BGIOSGA034284

From RiceWiki
Revision as of 08:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034284| Description = Ubiquinone biosynthesis protein ubib| Definition = Oryza sativa Indica Group BGIOSGA034284, complete gene.| tag = OS1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034284

Description

Ubiquinone biosynthesis protein ubib

Definition

Oryza sativa Indica Group BGIOSGA034284, complete gene.

LocusTag

OS11G0216300

Ensembl Transcript ID

BGIOSGA034284-TA

Ensembl Protein ID

BGIOSGA034284-PA

Length

4626

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5558556..5563181

Sequence Coding Region

5563103..5563181,5562500..5562822),complement(5562211..5562417,5561999..5562088),complement(5561746..5561892
,5561202..5561366),complement(5560826..5560966,5560552..5560731),complement(5560085..5560280
,5559650..5559777),complement(5559487..5559558,5559112..5559224),complement(5558888..5559035
,5558708..5558777),complement(5558556..5558626

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5558556..5563181 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5558556..5563181 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTGGTGGAAGTGGGCGAGCTCGACGGCGAGCTGGGCTGCATTAGGTGGTGGGCAGCGCGGCGGCGCCCATGGGTATACAGTTTACCGTCCCTTGAGCATGGAGCTCTGCACCTCTTCTGTATCAGGTTCGGTACAATGGTCTCGTATATCAGCATTTGACTATCGAACTCGGTCCCATGGATACGCGAGTTCAAGTTCCTGGGTTTCTCAAAGGAGGAGAAAAACATCCTTTTATGTCATGAATGCTGCGTCGACTGGTGCTCTGCCCCCTACAAAGAAGCTAATCCCACGAACTAATGTCAGAAACATATCCGGTGATAAGCCCAGCAGTGCACTGGAGCAACTTGATATAGAACGTGGCGTCTGTATCCCTTTCCGGAAGTACACTCCAGAGATGGTCAGAAATAGAGTCTTGGGATCAAGAGGTTCTGTGCTGTCCCTCGCTAGTCGAGGCGTGGAGATAATTTGGAAACTTGGCCTTTACTGGTCAGCTCTAATGTATGACTTCTTGGTTGGGCGAGATGAAGAGATTGTTCCATTCCGTGCCCGCCAGCTCCGCAATCTTCTGTGTGATTTGGGCCCTTCATTCATTAAAGCAGGACAGGTTTTAGCCAACAGGCCTGATATTATTCGAGAGGATTATATGAATGAACTCTGTATCTTGCAAGATGATGTTCCTCCATTTCCTAACCAGGTAGCTTTTTCCATAATTGAGGAGGAACTTGGACAGCCATTAGAGAGATTGTTCAGCAGAATCTCATCACGGACAATAGCAGCTGCAAGCTTAGGCCAAGTTTACCGTGCTACACTTAGAGAAACTGGCGAGGATGTTGCTATTAAGGTTCAGAGGCCAGGAATTGAGCCCATCATATATCGAGATCTTTTCCTGTTCCGAACTCTCGCATCCTTTTTGAATGGAATTAGCCTTCAAAAACTAGGCTGCAATGCAGAGCTTATTGTGGATGAATTCGGTGAAAAACTTTTGGAAGAACTTGATTACACCCTTGAAGCTACAAACATCGAGGACTTCTTGGAAAATTTCAAGGATGATCCAACTGTCAAGATCCCTCAAGTATATAAGCAGTATTCAGGTTCTCGTGTTTTAGTAATGGAATGGATAGATGGAATCAGATGCACTGACCCACAGGCTATAAAAGAAGCAGGTATTGATGTGGAGGGCTTTCTCACAGTTGGAGTAAGTGCTGCATTGCGTCAGTTGCTTGAATTTGGCCTTTTCCATGGAGATCCACATCCTGGAAATATCTTTGCGATGCGTGATGGTCGTATTGCTTATGTTGACTTTGGCAATGTGGCTGTCCTAAGTCAGCAAAACAAACAAATCCTAATCGATGCTGTTGTTCATGCTGTAAATGAAGACTATGCTGAAATGGCAAATGACTTCACAAGGCTTGGCTTTCTTGCTAGTGGAACAGATGTGTCCCCAATTGTCCCAGCTCTGGAAGCTATTTGGCAAAACTCAGCCGGGAAAGGCTTAGCAGACTTCAATTTCCGGAGTGTAACCGGGAAGTTTAATCAGCTTGTGTACAATTACCCCATCCGCATCCCAGAAAGGTTTTCTTTGGTTATTCGTTCATTGTTGACACAAGAAGGGATTTGCTTCACTCTGCAGCCTGATTTTAAGTTTCTTGAGGTTGCATATCCATATGTAGCAAAGCGTCTCTTGACAGATCCGAACCCTGCTCTCCGTGAACGGCTGATACAGGTATTATTCAAAGATGGTCTGTTCCAATGGAAACGGCTAGAAAACCTTATAGTTCTTGCCAAGGAAAACGTGTCCAAGATGAGCAGCAATCCTGCACTAAAAAAGAATAGCTCGCAAATTGAGAGAAATCGACAAATGGAGAAGAAATTAGATCTCACCGACACAATAAAAGACGGAGCACGTTTGTTCCTTATCGACGCTGGCATCAGGAGACAACTTATTATGGCTTTCACTGAGGACTCCAAGTTGCATGTAGAAGAGCTTGTTGATGTGTACAGACTGGTCGAAGATCAAATCGACATTCCATCAGTTGCTCTCGAGGTTATCCAAGATTTACCATCCGTCGCGCGCGATTTCATGCTTTCTTGGAGCGATTCCATCCTGTCAGATCGGCAATACTGA</cdnaseq>

