BGIOSGA034288

From RiceWiki
Revision as of 08:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034288| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034288, complete gene.| tag = OsI_355...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034288

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034288, complete gene.

LocusTag

OsI_35533

Ensembl Transcript ID

BGIOSGA034288-TA

Ensembl Protein ID

BGIOSGA034288-PA

Length

3374

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5513644..5517017

Sequence Coding Region

5516941..5517017,5516719..5516857),complement(5516201..5516668,5516010..5516098),complement(5515746..5515810
,5515542..5515597),complement(5515009..5515129,5514842..5514916),complement(5514440..5514493
,5514262..5514356),complement(5514008..5514182,5513644..5513891

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5513644..5517017 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5513644..5517017 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGGCGGCTGATGGTGATCACTGCCGCCTCCCCGACGACTCCCTCTTCCTCGGCTTCGATTGCTCCACGCAGTCGCTGAAAGCCACGGTGCTGGACGCCGGCCTCACCGCCGTCGCCCACGACGCCGTCCACTTCGACTCCGACCTGCCGCACTACGCCACCCATGGCGGCGTCCTCCGGGACCCATCCGGCGGCGACCCGGGCCGCGTCGCTCGCGCCCAGGTGGACTACGCCCGCGTCGCCGCCGTCTCCGGCGGCGCGCAGCAGCACGGCAGCGTCTACTGGAAGCGCGGCGCGGCGGCGGTGCTCGCGTCCCTCGACCCGGCCAGGGGCCTGGCACCGCAGCTCGCCGCGGCGCTCGCCACGACGGAGTCGCCGGTGTGGATGGACAGCAGCACGGCGGCGCAGTGCCGGGAGGTGGAGGCGGCGGTCGGCGGCGCGCTGGAGCTGGCCAGGATGACCGGGTGCCGCGCGCACGAGCGGTGCACAGGCCCGCAGATCAGGAAGATGTACCAGGCGAGGCGGCGCGTGTACGACGACACCGAGAGGATCTCGCTCGTGAGCTCGTTCATGGCGTCGCTGCTCGTCGGCGGCTACGCCTGCATCGACGAGACCGACGGCGCGGGGATGAACTTGATGGACATCACCACGCGCGAGTTGCGCAGGGACGCCCTTGAGGCTACTGCTCCTGATTTAGAAGACAAGATTGGGAAGCTAGCACCGGCGCATGCTGTTGCAGGAACTTTATCTCCTTATTTCGTTCAGAGATTTCAGTTTTCAAGCAACTGTCTAGTTGTTCAGTGGTCAGGGGACAACCCCAACAGCCTTGCAGGTTTAACTTTGAGCGATCCTGGTGATCTAGCAATCAGTCTTGGGACAAGTGATACAGTTTTTGGGATAACTGATTTACCTGAACCATCCCTGGATGGGAACATCCTCCCTAACCCAGTGGACCCCAAGACATATATGGTTATGCTTTGCTACAAAAATGGCTCTCTAACACGGGAAGATGTCCGCAATCGTTATGCTGACGGGTCATGGGATGTGTTCAACAAGCATTTGGAGAATACAGCTCCTTTAAATGGAGGAAAATTGGGATATTACTACAATGAGCCTGAGATTCTGCCACCACTTCCAGTTGGGTTTCACCGTTACGTTGTCAGCTCCTCAGCCAGTGGATCTTTAGATGAGATGGTGGAGCATCAGATAAACCAGTTTGATCCTCCTTCAGAAGTCCGTGCAATAATAGAAGGGCAGTTCCTGTCCATGAGGGGCCAAGCTGAAAGGTGTGGTCTGCCAGTGCCTCCAAAGCGGATTATAGCGACCGGTGGAGCATCGTCGAACCAGATCATTCTCAAGACGATGGCATCCATTTTTGGCTGCTCGGTTTACACCGTCCAAAGACCAGACTCTGCCTCACTGGGTGCTGCTCTTAGAGCAGCCCATGGGTGGATTTGCAACCAGAAAGGCAAGTTTGTGCCTGTTTCATGTCTGCACTCGGACAGACTGAATAGAACATCACTAAGCATTAAGCTGGCTGCTCCATTTGGAGACTCGGAGGAGGACATTGACCTTCTGAACAACTACACGTTGTTGATGAAGAAAAGGCTGGAGATTGAACAGAAGCTTGTCGAGAAGTTTGGTCGACATTCATGA</cdnaseq>

