BGIOSGA034307

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Revision as of 08:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034307| Description = BGIOSGA034307| Definition = Oryza sativa Indica Group BGIOSGA034307, complete gene.| tag = | tid = BGIOSGA034307-TA|...")
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Gene Name

BGIOSGA034307

Description

BGIOSGA034307

Definition

Oryza sativa Indica Group BGIOSGA034307, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA034307-TA

Ensembl Protein ID

BGIOSGA034307-PA

Length

2357

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5303406..5305762

Sequence Coding Region

5305142..5305762,5303406..5304869

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5303406..5305762 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5303406..5305762 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATGATCTGGTCCACGACTTGGCAAGATCAGTCATGTTTGATGAAATACAGAATGATGGTTTGCAAGGAGACACTAGTGGAAGAAATTGCCGCTATGCTTTGCGTACTGAATTTAGCAAGCCATTGGAAACATTAAGGGCACTGCGTTTTATGGGATGCAGCATAGATAATAGACTTCACAATGATTCATTTTCATCTGCTAAGTACCTGCGTCTGTTGGATTTAAGTGAGTGCTCTATACAGAGATTGCCAGATTCTATTGGTCAATTGAAGCAGTTGAGGTATCTTAATGCCACAGGAGTTCAACATGAAACGATTCCTGATGGTATCACCAAGCTCTTGAAACTAATGTATCTTAGTCTTCGGGGATCTTCTGGAATCCAGGCATTGCCAGAATTTATGGGAGAAATGGAGGACTTGATGTATCTTGATTTATCAGATTGTTCAAGAATAATAAGATTGCCAGTGTCATTTGGCAAGCTAACAAAATTGGTTCATCTGGATTTGTCACATTGCACTAGGGTTAGAGGTGTATCGGAATCCTTGGAGAGTCTCACCAATGTTGAATATTTAAATTTATCAAACTGCAAAAATATTGGAGAGCTGCCAGGAGCTTGGGTTAAGGGTATACCAGAAGCCTTGGGTGGACTTACCAACCTCCAAGTTCTAAATTTATCACATTGCTACAACATTTTCGAAAATGACGTGTATATTAGAAGGAAGGTAGAAGCCATTGGTAATCTCAAGAAACTCCAGTATTTGAACTTATCGGACTTGCTTAATAAAAAGTGTCATGACAAATCAACATATGTCAGTTTCTTCGAGTGTATTAATACCCTTTCGAACCTTGAGCACCTTGATTTGTCTCACAACGAATATCTTAGGAGTTTACCTGACTGTTTTGGTAGCCTCAAAAGGCTGCATACACTAGATGTCTCAGGCTGCAGCTTTCTGGACAAGATACCACCAAGCATCCATAACATTGATAACCTGAAGTTTCTGCATGCAGATACTCGCATTTATTTGGGGAAGTCCATGTTTTGTCTATTGAACGAAAGTTCAGTCTCATTGCCGCACTTTGTGGTCCAAGCAAATGCCAATGGCTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTTGAATCTTGAGTGGGCCAAAGATGCTGTGAGGTTTGTGGAGGATATTGAATTGCTAGGAGAGATTATTCCACCAACAAATTTAATGGAGTTTGAGATACATGGTTATAACTGCACCAAGTTTCCAGCATGGCTAATGGGCATTGCTCCTTATCTCCCTAATCTTGTTCCTCTTACCATGATGGATATGCCCTGCTGCATCAGCCTACCACCACTTGGTCAATTACCTAATTTGAAAGAGTTAACTCTTGAAAAAATGAAGAGCGTCACAAAAATTGATGGGGACTTCTGCGGTGGCCGAAGGCCCTTTCCTCGACTGAAGAAATTTGTCATGCGTGATATGGAAAGCCTGCAAGTGTGGAACACAATATACTGCAGTGGTGGGGATGGTGTGAGCGAGTTTATGTTCCCTATACTTCCTGAGTTGAGCATATTTCGGTGCACCAAGCTGAGACTTACACCATGCCCACTAAGAGCCGAGAAATGGAACATTTGGGGAAGTGATGGTGTCATATCCTCATGGGAAGAAAGTGCGGCAGATATCATCGCATCCTGCTCCTCTCCTCTAGTGACTACTTTGAGTATCAACTGCAAGGTTTCTCTTCATGAGTGGAGGTTGCTTCACCACCTCCCGGACCTCAAAGGCTTAATTATCAATGATTGCAATGATTGGACTATCTCAGCAGAGATCATCAGAGCCCTCTCCTCTCTAGAATCATTGACTCTGGAGCGATGGTATAACCAGGCCCAGCTGCCAAATTGGTTGGGTCAGCTCGTGTCTCTTAAGGAATTGAAAATAAACAGGTTCGAGATGAACGAATCACAGGAGGACATCAAACATCTCACGTCGCTACAGAAACTGTCTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MHDLVHDLARSVMFDEIQNDGLQGDTSGRNCRYALRTEFSKPLETLRALRFMGCSIDNRLHNDSFSSAKYLRLLDLSECSIQRLPDSIGQLKQLRYLNATGVQHETIPDGITKLLKLMYLSLRGSSGIQALPEFMGEMEDLMYLDLSDCSRIIRLPVSFGKLTKLVHLDLSHCTRVRGVSESLESLTNVEYLNLSNCKNIGELPGAWVKGIPEALGGLTNLQVLNLSHCYNIFENDVYIRRKVEAIGNLKKLQYLNLSDLLNKKCHDKSTYVSFFECINTLSNLEHLDLSHNEYLRSLPDCFGSLKRLHTLDVSGCSFLDKIPPSIHNIDNLKFLHADTRIYLGKSMFCLLNESSVSLPHFVVQANANGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELNLEWAKDAVRFVEDIELLGEIIPPTNLMEFEIHGYNCTKFPAWLMGIAPYLPNLVPLTMMDMPCCISLPPLGQLPNLKELTLEKMKSVTKIDGDFCGGRRPFPRLKKFVMRDMESLQVWNTIYCSGGDGVSEFMFPILPELSIFRCTKLRLTPCPLRAEKWNIWGSDGVISSWEESAADIIASCSSPLVTTLSINCKVSLHEWRLLHHLPDLKGLIINDCNDWTISAEIIRALSSLESLTLERWYNQAQLPNWLGQLVSLKELKINRFEMNESQEDIKHLTSLQKLSA</aaseq>

