BGIOSGA034322

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Revision as of 08:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034322| Description = F-box family-3| Definition = Oryza sativa Indica Group BGIOSGA034322, complete gene.| tag = OSI9Ba083O10_092B13-12| ...")
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Gene Name

BGIOSGA034322

Description

F-box family-3

Definition

Oryza sativa Indica Group BGIOSGA034322, complete gene.

LocusTag

OSI9Ba083O10_092B13-12

Ensembl Transcript ID

BGIOSGA034322-TA

Ensembl Protein ID

BGIOSGA034322-PA

Length

1427

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5089524..5090950

Sequence Coding Region

5090108..5090950,5089831..5089992),complement(5089524..5089727

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5089524..5090950 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5089524..5090950 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCGGGGAAAGCGCCCGCCGGCGACGGCGGCGTCGATAGGTTAGGGGATCTTCCGGATGAAGTCCTCCAACACATCCTCGGTTTCCTCCCGGCGCAAGAAGCCGTGCAGACCTGCGTGCTGGCGCGGCGCTGGCGCCACCTCTGGAAGTCCGTCGCGACCTTGTGCATCACCAGGTGGGACTGGAAGAAGGAGGTGTCCAAGGAGAAGTTCTTGAATTTCGTGCACAGCCTTCTGTTCCACCGCGGGCGCGCGCCCATGGACAAATTCGATCTCAATCTCTCCGGCGACACCCACCTCCTGAGCATCTGGTTCCGGGAGGCCGCGATGTGCCAGGCCCGGGTGATACGGCTGAATATCATCAATTCGTGGGGATCCCAGCCCGAGCTAGACAACCTGAACCTGCCAGTCGTCTCCCGGCACTTGGCGAAGCTACAGCTTTCTGGTGTGAAATTGATGCAGAGTTTCCTCAATTTCTCGAGCTGTCCGGTGCTGGAACATCTAGAGATTGTCCATTGCGACTTGTCCGATTCCAATGCCAGGAAGATCTCTTCCCTTTCCCTGAAACACCTATACATCTTCCGTTGCAATTTCAGCCGTACTTTCCACACTCAAATTTACGCGCCGAATCTCGTCTATCTTGGTCTAGTTTATTATATGAACCGGACTCCTGTGTTTGAGGGTGTACCATTGTTAACAGAGGCAGTTGTCGGAGTCGCTGCTGAATCTGGAGATTGGAATGCTTGTCCAAGATTTGATGATAGTAACACTAACAGCTGCATGCTTCCGGAAGCTTTATCACAGGCCAAGAAGTTGGTGTTGGAAGTTGAGGAACAAGATTTTAATTTCAAAATGTACTGGCAACATTGCCCTACATTTAGCAAGTTGAAGACTTTGTTTATCAGTGTGTGCATATCAGCGATTCTTGACTTTGAAGGACTTAGTTGCATCCTTCGACACTCACCAGTTCTAGAGATCCTCACTCTTCAGTTTCATCGCTCGGAATTTAGACAAAAAGATAAGGTGGAAATGAAAGGAAGCTATAGTCGCATGGAGAAGTCATCTGCAATATCAGAACATCTTAAGATAGTCGCAATCCAATGTGATGATATAGATGATCAAGTTATCAAAGTTTTGAAGTTACTGTCTACATTTAGTATTCGTAAGCTGACTAGCAACGCTATTCATTCTTTCTGTATTTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MPPGKAPAGDGGVDRLGDLPDEVLQHILGFLPAQEAVQTCVLARRWRHLWKSVATLCITRWDWKKEVSKEKFLNFVHSLLFHRGRAPMDKFDLNLSGDTHLLSIWFREAAMCQARVIRLNIINSWGSQPELDNLNLPVVSRHLAKLQLSGVKLMQSFLNFSSCPVLEHLEIVHCDLSDSNARKISSLSLKHLYIFRCNFSRTFHTQIYAPNLVYLGLVYYMNRTPVFEGVPLLTEAVVGVAAESGDWNACPRFDDSNTNSCMLPEALSQAKKLVLEVEEQDFNFKMYWQHCPTFSKLKTLFISVCISAILDFEGLSCILRHSPVLEILTLQFHRSEFRQKDKVEMKGSYSRMEKSSAISEHLKIVAIQCDDIDDQVIKVLKLLSTFSIRKLTSNAIHSFCIS</aaseq>

Gene Sequence

<dnaseqindica>1..843#959..1120#1224..1427#ATGCCTCCGGGGAAAGCGCCCGCCGGCGACGGCGGCGTCGATAGGTTAGGGGATCTTCCGGATGAAGTCCTCCAACACATCCTCGGTTTCCTCCCGGCGCAAGAAGCCGTGCAGACCTGCGTGCTGGCGCGGCGCTGGCGCCACCTCTGGAAGTCCGTCGCGACCTTGTGCATCACCAGGTGGGACTGGAAGAAGGAGGTGTCCAAGGAGAAGTTCTTGAATTTCGTGCACAGCCTTCTGTTCCACCGCGGGCGCGCGCCCATGGACAAATTCGATCTCAATCTCTCCGGCGACACCCACCTCCTGAGCATCTGGTTCCGGGAGGCCGCGATGTGCCAGGCCCGGGTGATACGGCTGAATATCATCAATTCGTGGGGATCCCAGCCCGAGCTAGACAACCTGAACCTGCCAGTCGTCTCCCGGCACTTGGCGAAGCTACAGCTTTCTGGTGTGAAATTGATGCAGAGTTTCCTCAATTTCTCGAGCTGTCCGGTGCTGGAACATCTAGAGATTGTCCATTGCGACTTGTCCGATTCCAATGCCAGGAAGATCTCTTCCCTTTCCCTGAAACACCTATACATCTTCCGTTGCAATTTCAGCCGTACTTTCCACACTCAAATTTACGCGCCGAATCTCGTCTATCTTGGTCTAGTTTATTATATGAACCGGACTCCTGTGTTTGAGGGTGTACCATTGTTAACAGAGGCAGTTGTCGGAGTCGCTGCTGAATCTGGAGATTGGAATGCTTGTCCAAGATTTGATGATAGTAACACTAACAGCTGCATGCTTCCGGAAGCTTTATCACAGGCCAAGAAGTTGGTGTTGGAAGTTGAGGAACAAGATGTATGTTATGCACTCATGCTTTCTCATTCACTGCCACCACATGTGCTTTAATTTCTTACATCATCTGTTTTCTGCGAGTATTAGTTGATCTTTTTGTGTTTTGCCTTTTGTCCAGTTTAATTTCAAAATGTACTGGCAACATTGCCCTACATTTAGCAAGTTGAAGACTTTGTTTATCAGTGTGTGCATATCAGCGATTCTTGACTTTGAAGGACTTAGTTGCATCCTTCGACACTCACCAGTTCTAGAGATCCTCACTCTTCAGTTTCATCGCTCGGTGTGTATTCTAAATGAAAATCACTTCCTTGTTACAATTATCACATAACGCTGATATCTTGGCCAAGTGTTTTATTGTTATTTTGTTTCTGTTATTATTGCAGGAATTTAGACAAAAAGATAAGGTGGAAATGAAAGGAAGCTATAGTCGCATGGAGAAGTCATCTGCAATATCAGAACATCTTAAGATAGTCGCAATCCAATGTGATGATATAGATGATCAAGTTATCAAAGTTTTGAAGTTACTGTCTACATTTAGTATTCGTAAGCTGACTAGCAACGCTATTCATTCTTTCTGTATTTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034322