BGIOSGA033979

From RiceWiki
Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033979| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033979, complete gene.| tag = OsI_361...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033979

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033979, complete gene.

LocusTag

OsI_36136

Ensembl Transcript ID

BGIOSGA033979-TA

Ensembl Protein ID

BGIOSGA033979-PA

Length

3547

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:13768569..13772115

Sequence Coding Region

13771854..13772115,13771323..13771720,13771183..13771260,13770759..13770846,13769819..13769886
,13768569..13768760

Genome Context

<gbrowseImage1> name=IndicaChromosome11:13768569..13772115 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:13768569..13772115 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAACGGTGGTGGAAACCCTAGGGGCGGCGGCGGCGGAGGCCCTAGGGGCTTCGGCGGCGGAGGCCCTAGGGGCTTCGGCGGCGGAGGCCCTAGGGGCTTCGGTGGAGGAGGCCCTAGGGGCTTTGGCGGCAGCAAGCCTAGGAGGGGCAATGGAGAGCTGGGTTGTGGCCGCGGCGATGACAGCGATCTATGGTTGGGTTATGGTGGCGGCGGCAGCGATGATGGTGGCGGAGGGTTGGGTTCTGGGGTTTCTGGCGGCAAGAATTTTGTTTTGGATACACAAGATGGGTCCGATGATGACCAGTTCGAGTTCATCCCTGATTCCGATGATGAAGCCGAGGACCATCAGTTCTCCTTGGACCAGGAGTTTGTGCCCGAGACTGAATTCCAGGATTGTAAGGAAGTGGAGGACAAGGGTGGTGAGATCTGTGATGGCAGCAGCATGGGGTACTCACATGATGGAGGGACACGAACTGCTGCCCTGAGGGGCGGATGGCGTATTCGAGGCAAGTGGTTTGAACGTAAATCCGGCTACTTATTGGAAGAAGGCAAAAATATGATCTTCGATAGCCAGGATGGGCCTGATTTGGATGAGTACGAGTTCTGGCCTGATTTGGATGATGAAGGCGGCGACTTGTACTTGATTGGTTCGATGGGGACAATGGCCAACCAAGGTGGTGGACCGAGCAAGCACATCATGGTGGAGTCCTCCAATATCAACGGGCAGAGCAAGATTTTAGTGCCTCTCATGGCTCGAGGGCATCCCACAAATATATCAAGATTTAAGATCAAGAGGCTTAGAGCTATTGCATCCCATGGATGCCAGGCTGATCCTTCTCAGGGTAGCATCATAACAGACCCGATTCTGCTACTTCGCTTGACGATGCAGGACGTGTCTAACCCATTGATGCCCAACAAGGTGGAGATACATGGCGAGGAGAAGATGCCCAACGACAAAGAAAATGGTGATGATCAGTTTGGTGGCGTGGACCAAATTGGTTATTCACAGGAGGAAGAATACGAGCCCATTGATGACACCAAGTTGGAAATACTTTGTCTACTGATCCCAGGTTACATCTAG</cdnaseq>

Protein Sequence

<aaseq>MSNGGGNPRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGSKPRRGNGELGCGRGDDSDLWLGYGGGGSDDGGGGLGSGVSGGKNFVLDTQDGSDDDQFEFIPDSDDEAEDHQFSLDQEFVPETEFQDCKEVEDKGGEICDGSSMGYSHDGGTRTAALRGGWRIRGKWFERKSGYLLEEGKNMIFDSQDGPDLDEYEFWPDLDDEGGDLYLIGSMGTMANQGGGPSKHIMVESSNINGQSKILVPLMARGHPTNISRFKIKRLRAIASHGCQADPSQGSIITDPILLLRLTMQDVSNPLMPNKVEIHGEEKMPNDKENGDDQFGGVDQIGYSQEEEYEPIDDTKLEILCLLIPGYI</aaseq>