Protein Sequence

<aaseq>MAMAADGDHCRLPDDSLFLGFDCSTQSLKATVLDAGLTAVAHDAVHFDSDLPHYATHGGVLRDPSGGDPGRVARAQVDYARVAAVSGGAQQHGSVYWKRGAAAVLASLDPARGLAPQLAAALATTESPVWMDSSTAAQCREVEAAVGGALELARMTGCRAHERCTGPQIRKMYQARRRVYDDTERISLVSSFMASLLVGGYACIDETDGAGMNLMDITTRELRRDALEATAPDLEDKIGKLAPAHAVAGTLSPYFVQRFQFSSNCLVVQWSGDNPNSLAGLTLSDPGDLAISLGTSDTVFGITDLPEPSLDGNILPNPVDPKTYMVMLCYKNGSLTREDVRNRYADGSWDVFNKHLENTAPLNGGKLGYYYNEPEILPPLPVGFHRYVVSSSASGSLDEMVEHQINQFDPPSEVRAIIEGQFLSMRGQAERCGLPVPPKRIIATGGASSNQIILKTMASIFGCSVYTVQRPDSASLGAALRAAHGWICNQKGKFVPVSCLHSDRLNRTSLSIKLAAPFGDSEEDIDLLNNYTLLMKKRLEIEQKLVEKFGRHS</aaseq>

