BGIOSGA034168

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Revision as of 08:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034168| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034168, complete gene.| tag = OsI_357...")
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Gene Name

BGIOSGA034168

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034168, complete gene.

LocusTag

OsI_35764

Ensembl Transcript ID

BGIOSGA034168-TA

Ensembl Protein ID

BGIOSGA034168-PA

Length

5294

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7897669..7902962

Sequence Coding Region

7902896..7902962,7901770..7902143),complement(7901479..7901679,7900987..7901172),complement(7900354..7900569
,7899981..7900198),complement(7899422..7899497,7899230..7899325),complement(7897669..7898796

Genome Context

<gbrowseImage1> name=IndicaChromosome11:7897669..7902962 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:7897669..7902962 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTGCGCTATGCTGGTGGCAGCAGCGGTTGAGGTCGCCGTCCCAACCCTGGCTGAGGCTGCAGCCTTGGGAGCCATAGGTGCAATTCTGGCAGGGCCCTTAATGCAGCCAACTAAGGTTCGATCCCCTGTCAGAGTAAGAAATAGCAATTTGAAGTGCCATGGAACCAAGATGAGATCTCCCTCAATGGTTTCAATGTCCCAGAGCCAGCGCATCAAGATACCGTCTTATGTCGGTCTAAGCACAGTGCATACTCCTGCACTACTCACACCTGTCATTAGCTCGAGATCGACAAGAACTTTCCAAAAGACAGCAAAAACAATACAAGAACGGTCTCATGCCGTTATGCAAATCCCTGAATTTACACCTGGCACTGGCTTGAGATCAACCAATGCGATTCAGAGAACACAGAAGTACTGCAGAGACATTCTCATGTTGAAGACAACCAAAGTGCCGAAACAGCCTCGTTTCGTCGCCAGGGCGATTGATAATTTCAGCAGGGAGGTGATGAATGCTATCGCGGTTGCGCACGACGAGGCTCAATACATTGCACATCTCACAATCGGGAGCACGAACATCCTGCTTAGCCTCATTTCACAGTACATTTGCATTTTCCTCCTGGAAATCATACTCAATAAGGGTAAATTGGACCCTGTTGTCGGAAGGCAGAAGCAGATTGATCATGTCGTCCAGATTCTGAGCAGACGGACAAAGAACAACCCTTGCCTGATCGGAGAGCCTGGTGTTGGAAAAACAGCAATCGCAGAAGGGCTTGCTCAGCTCATTGCCACAGGGGACGTTCCTGAAACAATTCAACAGAAAACGGTTATCTCACTTGACATGGGACTTCTTGTTGCTGGTACGAAATATCGAGGAGAGTTGGAAGAAAGACTGAAGAATATCTTGGAAGAAATCAAGCAGAACGGTGAAATAATACTATTCCTTGACGAAGTCCACACTCTAGTAACAGCAGGATCAGCAGAAGGTGCTATTGATGCTGCTAATATTTTTAAGCCAGCACTGGCAAGAGGTGAACTACAGTGTATTGGAGCCACTACAATTAATGAATACAGGAAGCACATCGAGAAAGATGCTGCATTAGAAAGGCGCTTCCAACCTGTAAAAATTCCAGAGTCAACAGTTGTTGAGACCGTAGGAATTCTGAAAGGACTTCGAGAGAGATATCAGGGTCATCACAAGGTCCAATACACTGATGAAGCCCTTGTTGCAGCTGCTGAACTCTCCCATAAGCACATCAGAGATCGTTTTCTCCCTGACAAAGCCATTGATCTGATGGATGAAGCAGGTTCGATCGTCAGGCTACGAAATGCCCAGTGTAAACCATCGAAGAAGGTTAATGATTTGGAGGCAGAGCTCAAGAAAACCTTGAAGGAGAAGAATGATGCCATCAGCATACAGAACTTCAGAAGGGCAAAGCAGCTTCGCGATCATGAGCTGCAGCTCAGGACCAACATCTCAGCTCTAACTGACAAGAAAACGCAGATGATGGAGCCAGACGCCATTGCCATGCCAGTGGTCACCGAAGACGACGTCCGGCACGCCATCTCAAGGTGGACCGGCGTCCCATTGCACAAGGTGTCCATGGACGAATCAAGAAAGCTCCTCAAGCTGGAGGACGCCCTGCACCGCCGCGTCGTCGGCCAGGGCGAGGCGGTGGCGGCGGTCAGCCGCGCCATCCGCCGCGCCCGCCTCGGCCTCAAGCACCCCGGCCGGCCCGTCGCGAGCCTCGTGTTCGCCGGGCCAACCGGCGTCGGCAAGTCGGAGCTCGCCAAGGCTCTCGCGGCGTGCTACTACGGCTCGTCGGAGTCGGAGGAGGCGGCCATGGTGCGGCTCGACATGAGCGAGTACATGGAGAAGCACGCGGTGGCGAGGCTGGTCGGCTCCCCGCCGGGGTACGTCGGGCACGGCGAGGGTGGCCAGCTGACGGAGGCGGTGCGACGGCGGCCGCACGCGGTGGTGCTGCTCGACGAGGTCGAGAAGGCGCACCGCGACGTGTTCGACCTGCTGCTGCAGGTGCTCGACGACGGCCGCCTCACCGACGGGAAGGGGAGGACGGTGGACTTCAAGAACACGCTCATCGTCATGACGACCAACATCGGCAGCAGCCTCATCGTCAACAACGGCGGCGACGGCGCCGCCGCCGCCGGCAGGATCAAGAACACGGTGACCGACGAGATGAAGCGCCACTTCCGGCCCGAGTTCCTGAACCGGCTGGACGAGGTGATCGTGTTCCAGCCACTGACCGAGCTCGAGGTCGGGAAGATCGCCGGGATCATGCTGGAGGAGTTCGCCGGGAGGGTCAGGGAGAAGGGGATCAAGCTGAAGGTGACGGACAAGTTCAGGGAGCTCGTCGTGGAGGAGGGATTCGACCCGAGCTACGGCGCGAGGCCGCTGAGGCGGGCCGTCGTGCGGCTGCTGGAGGACACCCTCGCGGAGAAGATGCTCGCCGGAGAGGTCAGAGAAGGGGATTCGGTGATCGTCGACGCCGATTCAGCTGGGAATGCCGTGGTCAGGAGGAGCAACGCCATGCCTGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MPCAMLVAAAVEVAVPTLAEAAALGAIGAILAGPLMQPTKVRSPVRVRNSNLKCHGTKMRSPSMVSMSQSQRIKIPSYVGLSTVHTPALLTPVISSRSTRTFQKTAKTIQERSHAVMQIPEFTPGTGLRSTNAIQRTQKYCRDILMLKTTKVPKQPRFVARAIDNFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLISQYICIFLLEIILNKGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLVAGTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTVVETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKVNDLEAELKKTLKEKNDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIAMPVVTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEDALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAACYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVGHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIVFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVVRRSNAMPA</aaseq>

