BGIOSGA034048

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Revision as of 08:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034048| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034048, complete gene.| tag = OsI_359...")
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Gene Name

BGIOSGA034048

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034048, complete gene.

LocusTag

OsI_35996

Ensembl Transcript ID

BGIOSGA034048-TA

Ensembl Protein ID

BGIOSGA034048-PA

Length

4825

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:11725613..11730437

Sequence Coding Region

11730071..11730437,11729906..11729980,11729488..11729522,11729331..11729406,11728889..11728978
,11728719..11728794,11728536..11728614,11728277..11728411,11728000..11728098
,11727673..11727774,11727450..11727596,11727151..11727243,11726819..11726982
,11726338..11726716,11725979..11726064,11725831..11725873,11725613..11725714

Genome Context

<gbrowseImage1> name=IndicaChromosome11:11725613..11730437 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:11725613..11730437 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGGAACAAGACACGAAGCCTTTCTTGTCCCCGACCACCACCACCACCATCCCGCCGCGAGCCCACCGTGGATACAAGCTTAGCGCTTGCCACCACCACCACCACCAGATGACGGCGGCGGCACCGGATCAGCGCAGTGCAGGCGCAGGAGCGGCGGCAGCAGCAGCCGGGCAGCAGCAGACGGCGGCGGCTGACTGCGTCCTGAACCGAGAATCCGATGAACTGCCGGAGGAAGAAGACGGCGGCGCCGCCACGTGGTTATTGGCTCGTCAGGCGCCCGCACGGAGGATCAGCAGGAGCTTCTGGAGCGCCGGCGAGTACGATGCGGACACCAGCGGCGCGGCGCGGCCGCCTGGAAATGTGCAGAATCGCATGTGCGTCCACCCAAAATTCCTCCACTCCAACGCGACTTCCCACAAATGGCCATTCGGAGCGGTGGCGGAGTTATTGGACAATGCTGTCGACGAGATCAAAACTGGTGCAACAAGAATTATAGTGGACAAAGTTAACGGCTGTAATGGATCACCAGCTTTACTCGTTCAAGATGATGGTGGAGGCATGGATCCTGATTCCTTGAGGCGTTGCATGAGCTTTGGATTCTCTGAAAAACAGTCAGGCTCTTCGATTGGACAATATGGAAATGGGTTCAAGACTGGCACAATGCGGCTAGGGGCAGATGTAATTGTTTTCAGTCGCTGCATGAAGAGCAGCGAGCCTACACAATCCATTGGTCTTCTCTCTTACACTTTCTTGGCCGAGACCAATCAAAAGGATGTTGTTGTTCCAGTGGTGGACTACAAATACAATCTATTGACAGGAGAAGCTAAACCACACCAGCGGCTTGGTCCAGATCAGTTTTCGTCAAATCTCTCTGTTCTGTTGAAATGGTCCCCTTTTGCAACTGAAGAACAACTGATACAAAATTTCAGTGACATTGGTCCACATGGAACAAAGATTGTAGTCTTCAATTTGTGGTCAGATGACAATGGTGATCTGGAGCTTGATTTTGATATCGATGAGAAGGATATTTTGATCAGTGGTGCTCCAAAGGCAGCAGAAACAACTAATGCTGCAAAAAGAATGAACGAAAGTCATCTGGCAAATCAGTTACACTATTCTTTTAGGGTGTATGCTTCTGTCCTATATTTGAAACTACCTGCATACTTTAGGATCATACTCCGAGGAGAAGAAGTTAAGCATCACTACATTGCATCTGATCTCAGATATACCCAATGCATTAGATATAGGCCGCAGGCCTTTGGAAAAAAGGAGGACGAGGTGGATACAACCATAGGATTTCTAGATGGTGCTCCAACCATCAACCTGCACGGATTTAGTATCTACCACAAGAATCGCCTTATATTGCCTTTTCACCGAGTTTTGAGTAGTGCAAGTAGCAAAGGCAGAGGTGTTGCAGGGGTATTAGAGGCAGACTTCATCAAGCCCACCCATGATAAACAAGACTTTGAGAAGTCACAGCTCTATCAGAAGCTAATAAACCGCTTGAAAGAAATGACGAACGAGTACTGGGATCTATACAGTCATCTGGTTGGATACCATAAGTTGCCCCGTGCAGCTTCTGGCTCTCATGCTTCTGCTGCACTTGTGCCAACTCTGTCAGGCACCATTGCTACTGCATCGTCAGAGAGGATTCCAGCCATCCGTGACAATCCAACAAATGCAATTCCAATCGCCTTTGCTCCCCATCTTGTCTCTTCACCTGTAGGAACAAATGCTGTTGCTGCAGTTTGCTCCCAGTCCCAGTCAAGTATGCAGATCACAATTGGCACTGATTTAGTAGATACAAGAAAAAGAAGAATGGAAACTCTTGATCAGATGGATGGTCGATCGAAAAGGCTGAGTATACATGATTTGGCAGGAAACAACTCTGTGGACTCGAGCAATCAGATACTACAGATATGCCAGCATATGGGAGAACGGGAGTTGAAGGAATTTTCCTACTTGAAGATAGAGAATACACTACTCCGTCAAGAGTGTGCGGAATTAGAGTCGTCAGAGAAGGAACTCTTGCTCAAGGAACAACAATTGAGCCTTGAACTTGAGCAGACGGAGGCACAGTACAAGAGCCTGTTGAACGAATACATATCGGTGGCTGCAGTTAGGACAGTGAAACGATAG</cdnaseq>