Gene Sequence

<dnaseqindica>1..621#894..2357#ATGCATGATCTGGTCCACGACTTGGCAAGATCAGTCATGTTTGATGAAATACAGAATGATGGTTTGCAAGGAGACACTAGTGGAAGAAATTGCCGCTATGCTTTGCGTACTGAATTTAGCAAGCCATTGGAAACATTAAGGGCACTGCGTTTTATGGGATGCAGCATAGATAATAGACTTCACAATGATTCATTTTCATCTGCTAAGTACCTGCGTCTGTTGGATTTAAGTGAGTGCTCTATACAGAGATTGCCAGATTCTATTGGTCAATTGAAGCAGTTGAGGTATCTTAATGCCACAGGAGTTCAACATGAAACGATTCCTGATGGTATCACCAAGCTCTTGAAACTAATGTATCTTAGTCTTCGGGGATCTTCTGGAATCCAGGCATTGCCAGAATTTATGGGAGAAATGGAGGACTTGATGTATCTTGATTTATCAGATTGTTCAAGAATAATAAGATTGCCAGTGTCATTTGGCAAGCTAACAAAATTGGTTCATCTGGATTTGTCACATTGCACTAGGGTTAGAGGTGTATCGGAATCCTTGGAGAGTCTCACCAATGTTGAATATTTAAATTTATCAAACTGCAAAAATATTGGAGAGCTGCCAGGAGCTTGGGTAACCTTAGGAAATTGGAATATTTGAACTTATCAAGCTGCTCATACATTCTTGGGGGGTCGGCAATGGAAGTTTTGGGTAAACTTACCAAACTTGAATACTTGAATCTGTCATCAGAATCTTCTGATATCGAAAGACTACCTGAAGCTTTGTGTAGCTTCAACTATCTTAAGTATTTAAACTTATCAGGTTTCAAGAAATTAGAAAAACTACCAACGTCATTTGGAAATCTCAATAGTTTGATGCATTTTGATTTATCACATTGTCTTCAGGTTAAGGGTATACCAGAAGCCTTGGGTGGACTTACCAACCTCCAAGTTCTAAATTTATCACATTGCTACAACATTTTCGAAAATGACGTGTATATTAGAAGGAAGGTAGAAGCCATTGGTAATCTCAAGAAACTCCAGTATTTGAACTTATCGGACTTGCTTAATAAAAAGTGTCATGACAAATCAACATATGTCAGTTTCTTCGAGTGTATTAATACCCTTTCGAACCTTGAGCACCTTGATTTGTCTCACAACGAATATCTTAGGAGTTTACCTGACTGTTTTGGTAGCCTCAAAAGGCTGCATACACTAGATGTCTCAGGCTGCAGCTTTCTGGACAAGATACCACCAAGCATCCATAACATTGATAACCTGAAGTTTCTGCATGCAGATACTCGCATTTATTTGGGGAAGTCCATGTTTTGTCTATTGAACGAAAGTTCAGTCTCATTGCCGCACTTTGTGGTCCAAGCAAATGCCAATGGCTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTTGAATCTTGAGTGGGCCAAAGATGCTGTGAGGTTTGTGGAGGATATTGAATTGCTAGGAGAGATTATTCCACCAACAAATTTAATGGAGTTTGAGATACATGGTTATAACTGCACCAAGTTTCCAGCATGGCTAATGGGCATTGCTCCTTATCTCCCTAATCTTGTTCCTCTTACCATGATGGATATGCCCTGCTGCATCAGCCTACCACCACTTGGTCAATTACCTAATTTGAAAGAGTTAACTCTTGAAAAAATGAAGAGCGTCACAAAAATTGATGGGGACTTCTGCGGTGGCCGAAGGCCCTTTCCTCGACTGAAGAAATTTGTCATGCGTGATATGGAAAGCCTGCAAGTGTGGAACACAATATACTGCAGTGGTGGGGATGGTGTGAGCGAGTTTATGTTCCCTATACTTCCTGAGTTGAGCATATTTCGGTGCACCAAGCTGAGACTTACACCATGCCCACTAAGAGCCGAGAAATGGAACATTTGGGGAAGTGATGGTGTCATATCCTCATGGGAAGAAAGTGCGGCAGATATCATCGCATCCTGCTCCTCTCCTCTAGTGACTACTTTGAGTATCAACTGCAAGGTTTCTCTTCATGAGTGGAGGTTGCTTCACCACCTCCCGGACCTCAAAGGCTTAATTATCAATGATTGCAATGATTGGACTATCTCAGCAGAGATCATCAGAGCCCTCTCCTCTCTAGAATCATTGACTCTGGAGCGATGGTATAACCAGGCCCAGCTGCCAAATTGGTTGGGTCAGCTCGTGTCTCTTAAGGAATTGAAAATAAACAGGTTCGAGATGAACGAATCACAGGAGGACATCAAACATCTCACGTCGCTACAGAAACTGTCTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034307

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034307&oldid=36283"