Protein Sequence

<aaseq>MAWWKWASSTASWAALGGGQRGGAHGYTVYRPLSMELCTSSVSGSVQWSRISAFDYRTRSHGYASSSSWVSQRRRKTSFYVMNAASTGALPPTKKLIPRTNVRNISGDKPSSALEQLDIERGVCIPFRKYTPEMVRNRVLGSRGSVLSLASRGVEIIWKLGLYWSALMYDFLVGRDEEIVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNQVAFSIIEEELGQPLERLFSRISSRTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISLQKLGCNAELIVDEFGEKLLEELDYTLEATNIEDFLENFKDDPTVKIPQVYKQYSGSRVLVMEWIDGIRCTDPQAIKEAGIDVEGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLASGTDVSPIVPALEAIWQNSAGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLQPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVSKMSSNPALKKNSSQIERNRQMEKKLDLTDTIKDGARLFLIDAGIRRQLIMAFTEDSKLHVEELVDVYRLVEDQIDIPSVALEVIQDLPSVARDFMLSWSDSILSDRQY</aaseq>

Gene Sequence

<dnaseqindica>1..79#360..682#765..971#1094..1183#1290..1436#1816..1980#2216..2356#2451..2630#2902..3097#3405..3532#3624..3695#3958..4070#4147..4294#4405..4474#4556..4626#ATGGCGTGGTGGAAGTGGGCGAGCTCGACGGCGAGCTGGGCTGCATTAGGTGGTGGGCAGCGCGGCGGCGCCCATGGGTGTAGGTTATCACGCTCGGATGCTCTGACAAGACGCCTCCAAGAACTCAATTTGTGGTTCTGAACTTCTCTGAAAAAAGAAGTCTGTTGGTTGTAAATTGGGAAGGGCAATTCATGTTGAATAACAGCAAATAGGGGTGAGCTCAGGGAGTGATAATTAGTGATTTGCTTTTCTCCTCAATTGAATTTTAGGAAGTATGGTTATAGTGTTTTCTGTAGTTAGGGATTGGACATTGGAGATTATATTTCAAGTGTGATGATGTAGCTTGTTATTTTGTCCAGATACAGTTTACCGTCCCTTGAGCATGGAGCTCTGCACCTCTTCTGTATCAGGTTCGGTACAATGGTCTCGTATATCAGCATTTGACTATCGAACTCGGTCCCATGGATACGCGAGTTCAAGTTCCTGGGTTTCTCAAAGGAGGAGAAAAACATCCTTTTATGTCATGAATGCTGCGTCGACTGGTGCTCTGCCCCCTACAAAGAAGCTAATCCCACGAACTAATGTCAGAAACATATCCGGTGATAAGCCCAGCAGTGCACTGGAGCAACTTGATATAGAACGTGGCGTCTGTATCCCTTTCCGGAAGTACACTCCAGAGATGGTATTGAACACTTCAAATGGTTATATTTACAGGGTTAGTTTTCTGAAATCCGTTGTAAATATGCTCATTTCCAAATTGCTAGGTCAGAAATAGAGTCTTGGGATCAAGAGGTTCTGTGCTGTCCCTCGCTAGTCGAGGCGTGGAGATAATTTGGAAACTTGGCCTTTACTGGTCAGCTCTAATGTATGACTTCTTGGTTGGGCGAGATGAAGAGATTGTTCCATTCCGTGCCCGCCAGCTCCGCAATCTTCTGTGTGATTTGGGCCCTTCATTCATTAAAGCAGGACAGGTTATATTCTTCTCTTTCTGATAAATCCCTAAATCTCCCAAGACGATAACACTCCAAATATCTCTGCTGCTTCCTTTGTATATTACAGTCCTTAATGCATTTGGTCCCATTGTTTTTGTTAGGTTTTAGCCAACAGGCCTGATATTATTCGAGAGGATTATATGAATGAACTCTGTATCTTGCAAGATGATGTTCCTCCATTTCCTAACCAGGTACATGTGTACTGTAAAAATTCCATGCATGTTTGTGGAAGATTATACTTACTAGGACTGCGGAGGCATCAGGATGATTAACTTCGCTTATTGATCGAATTGACAGGTAGCTTTTTCCATAATTGAGGAGGAACTTGGACAGCCATTAGAGAGATTGTTCAGCAGAATCTCATCACGGACAATAGCAGCTGCAAGCTTAGGCCAAGTTTACCGTGCTACACTTAGAGAAACTGGCGAGGATGTTGCTATTAAGGTTCATGTTTGCTTCATTTTCTTGTATTTGTTTACTACTTTAGTACTTTATTTCTTTTGTGATTTGAGATGATCGAAAAGTTCTATGACTTGATGCTTCATTTTTACCATGGTCCTCTATCTCTATCATGGCCCATGGATGAGTACAAGCGTGTTTTCTCACCCTAATGAAATTCGTGACCATTTTACACCTTATGAGTTGTGAAAAAGAATTTAGTTAAATGTTTATACATGCTTAGTAGAATGACCAGTCGCCGACTCTATCAGTGGTGTCTTGGACTAGTAGTTTGTGACATTTTTAATGTTTGTTCTTGTACTCATGCATAATATAATGTTTATTGTTGTGCTTATTTATTGATTACTGTGATTCAAAATAACAGGTTCAGAGGCCAGGAATTGAGCCCATCATATATCGAGATCTTTTCCTGTTCCGAACTCTCGCATCCTTTTTGAATGGAATTAGCCTTCAAAAACTAGGCTGCAATGCAGAGCTTATTGTGGATGAATTCGGTGAAAAACTTTTGGAAGAACTTGATTACACCCTTGTAAGCTTTTTGTTCCTTTTTATTGGTGTTATCATGTTCCCAACATAATGAATTAGCTATTGGACAGTAGGTATCACAATCTTACATGTGTTGTCAATGGTGTCCACTTTCTTTTGTTGGGAAGACAGTACCGGAAAAGAGAAAACAATTTCATTGACAAACTCTTATATCTCTCATGGCTTATTTTGTCATGGATGGAATGTTGACGTGCTTTCTATTCCATACAATGCTTTAGGAAGCTACAAACATCGAGGACTTCTTGGAAAATTTCAAGGATGATCCAACTGTCAAGATCCCTCAAGTATATAAGCAGTATTCAGGTTCTCGTGTTTTAGTAATGGAATGGATAGATGGAATCAGATGCACTGACCCACAGGTTTGTAGCATTATTTCTAGTTTTTTTTATCAAAGGTGAAATAGTTCAGTGTAATTTTTCTCGTGTTTTTGAGTCCAAAAGTTTATTTGTACAGGCTATAAAAGAAGCAGGTATTGATGTGGAGGGCTTTCTCACAGTTGGAGTAAGTGCTGCATTGCGTCAGTTGCTTGAATTTGGCCTTTTCCATGGAGATCCACATCCTGGAAATATCTTTGCGATGCGTGATGGTCGTATTGCTTATGTTGACTTTGGCAATGTGGCTGTCCTAAGTCAGGTATGAAATATTGCTTTTTAGCAGTGGTAAAATTCATCTTTGAATTTTTCAGTTAATTGGATTAGTAATATTTTTTGTCAATACTCAATTTGATAAATAATATCTGATTCATGCCTACTATGAAAAAAAATCGATTCTATAGTAAATAATGTACATTGGTCATTTACAGTCCTGCAATCTGTTAAAACTGCAGAAATATATCTTATCAGGCCTGTTGGCTAAAACAGAAATTGGCTAACAGGTTGTTCTGCTATTGTTTTCCTATGTGCAGCAAAACAAACAAATCCTAATCGATGCTGTTGTTCATGCTGTAAATGAAGACTATGCTGAAATGGCAAATGACTTCACAAGGCTTGGCTTTCTTGCTAGTGGAACAGATGTGTCCCCAATTGTCCCAGCTCTGGAAGCTATTTGGCAAAACTCAGCCGGGAAAGGCTTAGCAGACTTCAATTTCCGGAGTGTAACCGGTAAGGCTGTAATGCTTCGCAGTTTATCTATTGCCGAGAACTGGATGTGTGCTTGCTTTGTTCTTCATGATCTATATCAGCATTTTTTTTCAATGCATGGTCATCAAATTATATTTCTGCTGAAGGTGGACATTTCTGATCATGATTCATGGATATTATTTTGATGGCATTCCTTGTGGCACCCACACTTGTTAGAATGTTTGCTTGATTATTTTTGTTCTATTAATCATGAGTGCTTAGGATAAGACTGCTTTCTATATTCATATATATTTCATCCTCTAATTTATATTTATAACCAAATTTATAGGGAAGTTTAATCAGCTTGTGTACAATTACCCCATCCGCATCCCAGAAAGGTTTTCTTTGGTTATTCGTTCATTGTTGACACAAGAAGGGATTTGCTTCACTCTGCAGCCTGATTTTAAGTTTCTTGAGGTGTGACATGTGCCATTCTTTTCAGTTCTCAAGAAAGAAAAAAAAATGTGTGATCAGTTCTCACCGTTCACTGTGCTGTTTCAATATCCAGGTTGCATATCCATATGTAGCAAAGCGTCTCTTGACAGATCCGAACCCTGCTCTCCGTGAACGGCTGATACAGGTAACCAGTCAAGGCCTCCTTAACACTACTGCAAAGCTATTGTCCATTGGTAGTTTCTACCATATGATCCACCATTGTATATGTGAAAGTGTGGAATAAAGCATCAGTGCAGAAAATAAACAGCAAGTTTGTTCTGTCAAACTGCAGGAAAGAAGCATGTTTTAGCATTTAAATGGTTGACAATTGTGTGACATGCCATTATTTATTTTTAAAAAAGACTTTTACCACTTATGTCGTCACCATGTTTTTTTTCCCTATGAAGGTATTATTCAAAGATGGTCTGTTCCAATGGAAACGGCTAGAAAACCTTATAGTTCTTGCCAAGGAAAACGTGTCCAAGATGAGCAGCAATCCTGCACTAAAAAAGAATAGCTCGTGAGTATCAGAACTGTCTGTTCTATAACGCTCTAAATCTTATTTCTAGAAATATTCTGATCTTGTGAACCACTAGGCAAATTGAGAGAAATCGACAAATGGAGAAGAAATTAGATCTCACCGACACAATAAAAGACGGAGCACGTTTGTTCCTTATCGACGCTGGCATCAGGAGACAACTTATTATGGCTTTCACTGAGGACTCCAAGTTGCATGTAGAAGAGGTACTTTAACATGGATTGTTCACTACAATATTCACACAAGTTGTATACTAAGGAGAGATGGAAGATAATTTTTCCAGTGGATTACTGTAACCCATTTCTCTCTTTTGCAGCTTGTTGATGTGTACAGACTGGTCGAAGATCAAATCGACATTCCATCAGTTGCTCTCGAGGTTATCCAAGGTAAGTCAGTCGACCTATGTTAGTTGGAAAAACTCTCCTGTTCTTCCATTTGGAATGCATTTACTTTACTTTTCTGTGCAGATTTACCATCCGTCGCGCGCGATTTCATGCTTTCTTGGAGCGATTCCATCCTGTCAGATCGGCAATACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034284

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034284&oldid=36260"