BGIOSGA034312

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Revision as of 08:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034312| Description = Alcohol dehydrogenase 1Alcohol dehydrogenase| Definition = Oryza sativa Indica Group BGIOSGA034312, complete gene.| t...")
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Gene Name

BGIOSGA034312

Description

Alcohol dehydrogenase 1Alcohol dehydrogenase

Definition

Oryza sativa Indica Group BGIOSGA034312, complete gene.

LocusTag

ADH1

Ensembl Transcript ID

BGIOSGA034312-TA

Ensembl Protein ID

BGIOSGA034312-PA

Length

2894

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5224733..5227626

Sequence Coding Region

5227593..5227626,5227197..5227333),complement(5227053..5227099,5225895..5226220),complement(5225727..5225809
,5225572..5225647),complement(5225429..5225490,5225253..5225348),complement(5225009..5225170
,5224733..5224849

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5224733..5227626 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5224733..5227626 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACGCTTTTCCATCAACGGGAAGCCCATTTACCATTTCGTCGGGACTTCGACCTTCAGCGAGTACACTGTCATGCATGTTGGTTGCGTTGCGAAGATCAACCCGGCAGCTCCACTTGATAAAGTTTGCGTTCTTAGCTGTGGTATTTCTACTGGTCTTGGTGCTACAATCAATGTGGCAAAGCCACCAAAGGGTTCGACGGTGGCGATATTTGGTCTAGGAGCTGTAGGCCTTGCTGCCGCAGAAGGTGCAAGGATTGCAGGAGCGTCAAGGATCATTGGCATTGACCTGAACGCCAACAGATTTGAAGAAGCTAGGAAATTTGGTTGCACTGAATTTGTGAACCCAAAGGACCATGACAAGCCAGTTCAGCAGGTACTTGCTGAGATGACCAATGGCGGAGTTGACCGCAGCGTTGAATGCACTGGCAACATCAACGCCATGATCCAAGCATTTGAATGTGTTCATGATGGCTGGGGTGTTGCTGTTCTGGTCGGCGTGCCACACAAGGACGCCGAGTTCAAGACCCACCCGATGAACTTCCTGAACGAGAGGACTCTCAAGGGAACCTTCTTCGGCAACTACAAGCCGCGCACCGATCTGCCCAACGTCGTCGAGCTCTACATGAAGAAGGAGCTGGAGGTGGAGAAGTTCATCACACACAGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGACCTGATGCACAAGGGCGAGGGCATCCGCTGCATCATCCGCATGGAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRMEN</aaseq>

