Os11g0195600

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0195600| Description = Similar to Amino acid carrier (Fragment)| Version = NM_001073957.1 GI:115484562 GeneID:4349989| Length = 1980 bp| D...")
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Gene Name

Os11g0195600

Description

Similar to Amino acid carrier (Fragment)

Version

NM_001073957.1 GI:115484562 GeneID:4349989

Length

1980 bp

Definition

Oryza sativa Japonica Group Os11g0195600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4782531..4784510

Sequence Coding Region

4782632..4783068,4783165..4783519,4783624..4784262

Expression

GEO Profiles:Os11g0195600

Genome Context

<gbrowseImage1> name=NC_008404:4782531..4784510 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4782531..4784510 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaaggcggcggcgatggaggtgtcggcgtcggcggcggcggaggcggggatgatggtgggtcatggggagtggcgcgacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgacccgtgcaccggcaagcgcaactacacctacatggacgccgtccgcgccaacctcggcggctccaaggtccgcctctgcggcgtcatccagtacgccaacctcttcggtgtcgccatcggctacaccatcgccgcctccatcagcatgctggcgatcaagagggcggattgcttccacgagaaggggcacaagaacccgtgcaggagctcgagcaacccgtacatgatcctgttcggcgtcgtgcagatcgtgttctcacagatcccggatttcgatcagatatggtggctgtccatcgtcgccgccatcatgtccttcacctattcgacgattggcctctcgctcggcatcgcgcagaccgtcgccaacggcgggttcatgggcagcctcaccggcattagcgtcggcaccggcgtcacctccatgcagaaggtctggcgcagcctccaggccttcggtgacatcgcgttcgcctactcctactccatcatcctcatcgagatccaggacacgatcaaggcgccgccgccatcggaggcgaaggtgatgaagcgcgcgacgatggtgagcgtggcgacgacgacggtgttctacatgctgtgcgggtgcatggggtacgcggcgttcggggacaagtcgccggacaacctgctcaccgggttcggcttctacgagccgttctggctgctcgacgtcgccaacgctgccatcgtcgtgcacctcgtcggcgcctaccaggtgttcgtccagccgatcttcgcgttcgtcgagcggtgggcggcggcgaggtggccggacggcggcttcatctcccgggagctccgcgtgggccccttctcgctcagcgtgttccgcctgacatggcgcacggcgttcgtctgcgccaccaccgtcgtgtccatgctcctcccgttcttcggcgacgtggtggggctcctcggcgccgtctcgttctggccgctcaccgtctacttccccgtcgagatgtacatcgcgcagcgcggcgtgcggcgagggagcgcgcggtggctctgcctcaaggtcctcagcgccgcctgcctcgtcgtctccgtcgccgccgccgccggctccatcgccgacgtggtcgacgcgctcaaggtgtaccggccgttcagcgggtag</cdnaseq>

Protein Sequence

<aaseq>MGKAAAMEVSASAAAEAGMMVGHGEWRDDDGRARRMGTVWTASA HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAECYRSGDPCTGKR NYTYMDAVRANLGGSKVRLCGVIQYANLFGVAIGYTIAASISMLAIKRADCFHEKGHK NPCRSSSNPYMILFGVVQIVFSQIPDFDQIWWLSIVAAIMSFTYSTIGLSLGIAQTVA NGGFMGSLTGISVGTGVTSMQKVWRSLQAFGDIAFAYSYSIILIEIQDTIKAPPPSEA KVMKRATMVSVATTTVFYMLCGCMGYAAFGDKSPDNLLTGFGFYEPFWLLDVANAAIV VHLVGAYQVFVQPIFAFVERWAAARWPDGGFISRELRVGPFSLSVFRLTWRTAFVCAT TVVSMLLPFFGDVVGLLGAVSFWPLTVYFPVEMYIAQRGVRRGSARWLCLKVLSAACL VVSVAAAAGSIADVVDALKVYRPFSG</aaseq>

Gene Sequence

<dnaseqindica>102..538#635..989#1094..1732#actcactcaacccaagcaacgcgcagcacaccatcaccagccaagtgttcgacagagttcttggcgagctagaggtgtcgaacaccttcaagagaggagggatggggaaggcggcggcgatggaggtgtcggcgtcggcggcggcggaggcggggatgatggtgggtcatggggagtggcgcgacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgggtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctgctcgccgagtgctaccgctccggcgacccgtgcaccggcaagcgcaactacacctacatggacgccgtccgcgccaacctcggcggctccaaggtccgcctctgcggcgtcatccagtacgccaacctcttcggtgtcgccatcggctacaccatcgccgcctccatcagcatgctgtaatcaatcaaacaatttctttgtttcgattcggtttcgatgcaaactccattgatgatgtgattgctgatagcttagttgattcgatcgagcagggcgatcaagagggcggattgcttccacgagaaggggcacaagaacccgtgcaggagctcgagcaacccgtacatgatcctgttcggcgtcgtgcagatcgtgttctcacagatcccggatttcgatcagatatggtggctgtccatcgtcgccgccatcatgtccttcacctattcgacgattggcctctcgctcggcatcgcgcagaccgtcgccaacggcgggttcatgggcagcctcaccggcattagcgtcggcaccggcgtcacctccatgcagaaggtctggcgcagcctccaggccttcggtgacatcgcgttcgcctactcctactccatcatcctcatcgagatccaggcaagcagctcgccgccgccattgccgcatcctctgtttcttggcttcttctatttcttgtgtcctaacagaacagagcgttgttgtgtgtgatgtcatgtcaggacacgatcaaggcgccgccgccatcggaggcgaaggtgatgaagcgcgcgacgatggtgagcgtggcgacgacgacggtgttctacatgctgtgcgggtgcatggggtacgcggcgttcggggacaagtcgccggacaacctgctcaccgggttcggcttctacgagccgttctggctgctcgacgtcgccaacgctgccatcgtcgtgcacctcgtcggcgcctaccaggtgttcgtccagccgatcttcgcgttcgtcgagcggtgggcggcggcgaggtggccggacggcggcttcatctcccgggagctccgcgtgggccccttctcgctcagcgtgttccgcctgacatggcgcacggcgttcgtctgcgccaccaccgtcgtgtccatgctcctcccgttcttcggcgacgtggtggggctcctcggcgccgtctcgttctggccgctcaccgtctacttccccgtcgagatgtacatcgcgcagcgcggcgtgcggcgagggagcgcgcggtggctctgcctcaaggtcctcagcgccgcctgcctcgtcgtctccgtcgccgccgccgccggctccatcgccgacgtggtcgacgcgctcaaggtgtaccggccgttcagcgggtagagagaatgtgagatcgatcggtgaccgtccgatcgaagtagtactagcactagcaaacatgtgtacgtcgtatgggcagcagagcaacactgccgttgccaggtggggcccaggtgtgagataaaaaagaacgaggtaaacaaaaaattatttactgagctttgtgtggtgttttgtcatgtaacaccttgtagattcttgtattatgagtttgattgggataacaaggctttaatggttagtgaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0195600, RefSeq:Os11g0195600