Os11g0200000

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Revision as of 09:03, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0200000| Description = Histone deacetylase family protein| Version = NM_001073972.1 GI:115484592 GeneID:4350006| Length = 1756 bp| Definit...")
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Gene Name

Os11g0200000

Description

Histone deacetylase family protein

Version

NM_001073972.1 GI:115484592 GeneID:4350006

Length

1756 bp

Definition

Oryza sativa Japonica Group Os11g0200000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5011039..5012794

Sequence Coding Region

5011229..5012599

Expression

GEO Profiles:Os11g0200000

Genome Context

<gbrowseImage1> name=NC_008404:5011039..5012794 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5011039..5012794 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccggcgggaactcgctgccgtcgccgtcgtgcgccgatgacaagaagcggcgggtgtgctactactacgaccccggcatcgcccacatcaaattcagcgacgaccatgtcatggtgcccgcccgcgtcgccatggcgcacagcctcgtcggcgtctacggcatgctcggcgacatgcgccgcctccgcacgagacccgccacggaggcggagatccgccgcttccactcgccggagtacgtcgacctcctccgcgacctcaccccggagagctacttcaacgacgccgcgcttcggcagaaggcggaggatgaccacggcatcggcggcgacgacgattgccccgccttcgaccgcctctggaagtactgccgcggctacgccggcgggtcgttcgccgcggcgcgcgcgcttgtcgacggcgcctccgacatcgccatcaactggtccggcggcatgcaccacgcgtccgcctgcaaggccaccggcttctgctacgtcaacgacatcgtgctcgccatcaacgagctcctcggcaccttcaggcgagtcatctacgtcgacatcgacgcgcaccacggcgacggcgtgcagaacgccttcttggactccaaccgggtcatgacgctgtcgttccaccggtacggcaaaatcacgccccacaaggacttcttcccgggctccggcgccatcaacgaaatcggcgacggcgccggcgagcactacagcgtgaacgtgcccctggacgccggcgtccgcgacgacgtgtaccacacgctgttcaagccgatcgtgggcaaggccatggaggtgttccagccggaggccatcgtgctgcagtgcggcgccgactcgctctccggcgaccgcctcggcggcatggagctgtcggtgcggggccacgcggagtgcgtcagcttcctccgcgggttcaacctgccgctgctcctcgtcggcggcggcggctacaccatcaaccacgtcgcctccgcgtggtgctacgagacggcggtcgccgtcggcaaggagaggaagctccccgacgacatagagatacccagccacggctacgagctcatgtacaagaaccaggggaacaagctccattacaagacgtcgacagcgacggcggcgagaaagaggtcgagcagcacggaggtcaccaaggggaaggtgctcgagcacctgtcgcaggtcaagcgcgcgccgagcgtgcagttccaggagcgacgcggcggcgacaatgccgccggagttgggctctactacgagcgccctccgagcctggaagacgacgaacccgcgcagaggctgcaccgcctctgcttccctggcctgacgaagcgtatcaggctcaatgactga</cdnaseq>

Protein Sequence

<aaseq>MATGGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPAR VAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYFNDAALRQ KAEDDHGIGGDDDCPAFDRLWKYCRGYAGGSFAAARALVDGASDIAINWSGGMHHASA CKATGFCYVNDIVLAINELLGTFRRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYG KITPHKDFFPGSGAINEIGDGAGEHYSVNVPLDAGVRDDVYHTLFKPIVGKAMEVFQP EAIVLQCGADSLSGDRLGGMELSVRGHAECVSFLRGFNLPLLLVGGGGYTINHVASAW CYETAVAVGKERKLPDDIEIPSHGYELMYKNQGNKLHYKTSTATAARKRSSSTEVTKG KVLEHLSQVKRAPSVQFQERRGGDNAAGVGLYYERPPSLEDDEPAQRLHRLCFPGLTK RIRLND</aaseq>

Gene Sequence

<dnaseqindica>196..1566#acacggtacttctcaattggttatcatactggttgttaaaacttatctcgactagctagtttgtttgtttacgatacggttttcgttgccgactcggacagagactcatgtgtcccttttgtatatccatgtgagatttctgcaccattgctgcattctgttcgatctcgatcttccaagaaggaacttggagcgatggccaccggcgggaactcgctgccgtcgccgtcgtgcgccgatgacaagaagcggcgggtgtgctactactacgaccccggcatcgcccacatcaaattcagcgacgaccatgtcatggtgcccgcccgcgtcgccatggcgcacagcctcgtcggcgtctacggcatgctcggcgacatgcgccgcctccgcacgagacccgccacggaggcggagatccgccgcttccactcgccggagtacgtcgacctcctccgcgacctcaccccggagagctacttcaacgacgccgcgcttcggcagaaggcggaggatgaccacggcatcggcggcgacgacgattgccccgccttcgaccgcctctggaagtactgccgcggctacgccggcgggtcgttcgccgcggcgcgcgcgcttgtcgacggcgcctccgacatcgccatcaactggtccggcggcatgcaccacgcgtccgcctgcaaggccaccggcttctgctacgtcaacgacatcgtgctcgccatcaacgagctcctcggcaccttcaggcgagtcatctacgtcgacatcgacgcgcaccacggcgacggcgtgcagaacgccttcttggactccaaccgggtcatgacgctgtcgttccaccggtacggcaaaatcacgccccacaaggacttcttcccgggctccggcgccatcaacgaaatcggcgacggcgccggcgagcactacagcgtgaacgtgcccctggacgccggcgtccgcgacgacgtgtaccacacgctgttcaagccgatcgtgggcaaggccatggaggtgttccagccggaggccatcgtgctgcagtgcggcgccgactcgctctccggcgaccgcctcggcggcatggagctgtcggtgcggggccacgcggagtgcgtcagcttcctccgcgggttcaacctgccgctgctcctcgtcggcggcggcggctacaccatcaaccacgtcgcctccgcgtggtgctacgagacggcggtcgccgtcggcaaggagaggaagctccccgacgacatagagatacccagccacggctacgagctcatgtacaagaaccaggggaacaagctccattacaagacgtcgacagcgacggcggcgagaaagaggtcgagcagcacggaggtcaccaaggggaaggtgctcgagcacctgtcgcaggtcaagcgcgcgccgagcgtgcagttccaggagcgacgcggcggcgacaatgccgccggagttgggctctactacgagcgccctccgagcctggaagacgacgaacccgcgcagaggctgcaccgcctctgcttccctggcctgacgaagcgtatcaggctcaatgactgacgccggcgtccacgcagattaacccgaattcgccggagtgcagctgctctgctgctgtcggttggagttaagccagtcggatagacacgtggcagagatcctgttgggactgcagcctgttgactagtcaatttttttttgttagtgctttcctctcctctgaataaccgatgatacggagtatttgact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0200000, RefSeq:Os11g0200000