGGGCAAATGATTTTATTTAATCTAGGAGGCCTCCTTATCATTTAAATATATTAAAATGTACAATCTATTTCACGGAGTATAAATGGTGATATATGACTTCTGTAAGCATTATTTTCGTAAAAGAATAAATCAGATGCCCGCGCATCTGCGCGGATTTTCTTCCTAGTTTTCTAAATGAGTGTATTTGTACAAAACCAATGAAAGAGAGGTATATTTTCAAATTTTAATCAAACCAACCAAAGCAGTGAAGAGATCGGACATGATTTCTTGGGCAGTGGTGGTTTGAGTGACGTACTGCGAGCGGTAGGAGCACGGCTTGGTGTAGTTGTCGTGCAGGTGCCAGCGAGTTCAACGCGGGCCAGCTCCAGGAGGAGGTGGCGGATACCGGCGGCAGGGGTGGACTGCTCCTGCGTCGTGGGCGGTTCCGTGGGCGTCGGCATCCTCAACCGGCAGGAAACCCACGGCGGCAGCGGGTGCGACCTCACCGTCAAGGCCTTGGGGAGGAGGCGCAGGGGAGATTGGTTCCTGTACGCAACGGCTCTCGATCGGGTAGCAGCGTTCAGAAGACCAGGAGGCGGCGGTTTTTCAGTCGCTGGCGGCGGCTTCCTCAGGCGGCGAGGAGGATCGGTGAGGCGCTGGTTTGGGTAGCCCAGCGCATCGGGCGGCGGAGGCGGCTCGATACAAGCGAGCGAAGAAAGACCAAACGAGAGAGACGAAGGGGATGAGTACGACTATTCCCTGGTGGAAAGGATTGGGTTGACCGGCAGTAGCCTGGTAACTTGGGCCACTGTCTCGTTGGGCTTGATATTGTTCGTGTGGAGCTGTTATTGTCCATGGGCACAGAGTTACTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGACGCTTTTTAAACTGCTAAACGGCACGTTTTGTGTGAAATTTTCTATATAAAAGTTGCTCTAGAATATCAGATTAATCTACTTTTCAAGTTTGTAATAACTTAAAACTCAATTAATCATACGTTAATACCACATCGTTTTGTGTAAAACACATAATATTAATCTTTTATCTTTATGGTCATGATGACGTCTTTTTAATCTACCATGCATGGACGTGCCTAAAGATTTAAAAGTGTTAACGAAGTCACCAACAACTATCTTGATCTACAAAAGCTCCTAACCAAAATGGCTTTTAGAGATTAAACCAGATAGTGGAGCTAATGTAGAGATCAAATCAAACGCAAGGCCAATTTAGATCAATATACGGGTAAACGCCTGTTTTGTGGGCGAATTAGAAGGTTTATAGGACAAACATACAAATTAATTGTATCGCACTTTCGTGTTGAATATGAACAATTTACGACTAATTCAATAAAGATGGACGAAAAGATAAAATAGAAAACATGACTAAAATGTAAAGGCGAAAGAACGATTCGATTGATTGAGGGGTCTCGGGTCAGAATCAAATCAACCATGGCTCTTATAAAGAGGTTAGTCTTACCTCCAGAGTGATTTCTCCTTATTAATTAAGACTCAGAAAATATAATACCATAGCAAGAAAAACTCACAAAATGCCTTAATGGACTTGACACGTGCTGCCGGTTCGACCGCTAGGACAAAGGTGACCCAACCACAGTCTACCTCCTGGTCAGACTGATCAAATAATAGCGGTCCGAACAACCTTCATTGGAAGGCTCTGTTTTGTTCTAAATCTGCGCTAGGTACTACCAAATTTGGTTGTTAACACTATTTTTTTTATCACGCATAAAATTTAATAATTCCCCCCTCTAAATAAATTAATAATATATAAATTTGGAATTACACCCATAAGTAAATATAAATGAGTACCTTGGACTCTTATTTTACAATCATATTCATTTAATTCCAAATAACACCTAACAAATTGTAATTATGTATGAACTCTATTTCTACCAAAGGAGCTATAGTTAATACTCAAATATAACCAACATATATATACTATATAATTAGATTTTTAATACCCAAAATATGAGCAGTAGTGACTCATACGGGAAAACACTGGTACTATGATGGTAGAGTCGTGAATGCATGACTCGACCAATCATGATGTAGTTTTCTGTTGCATACGAATATTACACACACGTGAGTATGCATTCAGTACAAATTTAATGGGTCAGTGACTTGCAGCTAGTCTCCATCACTCTCATGGATGTGTCAGGGTAATGCACATACATACTCGTGTACATACATACTTGTGTATGTATGCTCATGTCCCTCATATAATAAAAAAACAATATAATATGTCGTACTAGTTAGCAACTACTTCTGTCCAAAAAGAATCAAATCGTGGAGATGAATATGGAAATGACAAGATTTTTTATGAGACCGAGTTACCATTGCCCTTTTTAGAGTTCAGCCAGCTTCCTTTAGTATGTGGCTGGGGCAAGCTCACCAGCACTGCAGGGAATGTTATGACTCTATCAACGACAGTTCCAGCTCGGCACCAAGCCGATGTTTCTAACCGATCGCACCGAGGACCGGAGGGCTGTCACCACCCACAAATCTCCTCCAGCAGGGCTACTACTCAGGGCTATACTACTGCTGGGAGAAGCTACTGCTCCAACCGGTTGTCCTCCAGACCTCAACTCAATCGTTCAAGGTATGTTATCATTGACAATATCGGTGACCAGTGGAGCGACATCCTTGAATCACCAGAAGGCTGCCGCAACTTCAAGTATCCAACCCTATGTACTAAATCACCTAGCTTGGCCGCTGGCCCCATTGCTAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033935