Os11g0198200

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0198200| Description = Conserved hypothetical protein| Version = NM_001073965.1 GI:115484578 GeneID:4349999| Length = 1781 bp| Definition ...")
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Gene Name

Os11g0198200

Description

Conserved hypothetical protein

Version

NM_001073965.1 GI:115484578 GeneID:4349999

Length

1781 bp

Definition

Oryza sativa Japonica Group Os11g0198200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4907069..4908849

Sequence Coding Region

4907335..4907966,4908003..4908436,4908712..4908716

Expression

GEO Profiles:Os11g0198200

Genome Context

<gbrowseImage1> name=NC_008404:4907069..4908849 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4907069..4908849 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcaagatgcctaaggcctggtggtgctcgccggcgatgccagctgctcgacggcgacaccgccgccttttgcgcctcgctggtggacggcctcgcgcagctggagagcacgctgcttcgtgaggaggacgacggcgatggcggcggcggcggcggtggggcggtgtcgatgaggtggtgcgccgacgccatgaggctggtgaagcggatgcagcgggagcttctggtcatgttcaagaaggccgacgtgccggtgggcagcgccgtctcctacggcggcggcggcggaggcggcgacggcggcgggtgctggttcgagcactacatgcaggagacggcggcgctgctcgacttctgcaacgcgttcaagtccgccgtgtcgcggctgcaccgctactgcatggtcgtcgacttcgccgcgcaggtcggctgcgccggcggctggtggctggaggaggagccgggcggcgacgacgcgggcgccatccgccacaggctgtccgacgtgagggcggcggtgagcgaggcggagcggctagggaggaagatcatgtctagctccagcggcggcggcggcgccggggacgacgacgccggcggcatggtggtcgtcatgctcgtcgccaagatcaccatggccgtcgtgtcgatgttcgtgctccaggccctcacctcacccatcgtccccctcgccgccgacgtcgacgacggccactgcacccttggccgcgccgccgccgtcccggtccccgagctccagccatggcgagaatccctctccgtgatcaccgaccggttcccgaggcggccgggcgtcgccgagcacgagagggtggccatggtggtgaagtccatgatgatcaacaccaagatggaaggagaagaagagaccaaaaatggcaaacaagaacaagaagatgaccatgttgagcttctaagaacaagatcaggtgagctcagggaaggtgtggagatgtttgattgtgttttggatgaagtgtttgatgaggtgatcaagggcaggaatgagatgcttggcatcttcagagataaggccctcacactgggctga</cdnaseq>

Protein Sequence

<aaseq>ARCLRPGGARRRCQLLDGDTAAFCASLVDGLAQLESTLLREEDD GDGGGGGGGAVSMRWCADAMRLVKRMQRELLVMFKKADVPVGSAVSYGGGGGGGDGGG CWFEHYMQETAALLDFCNAFKSAVSRLHRYCMVVDFAAQVGCAGGWWLEEEPGGDDAG AIRHRLSDVRAAVSEAERLGRKIMSSSSGGGGAGDDDAGGMVVVMLVAKITMAVVSMF VLQALTSPIVPLAADVDDGHCTLGRAAAVPVPELQPWRESLSVITDRFPRRPGVAEHE RVAMVVKSMMINTKMEGEEETKNGKQEQEDDHVELLRTRSGELREGVEMFDCVLDEVF DEVIKGRNEMLGIFRDKALTLG</aaseq>

Gene Sequence

<dnaseqindica>884..1515#414..847#134..138#atccaaatcaaagacctggcatagctaaaagccccaaaggatggttggttggttggttggttggtgagttgtctccaatctccaaactccaagaacaagaatgccaaatcaaaagagcacaagtgctaattaagcaaggtaaggtaaagctaggtgtatgcatggaatagtatgcatacctagttatcctcttgcttcactcctccccttctttcctttgaaaaaattaatcttgcctactcctccaagaaacccaactttgcttccatgcaaatgaacaaattgcactagatcattattatattgttgtatttgcacaacataaaagtgatgcccaattcaccatttcttgtttgatccttggttcttgagatttgatttaattcttgtgttgcatgcgtgacgacgatgagatgcctaaggcctggtggtgctcgccggcgatgccagctgctcgacggcgacaccgccgccttttgcgcctcgctggtggacggcctcgcgcagctggagagcacgctgcttcgtgaggaggacgacggcgatggcggcggcggcggcggtggggcggtgtcgatgaggtggtgcgccgacgccatgaggctggtgaagcggatgcagcgggagcttctggtcatgttcaagaaggccgacgtgccggtgggcagcgccgtctcctacggcggcggcggcggaggcggcgacggcggcgggtgctggttcgagcactacatgcaggagacggcggcgctgctcgacttctgcaacgcgttcaagtccgccgtgtcgcggctgcaccgctactgcatggtcgtcgacttcgccgcgcaggtcggctgcgccggcgccggcgccgccgcggagaacggcggcggcgccggcggctggtggctggaggaggagccgggcggcgacgacgcgggcgccatccgccacaggctgtccgacgtgagggcggcggtgagcgaggcggagcggctagggaggaagatcatgtctagctccagcggcggcggcggcgccggggacgacgacgccggcggcatggtggtcgtcatgctcgtcgccaagatcaccatggccgtcgtgtcgatgttcgtgctccaggccctcacctcacccatcgtccccctcgccgccgacgtcgacgacggccactgcacccttggccgcgccgccgccgtcccggtccccgagctccagccatggcgagaatccctctccgtgatcaccgaccggttcccgaggcggccgggcgtcgccgagcacgagagggtggccatggtggtgaagtccatgatgatcaacaccaagatggaaggagaagaagagaccaaaaatggcaaacaagaacaagaagatgaccatgttgagcttctaagaacaagatcaggtgagctcagggaaggtgtggagatgtttgattgtgttttggatgaagtgtttgatgaggtgatcaagggcaggaatgagatgcttggcatcttcagagataaggccctcacactgggctgaatttttagatgttagctaatctctgaaaagttaattgaccttgagcaatctggaaaccagcagggtatgtatgtaacctggggtggatgctaatttgactgatcaatttgagttgttttgttgagggtttagagcttcttgcaatgtgtgagtatgtgtttatgaaggtgtttaattatatttggtttccttttatactttaatttctcctttggtttgtaacttgtttcagtgtgacatactgatcaataaagcatctgaagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0198200, RefSeq:Os11g0198200