Protein Sequence

<aaseq>MAAEEQDTKPFLSPTTTTTIPPRAHRGYKLSACHHHHHQMTAAAPDQRSAGAGAAAAAAGQQQTAAADCVLNRESDELPEEEDGGAATWLLARQAPARRISRSFWSAGEYDADTSGAARPPGNVQNRMCVHPKFLHSNATSHKWPFGAVAELLDNAVDEIKTGATRIIVDKVNGCNGSPALLVQDDGGGMDPDSLRRCMSFGFSEKQSGSSIGQYGNGFKTGTMRLGADVIVFSRCMKSSEPTQSIGLLSYTFLAETNQKDVVVPVVDYKYNLLTGEAKPHQRLGPDQFSSNLSVLLKWSPFATEEQLIQNFSDIGPHGTKIVVFNLWSDDNGDLELDFDIDEKDILISGAPKAAETTNAAKRMNESHLANQLHYSFRVYASVLYLKLPAYFRIILRGEEVKHHYIASDLRYTQCIRYRPQAFGKKEDEVDTTIGFLDGAPTINLHGFSIYHKNRLILPFHRVLSSASSKGRGVAGVLEADFIKPTHDKQDFEKSQLYQKLINRLKEMTNEYWDLYSHLVGYHKLPRAASGSHASAALVPTLSGTIATASSERIPAIRDNPTNAIPIAFAPHLVSSPVGTNAVAAVCSQSQSSMQITIGTDLVDTRKRRMETLDQMDGRSKRLSIHDLAGNNSVDSSNQILQICQHMGERELKEFSYLKIENTLLRQECAELESSEKELLLKEQQLSLELEQTEAQYKSLLNEYISVAAVRTVKR</aaseq>