Gene Sequence

<dnaseqindica>1..67#820..1193#1284..1484#1791..1976#2394..2609#2765..2982#3466..3541#3638..3733#4167..5294#ATGCCGTGCGCTATGCTGGTGGCAGCAGCGGTTGAGGTCGCCGTCCCAACCCTGGCTGAGGCTGCAGGTGCGTGCCACACACACATAATATATACATAGGCTCACTGTGAAACCGGTTTTTTCTTCACAATTATGATAATTTCATTAAAAAAATAATTATGACAATAGTCACCGCCTGCTCATAACCAAATTTCCAACTCCAACCCATAAGAAAATAATGACCGACTGCCCACCCAGACTATCCTATAACTGGCAGTGAAACTGTTTCCAACCAAAAAAAACAAAAGAATCGTTATAGGATTGTTCTTATACTGTGTCCATGCCAAGAATCTTTACATTTCTCTAATGGAAATGGAGGGCTTTGCCCTTTGCTCTAAAAAACAATACTGTGTCCATGCCTTATTTTGAAACAGTAAACAATTTAAGGAGATGTTTGCAGTGTAGGATGACTTGATTAGTTTAGTTTTGCTGGACTGTTATTCTTCTCCATTGGAAAGTTAAGTGGCCTTTTCAAAAGGACAAGAAAACACAAGAACATTAACTAAAAACTGGAATCAGCTGATGATTCCAATAGATTGGTGAAAACTGATTGTTTTAAGATATGTCTGACCATGCATAATATTATTGTCTTCAAATTGTTTATGTGATGAAGGCAACTAAATTTACTCTTGTCGACTTTTGTTGTACCATACATAGATTGTTTCAGTTCGAACTTTAGTTACTAATTGTTACAAATTTGAACTAACAAATTCTTTTAAGAGGAAACATCTAACACCTGTTTTTTTGTTCTCTTGATGCAATTTATTGTCATCCATACAGCCTTGGGAGCCATAGGTGCAATTCTGGCAGGGCCCTTAATGCAGCCAACTAAGGTTCGATCCCCTGTCAGAGTAAGAAATAGCAATTTGAAGTGCCATGGAACCAAGATGAGATCTCCCTCAATGGTTTCAATGTCCCAGAGCCAGCGCATCAAGATACCGTCTTATGTCGGTCTAAGCACAGTGCATACTCCTGCACTACTCACACCTGTCATTAGCTCGAGATCGACAAGAACTTTCCAAAAGACAGCAAAAACAATACAAGAACGGTCTCATGCCGTTATGCAAATCCCTGAATTTACACCTGGCACTGGCTTGAGATCAACCAATGCGATTCAGAGAACACAGAAGTACTGCAGAGACATTCTCATGTTGGTCTAAGCAGCCACATGCTGTCGTCTAAGAGATATGCATACAGCTTCAGGTAGGCCTGTCATTGGCTTGACACCAACCATTGTGTCTCAGAAGACAACCAAAGTGCCGAAACAGCCTCGTTTCGTCGCCAGGGCGATTGATAATTTCAGCAGGGAGGTGATGAATGCTATCGCGGTTGCGCACGACGAGGCTCAATACATTGCACATCTCACAATCGGGAGCACGAACATCCTGCTTAGCCTCATTTCACAGTACATTTGCATTTTCCTCCTGGAAATCATACTCAATAAGGTATGTTTTGTTCAAAGCATTTTTCCCTCTGACCACAAAGGATCACACAAGAAGCAATGATTTTTAAGATTTTTTTTTTATTTGTGGTTATCGGTAATGATTTTTCTCTTGCAAGTTAGGCTTACAAAATGTTCAGAGCTGCTGTTAGGAGAGCAACTAGGGGAGCTAAGTTAGCCACACTTATGGAGTATGGGACTAATCTAACAAAATTAGCAGAGGAGGTACTGTGATACATATACCTATTGCAGTGCAACAACACTGAGAATATCCTATGATATTAACCGGAAAATCAATCATATTTTGTAGGGTAAATTGGACCCTGTTGTCGGAAGGCAGAAGCAGATTGATCATGTCGTCCAGATTCTGAGCAGACGGACAAAGAACAACCCTTGCCTGATCGGAGAGCCTGGTGTTGGAAAAACAGCAATCGCAGAAGGGCTTGCTCAGCTCATTGCCACAGGGGACGTTCCTGAAACAATTCAACAGAAAACGGTTCGTCTCTTCGTTCTGATTCTGTTTTGATTATAATGCTCTGCTCTTGCTAACCATGTTACAGTTACATGAAACTTAGTATATGAAACTAAATATCGCGTTTATCTAAAGTAATGAAAATAAATACCTGGCAAACGATTATTGTGAGATTTTAGCCATTAACCTTGAATGCAGAATAAACATAGACCATTCTACATTATCTCCTCTATACATAAGATTTTGAAGTGATTTCCTTTCTGGACATACATCCAAATAATTTTCACAAAAATTTTAGTAGTGACTAGGGTGTACTAGGTATTGCCTGTGTTTCAAACTATTTATGCTCTAGGTTTGTCATGTCATCAGTCAAATATTTTAATCTTTGACCATTAATTTATATAAAACTCATATAGTTTAACAACACTCAATCAATGACAGGTTATCTCACTTGACATGGGACTTCTTGTTGCTGGTACGAAATATCGAGGAGAGTTGGAAGAAAGACTGAAGAATATCTTGGAAGAAATCAAGCAGAACGGTGAAATAATACTATTCCTTGACGAAGTCCACACTCTAGTAACAGCAGGATCAGCAGAAGGTGCTATTGATGCTGCTAATATTTTTAAGCCAGCACTGGCAAGAGGTGAACTACAGGTAGCAATGTTATTGTTGCCTCTTTACAAATGCTTATGAAATATATTATGATCTTATCCTACTATAGAGTATAGATCAGGCCATTAGTAATATGTGAGCTATTTGTGTTCAGTTTGTTGTACTAATGTTCTCACTATGAGATCAATATTTCGCAGTGTATTGGAGCCACTACAATTAATGAATACAGGAAGCACATCGAGAAAGATGCTGCATTAGAAAGGCGCTTCCAACCTGTAAAAATTCCAGAGTCAACAGTTGTTGAGACCGTAGGAATTCTGAAAGGACTTCGAGAGAGATATCAGGGTCATCACAAGGTCCAATACACTGATGAAGCCCTTGTTGCAGCTGCTGAACTCTCCCATAAGCACATCAGGTTTGTGAATGTTTTTAACATTTAATATTATCATAATTTTATCATTCTTGAGAAAATATCGGGAGGTAGCAAAACTTAGTACTTTTTTCAGGTACTATATATTTCGAGGCACGAAAGTTTTTAGCGTAAAATTATGGTACAAACATGCACTTTCTCAAGAACCGTAATGTAACAGACAGATTGTAATGTCAATTAATTTGGTATATTTGGTGATAGGATGTACAGGTGTGCTTGGTTTGCTATCATGCCAAAATATTGGTACTACCAAAATCTAGGCAAGTTTTAGTAGTGCCAAGATTTTAATAACTTTTTGTATGCTATTGGTAGCAAACCAAACACTATTAAAATACTATTCAAAGTGCCAAACAATTTGGTAGGGCACATTTTGGCTTCAGCTGGTTAAGTCATTAGTACCGAGGTAGAAGAACACATTACACATTTATAGCCTTTTCACAATCTGACATAGTGTGATTTTGTCTGCAGAGATCGTTTTCTCCCTGACAAAGCCATTGATCTGATGGATGAAGCAGGTTCGATCGTCAGGCTACGAAATGCCCAGGTAGAAACACATGCAAGACCACCAAAATTAATTTCTATCCATCATTTCTCCCACGTACACATTTTTACCAAATCTCACCGTGAACTGAACCAACAGTGTAAACCATCGAAGAAGGTTAATGATTTGGAGGCAGAGCTCAAGAAAACCTTGAAGGAGAAGAATGATGCCATCAGCATACAGAACTTCAGAAGGGTAAATATGGACAAAGTGCTAGTTTTTTTAAAAAAAAATAATGGAAATTAAAAGTATCACTTCCAATCTGTGCACCAGCTTAAAATGTACACAACTATATTTGTCGACAATTTAAACTTGGTGGGTGAAGTCTCACACACCTAGATATTGATGATCGCATTAATTTCCCCTGCCAATTTTCTGGCCTCCTCTTTTCGCTTATTCCTATGCTTATTAGCTAAAATTTGAATTTTCAATTTTAAATCGAGGCTGATTTTGGAGTTTTTTCATTTAAGTTTATTTTTTAGTCTTTGCTTTTATATCGCTAAGAACACGGATATAAAAATTGTATTTACGAATTAATTTCCGTTTGCAAACATGCTGTTTGGCCCAAACGATGGAGCCGTCCATCCAAATTATGCAACTAACTGAGTCAAATTTCAATCCTGAACAGGCAAAGCAGCTTCGCGATCATGAGCTGCAGCTCAGGACCAACATCTCAGCTCTAACTGACAAGAAAACGCAGATGATGGAGCCAGACGCCATTGCCATGCCAGTGGTCACCGAAGACGACGTCCGGCACGCCATCTCAAGGTGGACCGGCGTCCCATTGCACAAGGTGTCCATGGACGAATCAAGAAAGCTCCTCAAGCTGGAGGACGCCCTGCACCGCCGCGTCGTCGGCCAGGGCGAGGCGGTGGCGGCGGTCAGCCGCGCCATCCGCCGCGCCCGCCTCGGCCTCAAGCACCCCGGCCGGCCCGTCGCGAGCCTCGTGTTCGCCGGGCCAACCGGCGTCGGCAAGTCGGAGCTCGCCAAGGCTCTCGCGGCGTGCTACTACGGCTCGTCGGAGTCGGAGGAGGCGGCCATGGTGCGGCTCGACATGAGCGAGTACATGGAGAAGCACGCGGTGGCGAGGCTGGTCGGCTCCCCGCCGGGGTACGTCGGGCACGGCGAGGGTGGCCAGCTGACGGAGGCGGTGCGACGGCGGCCGCACGCGGTGGTGCTGCTCGACGAGGTCGAGAAGGCGCACCGCGACGTGTTCGACCTGCTGCTGCAGGTGCTCGACGACGGCCGCCTCACCGACGGGAAGGGGAGGACGGTGGACTTCAAGAACACGCTCATCGTCATGACGACCAACATCGGCAGCAGCCTCATCGTCAACAACGGCGGCGACGGCGCCGCCGCCGCCGGCAGGATCAAGAACACGGTGACCGACGAGATGAAGCGCCACTTCCGGCCCGAGTTCCTGAACCGGCTGGACGAGGTGATCGTGTTCCAGCCACTGACCGAGCTCGAGGTCGGGAAGATCGCCGGGATCATGCTGGAGGAGTTCGCCGGGAGGGTCAGGGAGAAGGGGATCAAGCTGAAGGTGACGGACAAGTTCAGGGAGCTCGTCGTGGAGGAGGGATTCGACCCGAGCTACGGCGCGAGGCCGCTGAGGCGGGCCGTCGTGCGGCTGCTGGAGGACACCCTCGCGGAGAAGATGCTCGCCGGAGAGGTCAGAGAAGGGGATTCGGTGATCGTCGACGCCGATTCAGCTGGGAATGCCGTGGTCAGGAGGAGCAACGCCATGCCTGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034168

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034168&oldid=36144"