BGIOSGA033996

From RiceWiki
Revision as of 08:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033996| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033996, complete gene.| tag = OS11G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033996

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033996, complete gene.

LocusTag

OS11G0481200

Ensembl Transcript ID

BGIOSGA033996-TA

Ensembl Protein ID

BGIOSGA033996-PA

Length

5244

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:13403812..13409055

Sequence Coding Region

13408888..13409055,13407310..13407391,13407150..13407226,13406962..13407050,13405831..13405954
,13405457..13405740,13404905..13405034,13403812..13404447

Genome Context

<gbrowseImage1> name=IndicaChromosome11:13403812..13409055 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:13403812..13409055 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCAGGGGCGTCCACGCCGAGGCGTTGCTGCTGCGTCGGCGGCGCGGGCCGGCGAGGCTGTGGGTCGCGGTGCTGGCGCTGCTCGCCGGCACCCTCTGGCTCTTCTCCTCCTCCTCCTCCGCTGGCCTCGGCCTCGGCCTCGCCCGCTCCTCCTACGGACTCCAGGATGTTGATGTAAATAAGTTGTGGAGAACTGCAGATTCAAATGGTTGGAGGGCATCTTCTGCACCGCGCACCTATTGGCCTCCTCCACCAATAGAGTCTGAGTCAAATGGTTACTTACGTGTCCGGTGCAATGGTGGCTTGAACCAACAACGTAGTGCGATATGTAATGCTGTTGTTGCTGCACGAATAATGAATGCTACACTAGTGCTGCCGGAGCTGGACACAAATTCTTTCTGGCATGATGAGAGTGGTTTTTTAGGTATTTATGATGTGCTCCACTTCATCAAGACATTAAAGTATGATGTTCGAATTGCTATGGTCATTCCAGAAATTACTACAAATGGAAAGACCAAGAAGCTGAAAGCCCATCAGATTCGACCGCCTCGAGATGCACCAGTTACGTGGTATACAACAGTTGCTTTGGAGAAGATGAAGAAGTATGGAGCTATATATTTAACCCCATTTTCACACCGCCTGGCAGAAGACATTGATGATCCAGAGCTCCAGAGATTGAGATGCAGGGTGAATTACCATGCACTACGATTCAAGCCTCACATAATGAAAACAAGCAGTGAGATAGTCAATAAGCTCCGTACAGAAGGCCATTTCATGTCAATTCACCTTCGATTTGAGATGGATATGCTTGCATTTGCTGGGTGCATTGATATATTCACACCTCAAGAACAGAAAATTCTGATCAAGTACCGCAAGGAACATTTTGCAGAAAAGGAACTTATTTATAGGGAAAGAAGGCTCATCGGGAAGTGCCCTTTAACTCCAGAAGAGGTAGGTCTTATTCTTCGATCCATGGGATTTGACAATAAAACAAGAATCTACCTTGCTTCTGGCGATCTCTTTGGTGGGAAACGATTCATGAAGCCATTTAAGGCTATGTTTCCACGCTTAGAAAACCACAGCACTGTTGGTCCTGGAAAGCTGGAAGAAAATACAAGAGGGCTCGCAGGTTCTGCAGTGGATTACATGGTCTGTCTCCTGTCAGACATTTTTATTCCTACATATGATGGCCCGAGCAACTTTGCAAACAACCTAATGGGCCACCGCCTATACTATGGTTTCCGGACAACAATCACACCAAACAGGAAGGCCCTAGCTCCCATATTCATGGACAGGGAGGAAGGTCGCGCCGCTCGCTTTGAGGAGCGAGTCAGGCAGGTTATGTTCAACACATATTTTGGTGGCCCCCACAAGCGTGTCCATCCAGAATCTTTCTACACAAACTCATGGCCTGAGTGCTTCTGCCAACCGAATCCAAGGAACCGTGCAGACAAATGCCCTCCGGACAACATATATGAGGTTCTGGAGAGCCAATTTCAGAGTGTAGAGGGTGAAGAAGATATTGAAGAAGTGAAATCCACTAATCAGACTGACTCAACGAGCCAAATAGAAGAATTAGTGGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MRRGVHAEALLLRRRRGPARLWVAVLALLAGTLWLFSSSSSAGLGLGLARSSYGLQDVDVNKLWRTADSNGWRASSAPRTYWPPPPIESESNGYLRVRCNGGLNQQRSAICNAVVAARIMNATLVLPELDTNSFWHDESGFLGIYDVLHFIKTLKYDVRIAMVIPEITTNGKTKKLKAHQIRPPRDAPVTWYTTVALEKMKKYGAIYLTPFSHRLAEDIDDPELQRLRCRVNYHALRFKPHIMKTSSEIVNKLRTEGHFMSIHLRFEMDMLAFAGCIDIFTPQEQKILIKYRKEHFAEKELIYRERRLIGKCPLTPEEVGLILRSMGFDNKTRIYLASGDLFGGKRFMKPFKAMFPRLENHSTVGPGKLEENTRGLAGSAVDYMVCLLSDIFIPTYDGPSNFANNLMGHRLYYGFRTTITPNRKALAPIFMDREEGRAARFEERVRQVMFNTYFGGPHKRVHPESFYTNSWPECFCQPNPRNRADKCPPDNIYEVLESQFQSVEGEEDIEEVKSTNQTDSTSQIEELVV</aaseq>

