BGIOSGA033962

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Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033962| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033962, complete gene.| tag = OsI_361...")
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Gene Name

BGIOSGA033962

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033962, complete gene.

LocusTag

OsI_36174

Ensembl Transcript ID

BGIOSGA033962-TA

Ensembl Protein ID

BGIOSGA033962-PA

Length

4130

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14219796..14223925

Sequence Coding Region

14223563..14223925,14221770..14222582,14219796..14221676

Genome Context

<gbrowseImage1> name=IndicaChromosome11:14219796..14223925 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:14219796..14223925 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGACTGTTCGCATCGTCGGCGGTGAAATGGGCCATCGACAACCTCTCCTCCCTGCTGCCGGCGGCGGCGGCGGCGGGGTCGAGCCAGGGCCTGGACGCGCTGGAGGAGCTCCGGATGCTGGAGCGGACCATGCGCCGGATCCACGCCACGCTGCGCGACGCGGAGCAGCGGTGGAACATCCGCGAGGAGTCCGCCAAGCTGCGGCTGGAGGAGCTCAAGGAGCTCGCCTACGACGCCGAGGACGTGGTGGAGGAGTACGAGTACGAGGTGAACCGGCGCAAGGTGGAGGCGCTCGAGCGCCTCGCCGCCGTTCATGGCGGCGGCGGCGGCGGCGCCAGCAAGCGCAAGCGTGAGGAGGTACATGAAGAGCACTTCACTGAGTCTGGAATAGTTCCAGTTCCGAGTGAGTTGGCTGACAGAACAAGGACAGTTATTCAGAGATTCTGTGAGATCAAAGACTACTGCGATAGTTTTAGTTTGTCTGATAATGATGGGGACAGAAGGATTGTCCCTGATATCAATGCTATCCGGCAGACTAGCTCTTTTGTATTTGCACCCAGAATTCTTGGAAGAGAGAAAGACATGGAGAATGTTATCGCAAAATTGCTCTCTGGGGAAGGCAGCCGTGTTGGAGGTTGCATGTCTGTTTTGGCCATTGTTGGTATGGGAGGATTGGGTAAAACAACACTGGCACAGCTTCTGTACAATGACCCAACAGTGCAGCAATCTTTCGATCTTTACGGATGGGTTTATGTCTCGGAGTGTTTTGATGTTAACAACATAACACGCAAGATCATCAGTTCGCTAACACAGAATAATTGTGATCATATACAATCTGGAGAGCTGCAGGGGGCATTGGCGAACCAGATAAAGGACAAGAGGATTTTCCTTGTCTTGGATGACATATGGAATGAGCGAAGCGACTACTGGGAGTTGTTGATCACACCGATGTTTGCTTCTAGGTGTTGCGATATTATAGTAACCACTCGAAATGAGAGAGTGGCAAGGTTGGTGCAAACAACGCAAATCTACAATCTAAACAGCTTAAGTCCTGATGAGAGTTGGTCATTGTTCAAGCAAACAACATTTATTGAGCAAGAAAATATCAGTCCAGCAAACCTGGTAGAGATTGCTAGGATGGTATCTGAAAAATGCAAGGGGTTACCATTGACGCAGAACGAGGTTTTGCCAGTGTTGGAGTTGAGCTACAAGCACATGCCGATATACCTGAAACAGTGCTTTGTTGCCCTTTCTCTATATCCAAAATATTATTATCTTGATGAAAACATGGTGATTTGGTTGTGGAAACTACTTGGTTTACTTCAAAGCGATGAAATTTATAACAGGGATGAAATTGGAAAGTTATATTTCAATGAATTGGTTCAGCGATCATTGCTTCAAAGTTCTATCCATGGACAGAAGGTCATGCATGATCTTGTCCATGATCTTGCATGCTTTCTTGCAGGGGAAGAGTTCTTTAGACTTGAGGAAGATAAACAAACTGAAGTTCCACGGGGCGCTCGATACATGTCCATAATGCCAAAACCACTATCTAAGAAGAGAATTCAAATATCAAATTCCTCACAATCTCTCAGAGCCATCATAGTGATAATGGGTGATATTGATATCGTAAATCCGGAAGTGTTGTTTATGCACTGTAAGAAGCTTCGGATCATTTACGTCGTACAGGGCAGTGTTCAAAAGGCACTACTTGACTTCATAGGTGGCATGAAACTACTACGCCATCTCACTCTATCAGGGTATGAATGTGCTGCACATTTATCACGTCCTAATTCTATGTCCCAGCTATTTAACTTGAAAACCCTGAACATGCAAGCGTATACGTTACTTAAAATTGGACGCCTGGTTAACTTGCAAACTTTGCCTGAAATACATCTCATGAAATGCGGTTGCTTCGTTGACATAAGAGAGTTGAGGAATATGAACAAAATAAGGAAGTTGTGTATTCATGGACTGCGTAATGTACCTAGTATCATACATGCAGATGAAGCTCATTTACAAAGTAAAAGGAACCTTGAGGTACTAGAGTTAGATTTTGACGAATTCTTTCTTCATAAAGATTTCGTCGAATTGAGAAGTTGTGAACATACAGAGCATCGTGACGCTAATGAAGCTGCTGTTACTCTATCCCGAGGCCAATTACTTGAGAAACTACGACCACACTGTCAAAGCCTCAAGGTACTGAGAATACAAAACTTGAACCATGGAAACTACCCCAGCTGGTTGGGCAGTGCTTCCTTTTCCAAGTTAACTGAACTGAAGTTACAGGCTTGTCAATCACAACACCTTCCAACACTTGGTGAGCTGCCTTCTCTCAAATCCCTTGATATACGCCAAATGGTGCGTGTGGAACACATTGGCCATGAGTTTTGCAGCCTTGATCGAAGATTCAAAGGGTTCCCTGCATTACGAGACTTGAGTTTTCATGGTATGAATCGATTGTCAGAGTGGTCTGGAGTGGAGGATGGTGAGTTTCCATGGTTGGAAGCCCTGTTGTTCTGGGATGCCTTTGAATTGAGGTCTCTACCATTGGTGCCCTTCTTGTCCTTGCGCGAGTTTACCCTAATTGATTGCAGAAATCTTGTTACTTTTCCTGCCTCAGCTACCCTGCAGGAACTAAACATATCGATTTGTGAGAAACTGAAGGAATTGCCATCCCTCCCATCACTCCAGTCATTGCATCTGTTTAATTGTCCAAGCTTGGTTGCATTTGGTCACTTTCCCTCGCTCACCATCTTATATCTAGCTGATCCATTCAAAGAAGAGATACTTCACAGGTTGGTGAATTCACACTTGAGGATGGAAGAACTAACAATTTCGTCCAACACCTTGAAGTCAATATGTCTTGAGCCACGGAGCTTGCCTGCACTTAGATCGCTAGAGCTAAGATGTCCTAATTTACAGTGCTGTGACACACTTGCCAGCATCAATTCCCTCAAGAAACTAAACATAAGTGCTTCTCCACGACTTCATGTACCTAATTCGCTTCGAAGCCAGCTGGAAGAGCTGTATACTGCTGAATCGTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAGLFASSAVKWAIDNLSSLLPAAAAAGSSQGLDALEELRMLERTMRRIHATLRDAEQRWNIREESAKLRLEELKELAYDAEDVVEEYEYEVNRRKVEALERLAAVHGGGGGGASKRKREEVHEEHFTESGIVPVPSELADRTRTVIQRFCEIKDYCDSFSLSDNDGDRRIVPDINAIRQTSSFVFAPRILGREKDMENVIAKLLSGEGSRVGGCMSVLAIVGMGGLGKTTLAQLLYNDPTVQQSFDLYGWVYVSECFDVNNITRKIISSLTQNNCDHIQSGELQGALANQIKDKRIFLVLDDIWNERSDYWELLITPMFASRCCDIIVTTRNERVARLVQTTQIYNLNSLSPDESWSLFKQTTFIEQENISPANLVEIARMVSEKCKGLPLTQNEVLPVLELSYKHMPIYLKQCFVALSLYPKYYYLDENMVIWLWKLLGLLQSDEIYNRDEIGKLYFNELVQRSLLQSSIHGQKVMHDLVHDLACFLAGEEFFRLEEDKQTEVPRGARYMSIMPKPLSKKRIQISNSSQSLRAIIVIMGDIDIVNPEVLFMHCKKLRIIYVVQGSVQKALLDFIGGMKLLRHLTLSGYECAAHLSRPNSMSQLFNLKTLNMQAYTLLKIGRLVNLQTLPEIHLMKCGCFVDIRELRNMNKIRKLCIHGLRNVPSIIHADEAHLQSKRNLEVLELDFDEFFLHKDFVELRSCEHTEHRDANEAAVTLSRGQLLEKLRPHCQSLKVLRIQNLNHGNYPSWLGSASFSKLTELKLQACQSQHLPTLGELPSLKSLDIRQMVRVEHIGHEFCSLDRRFKGFPALRDLSFHGMNRLSEWSGVEDGEFPWLEALLFWDAFELRSLPLVPFLSLREFTLIDCRNLVTFPASATLQELNISICEKLKELPSLPSLQSLHLFNCPSLVAFGHFPSLTILYLADPFKEEILHRLVNSHLRMEELTISSNTLKSICLEPRSLPALRSLELRCPNLQCCDTLASINSLKKLNISASPRLHVPNSLRSQLEELYTAESF</aaseq>