Gene Sequence

<dnaseqindica>1..367#458..532#916..950#1032..1107#1460..1549#1644..1719#1824..1902#2027..2161#2340..2438#2664..2765#2842..2988#3195..3287#3456..3619#3722..4100#4374..4459#4565..4607#4724..4825#ATGGCGGCGGAGGAACAAGACACGAAGCCTTTCTTGTCCCCGACCACCACCACCACCATCCCGCCGCGAGCCCACCGTGGATACAAGCTTAGCGCTTGCCACCACCACCACCACCAGATGACGGCGGCGGCACCGGATCAGCGCAGTGCAGGCGCAGGAGCGGCGGCAGCAGCAGCCGGGCAGCAGCAGACGGCGGCGGCTGACTGCGTCCTGAACCGAGAATCCGATGAACTGCCGGAGGAAGAAGACGGCGGCGCCGCCACGTGGTTATTGGCTCGTCAGGCGCCCGCACGGAGGATCAGCAGGAGCTTCTGGAGCGCCGGCGAGTACGATGCGGACACCAGCGGCGCGGCGCGGCCGCCTGGAAGTACGTGTGTATACACCGCGATGCGGATGAATTTTAATCGCCTTTAAATTCTTATATTCTCATCCTGTGCTCCTCTCGATCTCGTGGCAGATGTGCAGAATCGCATGTGCGTCCACCCAAAATTCCTCCACTCCAACGCGACTTCCCACAAATGGCCATTCGGAGGTAAGCGATTATTTTTCGCTATAAACGTGTAAGTGGTTAATCCACGAACCAATTTATACTTTAAATATGTGGAGCAATTTTACGGTCATTGAGGAGGTACTATAAGACACCAAAATTTAGTGTAAAATTTGGTACTTATAGTAGATACCAAGAGGTACTAAATTTACAATAGAAAACGTGATAAGTTATAGTACATCCTTAAGGACTGTAAAATTACTCAAATATGTGGGTACCACTTATTTAAACTTATATAAATGGGAAATCCACTTATCTGAAGTGTAAGTGGATAGTACACTTACTATTGGTAAATACTTTGTATCTATCCCTAAACTGAAATATCAGACGATTGTTTCTGTCTTTATATGTTTTTGATATTCTTGCAGCGGTGGCGGAGTTATTGGACAATGCTGTCGACGAGGTGATTCAAACAGCTAATTAATTATGCATTTCAATAATTTGATGATCTGGGGATATATATCTGATTGATTTTTTTTGACAGATCAAAACTGGTGCAACAAGAATTATAGTGGACAAAGTTAACGGCTGTAATGGATCACCAGCTTTACTCGTTCAAGGTTCTGGTTACTGTGACAATGTTATATTCGTTTACTTGATTTTGTATAGGTGCAAATTTTGACAGTAATAACAGATGGTCTGAAATTTCAGTAATGCAACAAATGTCTAATGGCTTGGTCAACTGAAATTGCATCCAGACAATGGACATAAGTAAAAAAAAAATGCCAATATCAATATTCTCTTTACCTTCTCTGATGGACTTAGTGTAACTACAGAATTTGCATAATGTTGCACTGGGAATCTCTTTCTGATTGACTTAGTGTGAACTAGAGTGTCTGCTTAACGTTGAGTATTTGCTTAATGTCACCACATGAAACTAAATGGCTGTACATTTTTCTGTTTGTCATACAGATGATGGTGGAGGCATGGATCCTGATTCCTTGAGGCGTTGCATGAGCTTTGGATTCTCTGAAAAACAGTCAGGCTCTTCGATTGGACAATGTATGTACTACTATATCATATATTCAGGTTTTTATCCTCTCCAAACTTAACTTATATTGTTATCTTGTATATTGACATTCATTGATCTGACCAGATGGAAATGGGTTCAAGACTGGCACAATGCGGCTAGGGGCAGATGTAATTGTTTTCAGTCGCTGCATGAAGAGCAGGTCTAGCTAGTCTCATTTCCCTATATATATTTTTTTTTACTTATACCAACTTGTTGCCCTTTCCCCCCTTACTTTCTTACACTTTCTTTTTTTTTTTATTCCAGCGAGCCTACACAATCCATTGGTCTTCTCTCTTACACTTTCTTGGCCGAGACCAATCAAAAGGATGTTGTTGTTCCAGTGGTATGCTTTGCCATCTGATTTTATCAATTGGGCACAACACACACACAAATATATATATAGCGCTTAGCCATCACTTACCTCTTTTACTGTGATTATTCTGATGACATTTTTTTTATTTCATTAGGTGGACTACAAATACAATCTATTGACAGGAGAAGCTAAACCACACCAGCGGCTTGGTCCAGATCAGTTTTCGTCAAATCTCTCTGTTCTGTTGAAATGGTCCCCTTTTGCAACTGAAGAACAACTGATACAAAATGTATGTTACATTAGGTTGCTACCCTGAAAGAAGACATTTATATTACTATAAACTCGCAAATTAATTTTCAAAAATTTTGGAGCTTGGAATGGAACTATTTGTCTGTTATTTATTTCAGTAGTTGTAAGTAATTTATCGTCAATTCAGTGTGCTAATGGTGTTTAAAATGTGGTTACAGTTCAGTGACATTGGTCCACATGGAACAAAGATTGTAGTCTTCAATTTGTGGTCAGATGACAATGGTGATCTGGAGCTTGATTTTGATATCGATGAGAAGGTAAGCAAAACATCTAAAAGGATTTGACTTCAGTAAACTTTTAAATTGTAAAATACATGCGTAATTCTGAAGTTTCTTTCACTTCTGTTGAATTACTAAATAGCTCCTGATCTCTTGGACAATCTTTATCATTTTTCAGTTGCTATGAAATATCTCATTATTTTCCATGTGTCTTTCATTATATATTGTATATGTTTACCATATTCCTTGTTGTTTTCATTTCAGGATATTTTGATCAGTGGTGCTCCAAAGGCAGCAGAAACAACTAATGCTGCAAAAAGAATGAACGAAAGTCATCTGGCAAATCAGTTACACTATTCTTTTAGGGTGCGTATCACATGGTTAAGTGTTTCTGCACAATACTAGTTAATTGATTTTGCTAATATATATTAGCATTTTGCAGGTGTATGCTTCTGTCCTATATTTGAAACTACCTGCATACTTTAGGATCATACTCCGAGGAGAAGAAGTTAAGCATCACTACATTGCATCTGATCTCAGATATACCCAATGCATTAGATATAGGCCGCAGGCCTTTGGAAAAAAGGAGGTTCGTCTTCAACAAAACCATTCCCTTTTGCTGAGTTGCATACACATTACCTGTTCACTTCTGTAACAGTGTGAACATGTAATGTCTAATACATTCCTTTTTTCGAACGAATATGTCTAATACATTTCCATTCTCAAAGTATTGATATTTACTTCTGTGTTGTTTAAATCGTTTCCCTTTTACATCCATTTTGTTCTTCAATTTAGGACGAGGTGGATACAACCATAGGATTTCTAGATGGTGCTCCAACCATCAACCTGCACGGATTTAGTATCTACCACAAGAATCGCCTTATATTGGTGAGCTACTGATTTCTTTTGCATTCACTATGTAAAAAAAAAAAAAGAAGAAGAGAAGATGCTTTACGGGCATAAACATCAAAACTAATCAATTTTCACTCAACCACATTCAAGCTATTTTTGCCTAACATTTTTTTATCTTGTTTAAAACAAAATGACCTCTTTCAGCCTTTTCACCGAGTTTTGAGTAGTGCAAGTAGCAAAGGCAGAGGTGTTGCAGGGGTATTAGAGGCAGACTTCATCAAGCCCACCCATGATAAACAAGACTTTGAGAAGTCACAGCTCTATCAGAAGCTAATAAACCGCTTGAAAGAAATGACGAACGAGTACTGGTACAACTGCTAAATTCCATCTTGTTTCATGTAAATCCAATACCTGTTTCTAATAATTCAATAATTCATATCTCATCATTCAACTATTTCACCTGTTTCCAGGGATCTATACAGTCATCTGGTTGGATACCATAAGTTGCCCCGTGCAGCTTCTGGCTCTCATGCTTCTGCTGCACTTGTGCCAACTCTGTCAGGCACCATTGCTACTGCATCGTCAGAGAGGATTCCAGCCATCCGTGACAATCCAACAAATGCAATTCCAATCGCCTTTGCTCCCCATCTTGTCTCTTCACCTGTAGGAACAAATGCTGTTGCTGCAGTTTGCTCCCAGTCCCAGTCAAGTATGCAGATCACAATTGGCACTGATTTAGTAGATACAAGAAAAAGAAGAATGGAAACTCTTGATCAGATGGATGGTCGATCGAAAAGGCTGAGTATACATGATTTGGCAGGAAACAACTCTGTGGACTCGAGCAATCAGGTTAGCCTAGATTACTATGTTTGTGCCCATAATATTGAAAATACACATTTTTTTTAAGAAAACAGACAGGAGAACTACCCATTATATTAATAAAGTAATAGTAAAAAAACTTATCACAACACCTGAACACCAAAAATATATGATTGCAACCTACACTAACAAATTACTTGGCACTTAATGTTTATCCAGCTAGACTAATTTTCGATTAGATTTTCACATCTTTTTTATCTGACATAGTAGTTTATGCGCTGTATTGAGATCTAATGACTACAGATACTACAGATATGCCAGCATATGGGAGAACGGGAGTTGAAGGAATTTTCCTACTTGAAGATAGAGAATACACTACTCCGTCAAGAGTAAGTCCAACAACAGCTCTCGCCTTACTTCCATCATGGAACAATTTTTGGCCTAAAAGTCTCAGGACTTCATTTTGTTTTTTTGTTTCACAATTTCATATGCAGGTGTGCGGAATTAGAGTCGTCAGAGAAGGAACTCTTGCTCAAGGTGACATTTTTTATGTTGTGATTTGTTCAATCTTACTCACTAGTACACTACACCAGGTGCATCTTGGCTAAAATCAAACTGCACTGACGAACTTAATTATTTGTTGTACCGAGCAGGAACAACAATTGAGCCTTGAACTTGAGCAGACGGAGGCACAGTACAAGAGCCTGTTGAACGAATACATATCGGTGGCTGCAGTTAGGACAGTGAAACGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034048