Gene Sequence

<dnaseqindica>1..262#396..793#856..933#1270..1357#2230..2297#3356..3547#ATGTCCAACGGTGGTGGAAACCCTAGGGGCGGCGGCGGCGGAGGCCCTAGGGGCTTCGGCGGCGGAGGCCCTAGGGGCTTCGGCGGCGGAGGCCCTAGGGGCTTCGGTGGAGGAGGCCCTAGGGGCTTTGGCGGCAGCAAGCCTAGGAGGGGCAATGGAGAGCTGGGTTGTGGCCGCGGCGATGACAGCGATCTATGGTTGGGTTATGGTGGCGGCGGCAGCGATGATGGTGGCGGAGGGTTGGGTTCTGGGGTTTCTGGCGGTGGGGGAGGCTTAGGCAAGAGATTCTGGCGGTGACGACGGAGACAGGACGCGGAGTGCCTCCCAGATGTGCAGTAAGAAACGGCGTCGAGGCATGTGGTACTCGCGAAGATACAGACACTTATTGGAAGAAGGCAAGAATTTTGTTTTGGATACACAAGATGGGTCCGATGATGACCAGTTCGAGTTCATCCCTGATTCCGATGATGAAGCCGAGGACCATCAGTTCTCCTTGGACCAGGAGTTTGTGCCCGAGACTGAATTCCAGGATTGTAAGGAAGTGGAGGACAAGGGTGGTGAGATCTGTGATGGCAGCAGCATGGGGTACTCACATGATGGAGGGACACGAACTGCTGCCCTGAGGGGCGGATGGCGTATTCGAGGCAAGTGGTTTGAACGTAAATCCGGCTACTTATTGGAAGAAGGCAAAAATATGATCTTCGATAGCCAGGATGGGCCTGATTTGGATGAGTACGAGTTCTGGCCTGATTTGGATGATGAAGGCGGCGACTTGTACTTGATTGGTTCGATGGTTCAATGAAGGTGTCCACTTCGTCGAATGCTTTTTACCCACAGGGAGGTGACTTGTGGCAGGGGACAATGGCCAACCAAGGTGGTGGACCGAGCAAGCACATCATGGTGGAGTCCTCCAATATCAACGGGCAGAGCAAGGTTAGTGCTTTTAATCATTAAATTTAGACATGAAAATTGGGTTGTATTGTTTGAAAAAAATGCTAGTTTTTGAACATATTATGTCCAGTTTTCCATTTGATCACCATAGGACAGTGCACTGTATACCGTATTTAATATTGTAAGGATCATTATGTATTGATTAAAAGGGAGTGTAAGCTCTCGACAACCTTTTTGTTGTATTTCTTTCAGTTAGCAATCATTTCTTTCTATATAATTGGTAACCACTAAATTACTTATTGCTATAAAGCTACAAAATCATGAAGCTACATGTTGTAAGCAGCCATGGCAGTGCCACCACATCTATTAAAATTTTAGATTTTAGTGCCTCTCATGGCTCGAGGGCATCCCACAAATATATCAAGATTTAAGATCAAGAGGCTTAGAGCTATTGCATCCCATGGATGTGAGTTTTTCTTTGTATTTTTCTTCTCTCTAACTAGGTACAGATTTGTTGTAGTATCCAAAGAGCACATCAATGAACTCACGAACATGCCCAAAATCAGCTATCTAGGTACAGAAAAAATAAATGAAATTATATATTTATGAATCATTTTTTAGGGATTTTTTGTGGTACTATACAAGTGCCTGTAAATGTTCACCCATCTGTCAAAGTGGCAATGCATTTTTCTATGCCTATGTATTGTCCTATTATTCCTATTTTCTCTTTGCTTTTTGTCTTTAGAAAAAGGTCTATGAAGGAATATCAAAGAAATGTCTATTTGTCTTCTTTTTTTAAAAAAAACTTTACTAATTGTGCTCCGAATGTTGTTTCTACTATGATCTATATATTTGCTAACTGCTTCAGTTTCTAAGGTTTCAATAGCACATATTGTGGAACAATGAATCTTCTGAATTACTTTGCTTGGCTATGTACACTTGGGATAAACACTCATGTAGCTTATGTTTGTTGGGATACATGCTGCTTTGCTTGGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTACTGTCGCATCGACAAGTCAAACATGGCTTCCAAGCCATTCAAAGCTCTGACTACCTACGGACAGGACACGTGCTACTCGCTAATCACATTCTTAGCTCACGCCTGGAGGTCAGGCCTCCTTTTTGGGTCGCCTGAGCCAGGCTAACCACGGTGCCAGACGGCTCAGGTCAGGCAGTAGACAAATGTCTCAGGGCATCAACCAAACACATCCCAGTTCTTCTCTGGTATATCTCAGGCCAGGCTGATCCTTCTCAGGGTAGCATCATAACAGACCCGATTCTGCTACTTCGCTTGACGATGCAGGTTCCGAACACGCTTGTTCTCCTGCTGGAGATGTAATCTACTTTGTGAGCGATGAACTATTGGGCTTATTTCTTTGTACTTGTGTTTTCTGTTGCCCCGCTTATTTCTTTTGCTTTTTCGACTTTTGGCTTCTTCGGCCGTGCCATTGGGCTTTTCGGTTTGTGCGATGGGCCCGTGTATTTCGAAAACCCTCCTATGTTCGACCGTACTTGTTGTGGCAAGCACACTGTGCTAAGTGTCTGTCCGAGGTCAAGTGTAGCGATAGTTAGTAAGAGATGGGTCGCCACAATTTCCGCGTCAGACTAAGCAATGCTTCAGTTGATTCGTCGCGCCCCGCTTAATTTTTCGCTGATCAGACGTTTGTCTTAGGGGTTTTTGCAATGTATCACACTGATCAGACATAAAGTTTTATACTGGTTCGAGCCTCCATTATAGATAATTGCCCTACTCTAGTTTGTTTTTTTTCCTCTTTTTTTTCGTCGGGTGACAGAGGCTTACATCATATATATATGTATAGCGATTGGGTGCCACCCTTTCTTACATATAGTATCGCTTGAGCGAAGCAGTGTTCCGCGTGTGGTCAAGCTCTTCACCCCCATTGTTGCCAGTCAAAACCATCCTCTTGGTGACCAATGCACAATGAGGTAGGGGCCTCATATATTTCTACTATGATCTATATATTTGCTAACTGCTTCAGTTTCTAAGGTTTCAATAGCACATATTGTGGAACAATGAATCTTCTGAATTACTTTGCTTGGCTATGTACACTTGGGATAAACACTCATGTAGCTTATGTTTGTTGGGATACATGCTGCTTTGCTTGGTTCTGCAAATGCAAAAGTGTTTAACAACAAACAACAAAGTGTTTTATTTATTATGTTCTTACAATAGATTTCCATACATAATCATATCTCCTTTTGTTCTTTCATGAGCTTTAATTAGAAATGACATTCACAGACCCACCATTCAAATATGCAAGCACTGGACGTAGAGTGTACTGCTCACTACTATTTAATTGATATAACTTTTAGTTTTGATTTGTTTTCATATATGTTCAGGACGTGTCTAACCCATTGATGCCCAACAAGGTGGAGATACATGGCGAGGAGAAGATGCCCAACGACAAAGAAAATGGTGATGATCAGTTTGGTGGCGTGGACCAAATTGGTTATTCACAGGAGGAAGAATACGAGCCCATTGATGACACCAAGTTGGAAATACTTTGTCTACTGATCCCAGGTTACATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033979