Gene Sequence

<dnaseqindica>1..168#1665..1746#1830..1906#2006..2094#3102..3225#3316..3599#4022..4151#4609..5244#ATGCGCAGGGGCGTCCACGCCGAGGCGTTGCTGCTGCGTCGGCGGCGCGGGCCGGCGAGGCTGTGGGTCGCGGTGCTGGCGCTGCTCGCCGGCACCCTCTGGCTCTTCTCCTCCTCCTCCTCCGCTGGCCTCGGCCTCGGCCTCGCCCGCTCCTCCTACGGACTCCAGGTGCGTGTGCGCCGCCTCCTGCTTCCCTCTCTTGCGTGTGAACAGCAACAACACTCCTTCCAGTTGTGATGATTGTGCTGTTCGATCGATCTTGGGAATACCCTCAAATGGAGCGAGATTTGAGGATGGGGATATTCTCCGTGCTCTCTTCTGATTTTAGCCAGCCTCGCCTATTTTGGCACAACGCAAGAACAGCACTAGGATTTATGAGGGGATTAGTTACAACATACCTACTTGATGAGGTGTGGAATTAATGCCCCTCCCCCTCATCCCTTCCCTCTTGGGAGGGAAGTAATATATATGGGTTTCATTTCACTTGGAACATCCTCATGAGTGGAACAAACCCTTTTATAGCTTTTTTTTCTTTTGCGGTGTGAACTTGGCCAAGAGGTTATTATGGGTAATGGAACTGATAAGATTTTTTTTTTGGTAACATCGATAGCTTGCTTGCACGAAAACTGCCGTTAAGTAATTGTTTCGTTCTACAAGGAATGTGCTAGTTCATCTATTTTAGAGTAGGTTACCTTCGTGTATGATTNGTTGCACATTAAAGCCCCGAAGTTGTACAGATGAACATGATCAATAGAACTGCAAATGGTGATTTCTTACACTTGATTGATGTAGATGGTCTGCCTTCTGTTGTCCCTCATCACATCTGCATATGAATTTCTGTCCAATAGGACTTCTTTATATGGAAACCTTTTTTGGACTGTGGTGGTGTGGAAATGGTGATGATAGTGTTGTGACATTTACTTAGGACTACAAGAAAAGAAACAAGTGAGTGTGAACTGTTTCTGATTCTCTCAGTATTGTGGTGGATAAAGACCAAAGTTCGGTCACCAAACCAATGTTGACAGATCTTGTGGCTGTGTGAAGTGTATGGGGGTAATGAAGGAGCTACCATAAAACTATTATCAGCATTTCCTCTTGCTGATCCCTTTTGGTGCTTCACTTAGCTGCAATTTCAAATGACACGACTGGGATAACATACTTGCATTTAAATAGTACAACAAAGTGTGATTTCACATTCATTGTGGAATTGCATAGCCAATTGGACAGTATTGTATGTCAAAATATTCTAATTGAAAGAAAAAGAGTATACTAAAAAAAGAAAATGAAATTATATACCTATGACCATTCATTTTCTTAGTTGAGACCTGGCTGAAAAACTGGTTGTGCTCCATACATGCATGAATTACAGTTGGAGATGATAAATGCATCTGTATAGTAGGTAGAATTGCACCTTTTCTATGAAAATAGTTAGTACACATATTAACAGCTCGTAATTTCAAGTGGAAAATTTGGCGAGATTTTATCTGAATAACAAATAATAGCTCTGAAAGGAAGTGACAATCTTTCCTAGAATTTTTATGCACACTATTTTTTAATTCCCATTTGGATTACCACATTACCAATGTGATGTATTTAAGTTTTACATTTCTTAGTTAGATTCCCAATTTAAAGTTCTCACACTGACATCAGTGCTATTACTCAAGGATGTTGATGTAAATAAGTTGTGGAGAACTGCAGATTCAAATGGTTGGAGGGCATCTTCTGCACCGCGCACCTATTGGCCTCGTATGTTTGTCTCCGTGACCTCCTTGGAAGTTATTAGTGATGTGTATAGTGGATCTGATGAATAGTCATATCTCTATTTGCAGCTCCACCAATAGAGTCTGAGTCAAATGGTTACTTACGTGTCCGGTGCAATGGTGGCTTGAACCAACAACGTAGTGCGGTATGATGAACACATGAAAATCTCACTCTCATGCAAATTTCTTATTATTCTTGATATGAAATGAAGGAAATTAATATTGGTATCATCCTATTTTTATAGATATGTAATGCTGTTGTTGCTGCACGAATAATGAATGCTACACTAGTGCTGCCGGAGCTGGACACAAATTCTTTCTGGCATGATGAGAGGTATCTCTTTTGTTTATACTGGTCTTTGATAGGGGAATGCTATTTTATGTCTAGCATTCTAGCTTAGAAGAAACCATGTGTCCTTTGTGAAGTCTGATGTCCTGCAAGCAAATTTATGTAGTAGATTCTACATATATTTTATTACAAATAGCACAACTATTATATTCTATTGGTTCAACCACATCTCAGTTGTGTTATTCCCACAACATATTTCTATTGTTGGCATTAGTTGATTATTACCTTTTTTTTGCTTTTTTAATGCCTTATTTGTGATAAAGTCATATTCGGATATTGAAACCAATAATTTCCATGTAGCTGGTGCCATGTAGGTTAATGCCCTGGTAGTATTTTTGGTAAGCTAAATGATGATAACTAGCAACTTAGCATATATGATACTTACCATAATTAATAATGCTAAATATCTTCCTATGAATTGATTCGTGCAGTCGAAATATTTATTTTTCTGTAAAATTTAGCACATTGTATCCGTGCCTGGACTTGCACAGTATCAAGTTCTTATCATTCTGAAAATGTTAGGATCTGCTTTTCTTAAAGAAAATTAATATCTACATCAGGCAGATTTATGTAACCAGTATACTGCCTTGTGTTGTTCTCAAAGTATGGTTGATAGAAACTTGTCCCGTTTTAGGAAGGATTGCATTGTTGAGTGTTGGTCTGTTGGATGTTTTCTGCAGAGGTGTTACCATATTACAGAACTTGTAGAGCAACATGTGGTACATTTGTTTGTGATTTCATACAGCTCCTATCATAGCTACTGCACTGATGCCATGTCAAACATGTGATCATAGCAAGACCATCATAGCTGCATTTCTTACAAGTTATTTTTTTCCTAAACACATGAGATCCATGCGGACATTTGCTTTCATTATGCTTCTTTTATGTGTTTTCAGAATGCATTATTTCTTAACTTGTTTATGTTGAATGATGTATTAATGACTGATTCTTGGTTAATGTTCACTTATTATTGCATTTATATATGCACCCAGTGGTTTTTTAGGTATTTATGATGTGCTCCACTTCATCAAGACATTAAAGTATGATGTTCGAATTGCTATGGTCATTCCAGAAATTACTACAAATGGAAAGACCAAGAAGCTGAAAGCCCATCAGGTGAATAGATAATGAACTCCCTAGTTTGAGTTGTACAAAATCAGTTTGTATAGAGATATAGTGCACTATAAAATACCTTTTTCCTTACAGATTCGACCGCCTCGAGATGCACCAGTTACGTGGTATACAACAGTTGCTTTGGAGAAGATGAAGAAGTATGGAGCTATATATTTAACCCCATTTTCACACCGCCTGGCAGAAGACATTGATGATCCAGAGCTCCAGAGATTGAGATGCAGGGTGAATTACCATGCACTACGATTCAAGCCTCACATAATGAAAACAAGCAGTGAGATAGTCAATAAGCTCCGTACAGAAGGCCATTTCATGTCAATTCACCTTCGATTTGAGATGGATATGCTTGCATTTGCTGGGTAAGTAGGTATTTACATTGGCTGAGGTATTGTGTGTTCTTGCATGAGTGCTGAATAAATTGTCCTACTTCATTTAAGCCTAGAAGTTTCACTTTGAGGTTCAGTTAGCATTGTATAAGCTTGCTATAATGCCTGACTTAGCAGAGGTCTTCATAAGAACTAATTAGAGTTTCGCTTGAAAATCTTAGTCATTTGCAGTCCTTGATACTGTTCATGCTAAGTTCATTTAATTCAAACAAAACCCATTATCCATGTGCAATTTAGTTCATTTATCTTCTCAGATTGATAGCTGATCGTCTATTTTCACTACTATCAGTATCTTACGCATGAAAGTTTAAGTCATGCACTTGTCACATATTGCATATTATTGTTGTGCATTATTGGGCATACCACCTTCCTTATTTCCAAAATGAAAATTACAGGTGCATTGATATATTCACACCTCAAGAACAGAAAATTCTGATCAAGTACCGCAAGGAACATTTTGCAGAAAAGGAACTTATTTATAGGGAAAGAAGGCTCATCGGGAAGTGCCCTTTAACTCCAGAAGAGGTACTGAACCTTTTTCTAGATATATATATTTTTTGGATAATTTCAATTATATTATTTATTTAGTTATGTATCCAAATTAGTGATGATTTGCTTACTGTGTGGTATCAAACCTTTTTATTTTTGTTTACATTCCACGATTTAAACCATGTCTAATACTTGACTTGAATTCTTAAGTTCCATCCTTCCACAAAAACAGGATCTGGAATCTGTATTCTTTATCATGTTTCTTGATTTTCGTTCTGTTGAATGTTGATGTTAGCTGTAGTTAATTTGTAGTTCTGCCTTAAATGCCATATATGATAAGTTGAAGCAGATGCAAAGAAATTTTGTTTCTTTAGTAAAGCTGGAAAATTGTAGAAAGGAAGTGCAAAACATACCACTTGACATTTTTTTCCATTAAAGAACACTTTCTGTAAACAACCGACGCAATATCATGTTCTACATTATTAATGTGCAGGTAGGTCTTATTCTTCGATCCATGGGATTTGACAATAAAACAAGAATCTACCTTGCTTCTGGCGATCTCTTTGGTGGGAAACGATTCATGAAGCCATTTAAGGCTATGTTTCCACGCTTAGAAAACCACAGCACTGTTGGTCCTGGAAAGCTGGAAGAAAATACAAGAGGGCTCGCAGGTTCTGCAGTGGATTACATGGTCTGTCTCCTGTCAGACATTTTTATTCCTACATATGATGGCCCGAGCAACTTTGCAAACAACCTAATGGGCCACCGCCTATACTATGGTTTCCGGACAACAATCACACCAAACAGGAAGGCCCTAGCTCCCATATTCATGGACAGGGAGGAAGGTCGCGCCGCTCGCTTTGAGGAGCGAGTCAGGCAGGTTATGTTCAACACATATTTTGGTGGCCCCCACAAGCGTGTCCATCCAGAATCTTTCTACACAAACTCATGGCCTGAGTGCTTCTGCCAACCGAATCCAAGGAACCGTGCAGACAAATGCCCTCCGGACAACATATATGAGGTTCTGGAGAGCCAATTTCAGAGTGTAGAGGGTGAAGAAGATATTGAAGAAGTGAAATCCACTAATCAGACTGACTCAACGAGCCAAATAGAAGAATTAGTGGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033996