Gene Sequence

<dnaseqindica>1..77#161..299#350..817#920..1008#1208..1272#1421..1476#1889..2009#2102..2176#2525..2578#2662..2756#2836..3010#3127..3374#ATGGCCATGGCGGCTGATGGTGATCACTGCCGCCTCCCCGACGACTCCCTCTTCCTCGGCTTCGATTGCTCCACGCAGTAACCAATTTACTCCCAACCAAATCTAATCCTAATCCTGTGCTTGCTAATGCTAATTCTAGTTCTAATGCTAATGGTGGTAGGTCGCTGAAAGCCACGGTGCTGGACGCCGGCCTCACCGCCGTCGCCCACGACGCCGTCCACTTCGACTCCGACCTGCCGCACTACGCCACCCATGGCGGCGTCCTCCGGGACCCATCCGGCGGCGACCCGGGCCGCGTCGTGTCGCCGCCGCTCATGTGGGCCGAGGCGCTGGACCTGCTGCTCGCCAGGCTCGCGCCCAGGTGGACTACGCCCGCGTCGCCGCCGTCTCCGGCGGCGCGCAGCAGCACGGCAGCGTCTACTGGAAGCGCGGCGCGGCGGCGGTGCTCGCGTCCCTCGACCCGGCCAGGGGCCTGGCACCGCAGCTCGCCGCGGCGCTCGCCACGACGGAGTCGCCGGTGTGGATGGACAGCAGCACGGCGGCGCAGTGCCGGGAGGTGGAGGCGGCGGTCGGCGGCGCGCTGGAGCTGGCCAGGATGACCGGGTGCCGCGCGCACGAGCGGTGCACAGGCCCGCAGATCAGGAAGATGTACCAGGCGAGGCGGCGCGTGTACGACGACACCGAGAGGATCTCGCTCGTGAGCTCGTTCATGGCGTCGCTGCTCGTCGGCGGCTACGCCTGCATCGACGAGACCGACGGCGCGGGGATGAACTTGATGGACATCACCACGCGCGAGTTGCGCAGGGACGCCCTTGAGGTTTGCTGCTTGCAACAACACACATTTTCAGACTGAGAAATGCAATCTTTTTTTTTGTTTTTGGCAACTGCTTCTGATGCATTTCAATTTACAAGTTTGTAGGCTACTGCTCCTGATTTAGAAGACAAGATTGGGAAGCTAGCACCGGCGCATGCTGTTGCAGGAACTTTATCTCCTTATTTCGTTCAGAGGTAGCCATTGATCAATCTGTTTTCCTCCCCTTTTACAGTGTCTGCTAAACTGGTGTTTGAAAAAGGAGGTATGTTATAGTGAACAACATCATCAAACTACAAGATTGAATTATTATATGTATAAACTAACTTCAGACACTTTTGCATTGGGGTCTGACTCGACGAATTACTGATATGAATATGCTTCATTTTTCATCAGATTTCAGTTTTCAAGCAACTGTCTAGTTGTTCAGTGGTCAGGGGACAACCCCAACAGCCTTGCAGGTATATAAGTTCTCCCAATTTTCCTACTAATATCTTACAACATATGGCATGTCTGTTTGGTCAAATCAAAAGATGATCTGATTCAAAGCATATGCCAGAAACTTTGGTCAAAAGAATATTTTCGGATCACTCCTATGTGATTATGCAGGTTTAACTTTGAGCGATCCTGGTGATCTAGCAATCAGTCTTGGGACAAGTGATACAGTAATCATCTATCACCTTGTTTTTACAAAATCTGCTCCATTTGTTTTCAAGGGCAATGGTACCAACAATGTCTGGGAACAGATACATTAGAACCTAGTTCTTATCTACCAATAAGGCAATAACACTAACTGCTGATTGAACCTTGTTTTACTTGTACTTACACTGAATACAGGATTCACAAATAAAAAACAACTCACAACACAAAGTTGTTCTGTACATCTATGAACCATCGGGCCCTGTTTGGCAAATGAGTTATGGGAGGTTGGATTGGGAAACAGAAATAATAAATGAGGCGAAAAGAAAGAATGGCTAGGATTGAATTTTACCCTTTGGTGTGGTGGGAAATCTTTTCCCAAACCCATTTGCCAAACAAGCCCTTGTTGCTTATTCTGATGCCTTTATGGTCCTTCAGGTTTTTGGGATAACTGATTTACCTGAACCATCCCTGGATGGGAACATCCTCCCTAACCCAGTGGACCCCAAGACATATATGGTTATGCTTTGCTACAAAAATGGCTCTCTAACACGGGAAGGTACCATTTGGATTCTTTTTATCTCACTGTTTACCATTACTAATGCCTATATTTTTGTTTTTGAAACTATAAATGCTTATATTTTTCACCAGATGTCCGCAATCGTTATGCTGACGGGTCATGGGATGTGTTCAACAAGCATTTGGAGAATACAGCTCCTTTAAATGGTACACCAATATAGTTATTCTTTCCTTTCTATTTTACTAAAAGGATGCCAGCCCATATATTTCTAGAACAAACAGGCTAGCTGATTGGCACTAGAAATCACAAACAGCATAAGGATATTAAACTCTGTTTTATAAAGCTTGTACATTTTGGCAAGATGATAAGCCAGTATAATTATGCTTTAAATCCCATCAATGTTTTTTTTTGAACTGTAGATCATCCAATTGATGTTTAGCAGTTACTATCACACAGTTGCCTTTCCTCCCATTCATGATAGTTACTTGCGTTGACCACATAAAGGTAGCTTTCCTGAGGATTCTTGAATCCCCCTTTTTCTTTCTTTGTACCAGGAGGAAAATTGGGATATTACTACAATGAGCCTGAGATTCTGCCACCACTTCCAGGTTATTTCTGACCTTACATTTCATTTCCCTTCAACGTGTAGTTTTTATGTCATTACTCATGTGCTATGCTTATAAATCTGTAGTTGGGTTTCACCGTTACGTTGTCAGCTCCTCAGCCAGTGGATCTTTAGATGAGATGGTGGAGCATCAGATAAACCAGTTTGATCCTCCTTCAGAAGTACGGGGACTTCCATAACTGGTCGTTAAACGATCTAATAAACTTTCCTTCAGGCTGTTCACTAACAGTTGTGATATAGGTCCGTGCAATAATAGAAGGGCAGTTCCTGTCCATGAGGGGCCAAGCTGAAAGGTGTGGTCTGCCAGTGCCTCCAAAGCGGATTATAGCGACCGGTGGAGCATCGTCGAACCAGATCATTCTCAAGACGATGGCATCCATTTTTGGCTGCTCGGTTTACACCGTCCAAAGACCAGGTATATATAAGACATGTGCATCACATATGGATTCGAATTAATCTGCTGTTATCATGTTTTCCATCTGGTTGTGAGCATAATTGTGTCCTTTACATAGCAATGCTCAATTGATACAGACTCTGCCTCACTGGGTGCTGCTCTTAGAGCAGCCCATGGGTGGATTTGCAACCAGAAAGGCAAGTTTGTGCCTGTTTCATGTCTGCACTCGGACAGACTGAATAGAACATCACTAAGCATTAAGCTGGCTGCTCCATTTGGAGACTCGGAGGAGGACATTGACCTTCTGAACAACTACACGTTGTTGATGAAGAAAAGGCTGGAGATTGAACAGAAGCTTGTCGAGAAGTTTGGTCGACATTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034288

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034288&oldid=36264"