BGIOSGA033968

From RiceWiki
Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033968| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033968, complete gene.| tag = OsI_361...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033968

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033968, complete gene.

LocusTag

OsI_36162

Ensembl Transcript ID

BGIOSGA033968-TA

Ensembl Protein ID

BGIOSGA033968-PA

Length

4748

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14104616..14109363

Sequence Coding Region

14108998..14109363,14105750..14107191,14104616..14105588

Genome Context

<gbrowseImage1> name=IndicaChromosome11:14104616..14109363 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:14104616..14109363 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGGCTGTTTGCGTCCATCGCTGCGAAATGGACGCTCGACAAGCTCTCATCCTTGCTAGCGCTGGAGGGGCCAATGCCCGTGGCTTTCTCCTCGTCCTCCTCCCACAGCCACGGCCTGGAGGACCTGTGGATGCTGGAGAGGACCATGCGCAGGATCCATGCCACGCTTGTGGATGCCGAGGAGCACTGGAACATTCGCGAGGAATCCTCTAAGCTCTGGCTCAGTGAGCTCAAGGAGCTGGCCTACGGTGCACAGGACGTGGTGGATGAATATGAGTACGAGGTGAACCTGCGGAGGCTGGAGGCACGACCAGAGAGGCCCGAAGGTGCTAGCAACAGCAGCAAGCGTAAGCGCCATCAGGTCAATGGTGCGCACTTTGCTGAAGCCGGATTAATCGCAGTCACAAATCAGCTGGCTGTCAGGGCAAAAAAACTTGTACAAAGATTCGAGGAGATGAAGGTCTACTATAAACATTTTAGCCTATCTCATAATGATGGGGAACACCGGATTATGCCTTCTATCCAAAGCGTGCGTGACAGTAGCTATTTTGTGGTTGAACAAAGCATTATTGGAAGGGAGTCAGACAAGGAGACAGTAATAGAAATGCTGATGTCTGTACACAGTAGCAATGTTCCAAGTCACTTTACTGTCTTGGCAATTGTTGGTATGGGAGGCTTGGGCAAAACAACTCTAGCACAGCTCGTGTACAATGACCCAACAGTATGCCAATCATTTGATCTCTATGCATGGGTTTTTGTGTCTGATCATTTTGACTCAACGAGATTGACAAAGAAAATTGTTGTTTCTATAACGAAGGACAGCAATACATTGACAGAATTGGTTGATCTTCAGGAAAAGTTAGCCGACGAGATACGAGGGAAGAGATGTTTACTTGTTTTGGATGATGTCTGGAACGAAAGAAGGGATTGCTGGGAAACCTTTTGTAAGCCATTGTTGGTTGCCAAACAATGTAAAATTTTAGTAACAACACGCAATGTGGCAGTAGCTAGATTGGTGCAGACAATGCCACACTTCACCATGGACCACTTAAGCAACCTTAAGAGCTGGGAATTGTTTGAAAGAACAATTACAGTGCAGAACAATGTCATTCCAGAAAATCTTGTAGACATTGGCAAGAAGATTGTTAGAAAATGTGACAGATTACCACTGGCCATCAAAACTCTTGGTAGCATGTTAAGATATGAGACCGATGAAAGGAGATGGATAGATGTCCTTGAAAGTGATCTATGGGATTTGGATAAAGCACAGAATGAGGTTTTACCAGCTTTGGAGTTGAGCTACAAGAATATGCCCATGCACTTAAAACGATGCTTTGTTGCCCTTTGTCTGTTCCCAAAAGATTACACACTTAATAAATTTGATGTTGTCGGGCTGTGGAAATTGCTCGATATAATTCATGGTGATGAAAGAAGGAATCAGGACGAAACTGGGAGTCGATATTTTGATGAACTAGTTCAGAGGTCGTTTCTTCAATTATTTCAGGGTTGTGGCATCATGCATGATCTAATCCATGATCTGGCATGCCATCTTTCTGGAGATGAGTTCTTTATACTTGAAGGCAACGAAGGCAACAGACCAGTTCAAATTCCACAAAATACTCGGTTTATGTCCATACTTGAATGCAGTACATCTGTTCAGTTCTCAGTTGCCTCTCCCACCCTCTGTGGGCCATCATTGTATTGGCCCGGGAAGGATATTGCAAAGTTAGAAATCCAGAACTACTATTTACACACTGCAAAAATTTACGGGTCCTTAGCTTGCCTTGCAGCAACATTACTGAGTTTTAACTTAAGAGAGCTGAGGAACCTGAACAAATTAAAGGAGCTTCATATAAGCGGTTTGGGTGATTTATCTCATATTGAAGATGCAAACGAAGTTCAACTAATGAGTAAAACGCACCTCCAGTTATTAGCATTGGATTTTTCTTGTGATGAATGGGAGTGCCGAGAAGAGAAGTGCAGGAGCATGCTACAACAAAACATAAAAGTATCCCATGAGCGATTGGAACTGGATTTTACATATGAAGAAATGTGGCATGAAAAATTTCATCAGTTCCAAAACATGCTGACACCTGAAGGTTTTACATCACCACATAAAGATCTACTTGAGAGCTTGAGACCTCATACAGGCCTTAGAAAACTGATAATAGAAAATTATGATTGTCAGAGCTACCCTAGTTGGCTTGGCAATGCTTCATTTTCAGTGTTTACTGAAATAGAGTTATCTGGTAGTGGCTGCGAGAGACAACATGTTCCAACACTTGGTGAGCTACCTTTGCTCAAGTCCCTCAAGATTGGGAGCATGTCTTTCGTTGAACACATTGGCAGAGAGTTTTGCAGCTATGTTTCTGGAATCAAAGCCTACCCATCATTGACAAGCTTGGAAATGTTTCTTATGCCAAGGTGTTCCGAATGGTCTGGTGTGGAGGATGGAGATTTCGCTTGCCTGAAAACATTGTCAGTCAAATGGTGCTTTAAACTGAGTTATCTTCCGTTGGAACGATTCCCTTCTTTGGAAACAGTGACCTTGCACGATTGTGATGGCATTAATACTATCCCTGCAGGACGGACATTTAAGAAGCTATGCATTGAAGAGTGCAGAGGTCTAAATACAGTCCCTACCCAACCCTCACTACTGGTGCTAGAGCTAAAGAATTGCCCAAAACTGAGTACGGTTGGTTTCATGCCTGGACTCAACACATTGGAGATAATGAAATGTCCAAACCTGAATAAGTGGATTCGATGCCTGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAGLFASIAAKWTLDKLSSLLALEGPMPVAFSSSSSHSHGLEDLWMLERTMRRIHATLVDAEEHWNIREESSKLWLSELKELAYGAQDVVDEYEYEVNLRRLEARPERPEGASNSSKRKRHQVNGAHFAEAGLIAVTNQLAVRAKKLVQRFEEMKVYYKHFSLSHNDGEHRIMPSIQSVRDSSYFVVEQSIIGRESDKETVIEMLMSVHSSNVPSHFTVLAIVGMGGLGKTTLAQLVYNDPTVCQSFDLYAWVFVSDHFDSTRLTKKIVVSITKDSNTLTELVDLQEKLADEIRGKRCLLVLDDVWNERRDCWETFCKPLLVAKQCKILVTTRNVAVARLVQTMPHFTMDHLSNLKSWELFERTITVQNNVIPENLVDIGKKIVRKCDRLPLAIKTLGSMLRYETDERRWIDVLESDLWDLDKAQNEVLPALELSYKNMPMHLKRCFVALCLFPKDYTLNKFDVVGLWKLLDIIHGDERRNQDETGSRYFDELVQRSFLQLFQGCGIMHDLIHDLACHLSGDEFFILEGNEGNRPVQIPQNTRFMSILECSTSVQFSVASPTLCGPSLYWPGKDIAKLEIQNYYLHTAKIYGSLACLAATLLSFNLRELRNLNKLKELHISGLGDLSHIEDANEVQLMSKTHLQLLALDFSCDEWECREEKCRSMLQQNIKVSHERLELDFTYEEMWHEKFHQFQNMLTPEGFTSPHKDLLESLRPHTGLRKLIIENYDCQSYPSWLGNASFSVFTEIELSGSGCERQHVPTLGELPLLKSLKIGSMSFVEHIGREFCSYVSGIKAYPSLTSLEMFLMPRCSEWSGVEDGDFACLKTLSVKWCFKLSYLPLERFPSLETVTLHDCDGINTIPAGRTFKKLCIEECRGLNTVPTQPSLLVLELKNCPKLSTVGFMPGLNTLEIMKCPNLNKWIRCLN</aaseq>