Gene Sequence

<dnaseqindica>1..34#294..430#528..574#1407..1732#1818..1900#1980..2055#2137..2198#2279..2374#2457..2618#2778..2894#ATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGGTCAGTGCTTTTCCTCCCCTCCCTGTTTCTTCTTGGTTCGATTTTGCTTTGGATTGGGCGAACTTTTAGGCATTTTATTACTGGAGCGGCGCTGTAGATGAAATTCTTGGATTGTGTTCTTTTTAGAGTTTTCTTGGGTGAACATTACCGATCTTGCAGAAGCTGTGGAGAAAAGCATATCTTTTTTTTTAGTGAAAAATGTCATTCAGGATTATGTTTTTTTGGTGGATTGGTGGGTGATTTTGCTGGATCTGTGCAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGTATCTACTCACCTCCTCTTCTTCAGTTCCTATCCATCCATAGCTGCTCCAATGTGTGGTTGACTTGCGCCTCTTGTGTGGCTTCTGAATCTCTTAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGGTATGTGCTTTTATGCATCTTCTTCCTTGATTTTGTTTCTTGTTAATACTTGGTTGCTCTGATGCATGCTTTTGTTGCTGATGTGTGATGTGGCATGCTGTTAGTTAATTGATTTGTTGTTACTACCTGGTTACTCCACTGTTGTGGTTGCTAGTGTGGCCTGTTGTTAATTAATTGATTCTTTGTTAGTACTACTTGGTTACTCTGCTGCTCTGGTTGCTGGTGTGTTGTGTTGTTAATTAATTGGCTCGTTGTTACTTCTTGGTTTACTCTACTGCTCTGGTTGCTGATGTGGCATGTTGTTAAGTACTTAAAACTATGCTTTGTGGTTGAATCTTCCTCTAATTGCAGTTTAGGGGGGGGGGGGGTCATTGTTTATTGGCTTGGCATTAGTAGAACATTTGGCTGAGGTAATCTGGACAACATGGGAAAGAATCATATGGGCACATGCTGTTGCCTGTGTCAAACATTATAAATGTGTGCTATTTTTGTGGGTCTTCAGTTGGATCTTGATAGATTTATCAATTTATAACTTATTACAAGGAAGAAACTTTTTCTTTCAGTTAGTAGTTGGTAGTTTATTTTTGAAGTTGGCAGATTTATTTGTGATAGGCGTTGATTGACCCTTTAGAAGACTTCTATTCAATAAGTTTGTATTTTCCAGTTGACAAAGGGCATATAAATTAGGCATTGCTTGACCTTTATGCTACCTAACATATTCATGGCACCCTTTCTATTTTCTGAAATACAGCGTGGATTATTTTTTTTAACACTTCCATTGAGTAAAAGATTCCTATTGTTCATATCTGCTGAAATTTATTCATTTCTGCAGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACGCTTTTCCATCAACGGGAAGCCCATTTACCATTTCGTCGGGACTTCGACCTTCAGCGAGTACACTGTCATGCATGTTGGTTGCGTTGCGAAGATCAACCCGGCAGCTCCACTTGATAAAGTTTGCGTTCTTAGCTGTGGTATTTCTACTGGTAAGCAGAATTTTTTTTGTTTCTTGCATTCTTCTTACTTGATAGAATGTAAGTTGAGATGCTGAGTCGCAATTTCCTTTTGTAGGTCTTGGTGCTACAATCAATGTGGCAAAGCCACCAAAGGGTTCGACGGTGGCGATATTTGGTCTAGGAGCTGTAGGCCTTGCTGTGAGTGTCTGAACTCACCTTGAATGTTCTCAATTACAATGAGAGATCCATCTAATTACTCTACATATTGTCTGATTAGGCCGCAGAAGGTGCAAGGATTGCAGGAGCGTCAAGGATCATTGGCATTGACCTGAACGCCAACAGATTTGAAGAAGGTAAAATCCTCTTGATTTACCAGATCATCAGTTTGTTTGATGGTCTTTTAAAGTCATCTTATATATTTTGTATATCTTCAGCTAGGAAATTTGGTTGCACTGAATTTGTGAACCCAAAGGACCATGACAAGCCAGTTCAGCAGGTATGTATGTTCCCTTACATCAGGAAAAGGAAAATCTGTATCACTTGATTGTACTGATACAGTGTGTTATGGTAATTTAGGTACTTGCTGAGATGACCAATGGCGGAGTTGACCGCAGCGTTGAATGCACTGGCAACATCAACGCCATGATCCAAGCATTTGAATGTGTTCATGATGTAAGATCTGAAAACAGCATATTGTCCACTTAATACAGTTAATTCGACAAGATGCTAAATATATTATATGTTCTGAATCCAGGGCTGGGGTGTTGCTGTTCTGGTCGGCGTGCCACACAAGGACGCCGAGTTCAAGACCCACCCGATGAACTTCCTGAACGAGAGGACTCTCAAGGGAACCTTCTTCGGCAACTACAAGCCGCGCACCGATCTGCCCAACGTCGTCGAGCTCTACATGAAGAAGGTGAATACAAATCGCGAATCCTTCCTTTCGCTTTATCCAACTATTACAAACTAAGAGTAGTCGCAAAATCTTCAAATGTTCATCGACCTCAATCAAGAACTTCTGAAAGTTGGGTGTGTCCATGCTCTTATATGCATACCTCCGCTGTTGTGAATTCAGGAGCTGGAGGTGGAGAAGTTCATCACACACAGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGACCTGATGCACAAGGGCGAGGGCATCCGCTGCATCATCCGCATGGAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034312