Gene Sequence

<dnaseqindica>1..363#1344..2156#2250..4130#ATGGCCGGACTGTTCGCATCGTCGGCGGTGAAATGGGCCATCGACAACCTCTCCTCCCTGCTGCCGGCGGCGGCGGCGGCGGGGTCGAGCCAGGGCCTGGACGCGCTGGAGGAGCTCCGGATGCTGGAGCGGACCATGCGCCGGATCCACGCCACGCTGCGCGACGCGGAGCAGCGGTGGAACATCCGCGAGGAGTCCGCCAAGCTGCGGCTGGAGGAGCTCAAGGAGCTCGCCTACGACGCCGAGGACGTGGTGGAGGAGTACGAGTACGAGGTGAACCGGCGCAAGGTGGAGGCGCTCGAGCGCCTCGCCGCCGTTCATGGCGGCGGCGGCGGCGGCGCCAGCAAGCGCAAGCGTGAGGAGGTAAATAAATAAATAAATTAATTAATTAGTTCGGTCGCTGCATCTGCTGACGAACTCTATTAGACTATCATTAGTGGGGTAGTAGCACTGTTGTCAGAGAAAAATAGTATTGTTGTTGGAGAAAATATTAATGGTTTACAGTTTTAATATGGTTAATTACAGTATAAAATTATAAAATCTACAAGTCAATTATATGGGTACGGGTATCCAATGGGTACCAGCTACCCACACGGGTATGGGTATGGGAACGATTTTGTACCCGCGACGGGTGTGGGTGTTTAAGTGGGAACATTTAACCATCACGGGTGTGGGTATAGGGCAAGGGAACCCGATGGGTATGCACCCGTTGCCATCTCTAGTAGCACGTTGTCTGTGCTGTGATTAGTCATAGTATTTTATACTGATTACTAGTTTTAGCTATACTTTGCAAGTCCCATTCAGGTCTCAAGTGTCTGAACCCTGAACAAACCCCCTCAAGAGGGGATAAAAGCAAACAGAAAACTGTAACCCCCTCTTCCATATTTTTTTTCCCTTTAGAAAGCTACAAGACAAGCACTATATTAGTATATTACTGCATTAGCTGGTTCAGTACTTTGTCCTAGCTGAATCAAAACCATCAAATGGAGTTTTCTAGTTTGGTAGTATATCGATTCCTAATGAAGTTAGCTCGAATCCTAAACAAATGTGTCTATAGGTAGAGACATGGAAAGAATAGTGAACTGTCTTCACGGCTGCACCCAGGATTCTGGGATTCGGGCCAAAAGGTCCGAATTTCGTCCATTTCGGTGAGGTCCGAGACACAATTTCACTCCCATTTCGTCTGAATTTGGTTAAAATTGTCAAATTTGATGTTTTGTCCGAAATTTCTGAAATTCGTCCAATTCGGTGGAGCACAATTTATATTTGCAATCGGATCCCAAAACCCTGTCTGCACCATAGATGACTGAACCTCCCTCTTTCATTTCTTTTTCAAAAAAAAGGTACATGAAGAGCACTTCACTGAGTCTGGAATAGTTCCAGTTCCGAGTGAGTTGGCTGACAGAACAAGGACAGTTATTCAGAGATTCTGTGAGATCAAAGACTACTGCGATAGTTTTAGTTTGTCTGATAATGATGGGGACAGAAGGATTGTCCCTGATATCAATGCTATCCGGCAGACTAGCTCTTTTGTATTTGCACCCAGAATTCTTGGAAGAGAGAAAGACATGGAGAATGTTATCGCAAAATTGCTCTCTGGGGAAGGCAGCCGTGTTGGAGGTTGCATGTCTGTTTTGGCCATTGTTGGTATGGGAGGATTGGGTAAAACAACACTGGCACAGCTTCTGTACAATGACCCAACAGTGCAGCAATCTTTCGATCTTTACGGATGGGTTTATGTCTCGGAGTGTTTTGATGTTAACAACATAACACGCAAGATCATCAGTTCGCTAACACAGAATAATTGTGATCATATACAATCTGGAGAGCTGCAGGGGGCATTGGCGAACCAGATAAAGGACAAGAGGATTTTCCTTGTCTTGGATGACATATGGAATGAGCGAAGCGACTACTGGGAGTTGTTGATCACACCGATGTTTGCTTCTAGGTGTTGCGATATTATAGTAACCACTCGAAATGAGAGAGTGGCAAGGTTGGTGCAAACAACGCAAATCTACAATCTAAACAGCTTAAGTCCTGATGAGAGTTGGTCATTGTTCAAGCAAACAACATTTATTGAGCAAGAAAATATCAGTCCAGCAAACCTGGTAGAGATTGCTAGGATGGTATCTGAAAAATGCAAGGGGTTACCATTGGTAATCAAGACTGTGGGGAGCATATTGTGATTTGAAACCGATGAAATTAAATGGAGGGATGTCTTACAAAGTGAGTTATGGGACTTGGAGCAGACGCAGAACGAGGTTTTGCCAGTGTTGGAGTTGAGCTACAAGCACATGCCGATATACCTGAAACAGTGCTTTGTTGCCCTTTCTCTATATCCAAAATATTATTATCTTGATGAAAACATGGTGATTTGGTTGTGGAAACTACTTGGTTTACTTCAAAGCGATGAAATTTATAACAGGGATGAAATTGGAAAGTTATATTTCAATGAATTGGTTCAGCGATCATTGCTTCAAAGTTCTATCCATGGACAGAAGGTCATGCATGATCTTGTCCATGATCTTGCATGCTTTCTTGCAGGGGAAGAGTTCTTTAGACTTGAGGAAGATAAACAAACTGAAGTTCCACGGGGCGCTCGATACATGTCCATAATGCCAAAACCACTATCTAAGAAGAGAATTCAAATATCAAATTCCTCACAATCTCTCAGAGCCATCATAGTGATAATGGGTGATATTGATATCGTAAATCCGGAAGTGTTGTTTATGCACTGTAAGAAGCTTCGGATCATTTACGTCGTACAGGGCAGTGTTCAAAAGGCACTACTTGACTTCATAGGTGGCATGAAACTACTACGCCATCTCACTCTATCAGGGTATGAATGTGCTGCACATTTATCACGTCCTAATTCTATGTCCCAGCTATTTAACTTGAAAACCCTGAACATGCAAGCGTATACGTTACTTAAAATTGGACGCCTGGTTAACTTGCAAACTTTGCCTGAAATACATCTCATGAAATGCGGTTGCTTCGTTGACATAAGAGAGTTGAGGAATATGAACAAAATAAGGAAGTTGTGTATTCATGGACTGCGTAATGTACCTAGTATCATACATGCAGATGAAGCTCATTTACAAAGTAAAAGGAACCTTGAGGTACTAGAGTTAGATTTTGACGAATTCTTTCTTCATAAAGATTTCGTCGAATTGAGAAGTTGTGAACATACAGAGCATCGTGACGCTAATGAAGCTGCTGTTACTCTATCCCGAGGCCAATTACTTGAGAAACTACGACCACACTGTCAAAGCCTCAAGGTACTGAGAATACAAAACTTGAACCATGGAAACTACCCCAGCTGGTTGGGCAGTGCTTCCTTTTCCAAGTTAACTGAACTGAAGTTACAGGCTTGTCAATCACAACACCTTCCAACACTTGGTGAGCTGCCTTCTCTCAAATCCCTTGATATACGCCAAATGGTGCGTGTGGAACACATTGGCCATGAGTTTTGCAGCCTTGATCGAAGATTCAAAGGGTTCCCTGCATTACGAGACTTGAGTTTTCATGGTATGAATCGATTGTCAGAGTGGTCTGGAGTGGAGGATGGTGAGTTTCCATGGTTGGAAGCCCTGTTGTTCTGGGATGCCTTTGAATTGAGGTCTCTACCATTGGTGCCCTTCTTGTCCTTGCGCGAGTTTACCCTAATTGATTGCAGAAATCTTGTTACTTTTCCTGCCTCAGCTACCCTGCAGGAACTAAACATATCGATTTGTGAGAAACTGAAGGAATTGCCATCCCTCCCATCACTCCAGTCATTGCATCTGTTTAATTGTCCAAGCTTGGTTGCATTTGGTCACTTTCCCTCGCTCACCATCTTATATCTAGCTGATCCATTCAAAGAAGAGATACTTCACAGGTTGGTGAATTCACACTTGAGGATGGAAGAACTAACAATTTCGTCCAACACCTTGAAGTCAATATGTCTTGAGCCACGGAGCTTGCCTGCACTTAGATCGCTAGAGCTAAGATGTCCTAATTTACAGTGCTGTGACACACTTGCCAGCATCAATTCCCTCAAGAAACTAAACATAAGTGCTTCTCCACGACTTCATGTACCTAATTCGCTTCGAAGCCAGCTGGAAGAGCTGTATACTGCTGAATCGTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033962