Gene Sequence

<dnaseqindica>1..366#2173..3614#3776..4748#ATGGCCGGGCTGTTTGCGTCCATCGCTGCGAAATGGACGCTCGACAAGCTCTCATCCTTGCTAGCGCTGGAGGGGCCAATGCCCGTGGCTTTCTCCTCGTCCTCCTCCCACAGCCACGGCCTGGAGGACCTGTGGATGCTGGAGAGGACCATGCGCAGGATCCATGCCACGCTTGTGGATGCCGAGGAGCACTGGAACATTCGCGAGGAATCCTCTAAGCTCTGGCTCAGTGAGCTCAAGGAGCTGGCCTACGGTGCACAGGACGTGGTGGATGAATATGAGTACGAGGTGAACCTGCGGAGGCTGGAGGCACGACCAGAGAGGCCCGAAGGTGCTAGCAACAGCAGCAAGCGTAAGCGCCATCAGGTAAATTCACAACAAATGTCATTTCAGGTTATAAGACGACGTTTTGAATTTGGTCAAAGTCAAACTGTTTAAAGTTTGACTAAGTTTGTAGAAAAAACAATAGCATTTTCAACCCAAGACAAATTTATTATAAAAATATATTCAATTATTGATTTAATGGAGCTAAATTTATATTATAAATATTATTATATTTGTTTATAAACTTAGTCATACTTGAAGTAGTTTGACTTTGATCAAAGTCAAAAGTCTTATAGCTTGAAATAGAGGGAGTAACACGGATCGCGCCGGACGCTGCCGACACAAAGAGGTAGGGAAAAGACAAATCTGAGAGGGGTTTGGTTTGCGGAATGGGGATGAGGGGAATGCACCGGGCCGGTCATTGGCTCAGTGTTGTGCTGCAACGGACGAGCGCCTTTGCTGGTCCCTCTCTGCTCGCTGCTGTCACGCCTGAGGAGGATGCGGGAGCGCTGCGCTGCTCCTGTCATGCCGAGGGGGATTGGGGGAGTGTCTTCACTGTCGCGCCGAGGGGATTGGCGAAGTGCTGTCCCGGCGGTTCCTGAGAACGACGGGATGTATATCTTTCCATCAATGGGAATGGGATGAGATGAGACCATGAGGGGACAAGCAACTCATGTTCTTTCATATTTAGCACTTTAACCTTCTGAATATTATGAGAAGTTCCATATGTAGGATTGAATATTACTTTAGTCACCCGTTGGCTTCGCACTTCGGGATACTATTGTGGTGGTATCGCGACGTTTGGACCAGGTGGCACAGTAGTTTTTTACTCAGGAGCATGGTTGTCGATCTAGTCTACAGATTGATAGCCACTAATATTTCTATTTTGTGAGAGGGGTCTTCATAGCTCTTTCTTTGTGAGTGGCTGTGTGCATCTTATGCAGATGCCACGAGTGGGCTCAGCTTAAATGTATCATTTTGGTGTATTTGACTGAGTTTTAATAAAGCTTCCATTATCGAAAAATATGTAGGATTGAACAAGTCTAAACAAAAACTACCATATGGGGGTGAATAGTAGGGAAAACAAAAAAACACAAAATATTTTGCAGAATAAAAGGTTTACCTTGAACGTAGTAGATGACGAAGCTTTGTCATTGCCGGTCAAACCACTTCCAAGCCGCTAGTCAGACTGCCGCGATGCCTGCGGTTAGACCGTTGTATCCCCACCGGTCAGACCGCCACCTTGCTGTCGGTCAGATCGTCGAGACACAGAAAACACCAGTAAATGACAAACTCCAAGTTGTAGATTAAATATCTCGACTTTATTACATCAACTAGTGTTTACAAAGTACACTAACAAAACTCCTGACCAAAATCTCGATCTAAACTCGAAACCCTAACTTTTAACTCAACTCAACTCTCTCTAAAAATGATACTGGAAGGCCACACCCACTCTCTCTCTATTTATACACAAGGTAGGCTATGCAAAGCCCGCGAATCTTACATAACTTAGGACTCCCAACCACGTGAAGCAAAATAAATGATAATGTTGGCGTTGAAAATCGTCAACATGCGGTTCGTTGAGAGGAAATTGATAAAGAAGATAACTATTGTGCTTATATCCATATGTATATATGTTAAATTTAGTTATCAACAGATGGAATAATCAACTGTTAGGATGTTGTACTTGCTCTTTCATGACAGTAGATAGAGCAATGTAAAAGATCCCTTTACCTATTAATTATTTAAGCGCAAGAAAAAAAATAGATTCTAGGTTAAGTTGTGAGAATAATTAACGAAATATGTCTAGTGTACACCGCAAAATTAAGAATCATTTTTCTCTTATAGGTCAATGGTGCGCACTTTGCTGAAGCCGGATTAATCGCAGTCACAAATCAGCTGGCTGTCAGGGCAAAAAAACTTGTACAAAGATTCGAGGAGATGAAGGTCTACTATAAACATTTTAGCCTATCTCATAATGATGGGGAACACCGGATTATGCCTTCTATCCAAAGCGTGCGTGACAGTAGCTATTTTGTGGTTGAACAAAGCATTATTGGAAGGGAGTCAGACAAGGAGACAGTAATAGAAATGCTGATGTCTGTACACAGTAGCAATGTTCCAAGTCACTTTACTGTCTTGGCAATTGTTGGTATGGGAGGCTTGGGCAAAACAACTCTAGCACAGCTCGTGTACAATGACCCAACAGTATGCCAATCATTTGATCTCTATGCATGGGTTTTTGTGTCTGATCATTTTGACTCAACGAGATTGACAAAGAAAATTGTTGTTTCTATAACGAAGGACAGCAATACATTGACAGAATTGGTTGATCTTCAGGAAAAGTTAGCCGACGAGATACGAGGGAAGAGATGTTTACTTGTTTTGGATGATGTCTGGAACGAAAGAAGGGATTGCTGGGAAACCTTTTGTAAGCCATTGTTGGTTGCCAAACAATGTAAAATTTTAGTAACAACACGCAATGTGGCAGTAGCTAGATTGGTGCAGACAATGCCACACTTCACCATGGACCACTTAAGCAACCTTAAGAGCTGGGAATTGTTTGAAAGAACAATTACAGTGCAGAACAATGTCATTCCAGAAAATCTTGTAGACATTGGCAAGAAGATTGTTAGAAAATGTGACAGATTACCACTGGCCATCAAAACTCTTGGTAGCATGTTAAGATATGAGACCGATGAAAGGAGATGGATAGATGTCCTTGAAAGTGATCTATGGGATTTGGATAAAGCACAGAATGAGGTTTTACCAGCTTTGGAGTTGAGCTACAAGAATATGCCCATGCACTTAAAACGATGCTTTGTTGCCCTTTGTCTGTTCCCAAAAGATTACACACTTAATAAATTTGATGTTGTCGGGCTGTGGAAATTGCTCGATATAATTCATGGTGATGAAAGAAGGAATCAGGACGAAACTGGGAGTCGATATTTTGATGAACTAGTTCAGAGGTCGTTTCTTCAATTATTTCAGGGTTGTGGCATCATGCATGATCTAATCCATGATCTGGCATGCCATCTTTCTGGAGATGAGTTCTTTATACTTGAAGGCAACGAAGGCAACAGACCAGTTCAAATTCCACAAAATACTCGGTTTATGTCCATACTTGAATGCAGTACATCTGTTCAGTTCTCAGTTGCCTCTCCCACCCTCTGTGGGCCATCATTGTATTGGCCCGGGAAGGATATTGCAAAGTTAGAAATCCAGAACTACTATTTACACACTGCAAAAATTTACGGGTCCTTAGCTTGCCTTGCAGCAACATTACTGAGGTATTACCAAGGTACATCAGTACCCTAAAACTACTTCGTTATTTAGAGCTTACAGTGGATATGGACTATCTTGAAGAGCAAGAGAATCCACCAGGTGGAATAGACCTCCTAATTAACCTATGCACTTTACCTAACATATTTATCAGGTCTTGTGGTTGTAGTTTTAACTTAAGAGAGCTGAGGAACCTGAACAAATTAAAGGAGCTTCATATAAGCGGTTTGGGTGATTTATCTCATATTGAAGATGCAAACGAAGTTCAACTAATGAGTAAAACGCACCTCCAGTTATTAGCATTGGATTTTTCTTGTGATGAATGGGAGTGCCGAGAAGAGAAGTGCAGGAGCATGCTACAACAAAACATAAAAGTATCCCATGAGCGATTGGAACTGGATTTTACATATGAAGAAATGTGGCATGAAAAATTTCATCAGTTCCAAAACATGCTGACACCTGAAGGTTTTACATCACCACATAAAGATCTACTTGAGAGCTTGAGACCTCATACAGGCCTTAGAAAACTGATAATAGAAAATTATGATTGTCAGAGCTACCCTAGTTGGCTTGGCAATGCTTCATTTTCAGTGTTTACTGAAATAGAGTTATCTGGTAGTGGCTGCGAGAGACAACATGTTCCAACACTTGGTGAGCTACCTTTGCTCAAGTCCCTCAAGATTGGGAGCATGTCTTTCGTTGAACACATTGGCAGAGAGTTTTGCAGCTATGTTTCTGGAATCAAAGCCTACCCATCATTGACAAGCTTGGAAATGTTTCTTATGCCAAGGTGTTCCGAATGGTCTGGTGTGGAGGATGGAGATTTCGCTTGCCTGAAAACATTGTCAGTCAAATGGTGCTTTAAACTGAGTTATCTTCCGTTGGAACGATTCCCTTCTTTGGAAACAGTGACCTTGCACGATTGTGATGGCATTAATACTATCCCTGCAGGACGGACATTTAAGAAGCTATGCATTGAAGAGTGCAGAGGTCTAAATACAGTCCCTACCCAACCCTCACTACTGGTGCTAGAGCTAAAGAATTGCCCAAAACTGAGTACGGTTGGTTTCATGCCTGGACTCAACACATTGGAGATAATGAAATGTCCAAACCTGAATAAGTGGATTCGATGCCTGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033968