BGIOSGA034346

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Revision as of 08:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034346, complete gene.| tag = OsI_354...")
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Gene Name

BGIOSGA034346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034346, complete gene.

LocusTag

OsI_35454

Ensembl Transcript ID

BGIOSGA034346-TA

Ensembl Protein ID

BGIOSGA034346-PA

Length

5587

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4755081..4760667

Sequence Coding Region

4760561..4760667,4758903..4758981),complement(4758523..4758621,4758315..4758428),complement(4757933..4758105
,4757387..4757489),complement(4756961..4756995,4756654..4756735),complement(4756398..4756483
,4756095..4756310),complement(4755081..4755870

Genome Context

<gbrowseImage1> name=IndicaChromosome11:4755081..4760667 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:4755081..4760667 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCTGGACAAGCCAAGGAGACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATTGAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTTCGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCACCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGCCCCTTCTGCACCTGCCTTGAGACAGCAGAAAGCAGTGTCCATGTTGCTTCTGGACGATTTGTGTGCCTCCAAGCTCAACCCTGAGGACCTGCAGCTCAGCACAACTGGAGAGTATGGAAAGAAGCCTTACAGGCAAGACATTCATAGAACTAGGGCCATTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTGAGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAGGCTCTCGGTTTAAATGATGAATTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCCTGCTGCTGCTAATGTAAACCAAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTCCCCACTTCTTAATGTACACCATGAAGACGATGAGCCAGAAGACGAGTCTGCAAGGGATGGCACAGCAACACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCGAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGTTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATGCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGTCTTCCTAGTGGTAACAACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGCCGCAGGACTCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKETLKLLKKRLGNKNSKVQILTLYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDAAIQASLQSSAPSAPALRQQKAVSMLLLDDLCASKLNPEDLQLSTTGEYGKKPYRQDIHRTRAILSEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMDLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGVPPGSGPAPAAANVNQGTAPPRPTGVSFSPLLNVHHEDDEPEDESARDGTATQGNLPSAPKSERPYPSPLLPPPPSSKRPVFTEASSVDYLSGDSYKTEKVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSFSMPSRPMSESNRPVVNRQESLPDDDFINPTAMPGFSSSSNANKYGDSGEDLPKAPWEAQAPGSLPPPPARYGQRQQYFEQQHGLPSGNNGAGYNGLVSQTEGLSLNQRNTENERGSSVPTASRQTKPEDSLFKDLVDFAKNKPSSPSKPANSRRTR</aaseq>

Gene Sequence

<dnaseqindica>1..107#1687..1765#2047..2145#2240..2353#2563..2735#3179..3281#3673..3707#3933..4014#4185..4270#4358..4573#4798..5587#ATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCTGGGTCTGGCTTCTCTCTCTCGATGATGCCTCTGTTCGACACTTTTTTTTTTTTGGTTCTTTGATTTGTTTGAATTGTTATTGCTATCGTATGGTAGGATGGAGAATTCCTAGGTAGTTCTCTATGTTGTTCAACCCGTGAGTGATTTAATAGGGTTATCGTGGCATCTTTGGCATTTTATGTGTTGTGATCTTGCTTGCTTGTTGTATCTCGTTTAACCTACGTTTGTTTATAAAATTGTTAAATTTAGCAGGGTTTTAGTGCTGCTTCTATGAGGCATTGCATCTGTGATTTTGGCTAGTTGTTTGTTCTGTGTCTATTGCTATATGTGTTTTGTTTTTTTTTTTTGGGAAAAGCATATTCAGTCTTTTTCTTCCAAATTTATTAGGAATTTGGAATCTTAGGTTGTACGGTTGTTGGTTTGGAGAGCAGAATAACTCAATAATTGATGATAGTTTGTGATTGGTTAGTTGAGCTATAATCTCATGGAGGCCACTGATTTTGGTGATGAGTTGGTGTCATTTGTTGTTGAGGTGCAGTTTAGGTATGACATCACTTTTTGCCATGATGATATCAGCAATGAGAGCACACACACACAAAAAAAATACTCATCAGCAATGAGGGGCATGTAATTTGAGCCGTGGAAGGAAGTTTGGAAAACTTGAGCTTTGGCCTCTTTGCAATTCTTTTGTGTGGTTAGCCTCGCTAAATCGTTGTTGGACTGCTGACCGATTGGCCCATCGCAGTGTTGGCCATCTTGGGTAATATCCATTGTGTAATCAAGAGGAGGAGAATATGCAGCACTTGCTCACTTCATGTGTGTTCACAAGAAGTGTATGGTTCCCAGTTTTGTCCTTGGTTGGCTTGCAGCACCTTACATAAGGTCCCGATGACACTGTTTTCACCATGTGGTGGCTTTAAGCTTTGCAGAAAGTGGCTAAGCAACATCGCAAGGGTTTTAACTCATTAGTTGTGTTGGTGGCTTGGTTGATTTGGAAACATAGGTGGATGTGTCTTTGGAGAGGTTTCAGCTAATTTCAATTCCGTCATGCAGGATGTTAGAGATGAAGCTAATTCATGGTGTAGTTTTTTGTTGTTTCTTTGGAAAGTTCTTATAGCCTTTGTTCCTGTTATGGGCATGCATGAGTCCTTTTTAACTCTTTTCTCTTAATATAATGATGTGCAACTCTCCTGCGTGTTCAAGAGAAAAAAGAACTTTGTTTCTCTACTCTGCTGTATGTTGGTGTGATATATAGCTTCAATAATTTTTAGTCTTCCAACTTCCAATATGGTTTATATGTCTCTCCAGGCAGTGATTAAATTTTATAATCTGTGGCATTTGCTAATATTAAAATCTGTGTATGTGATGCCACACTAATTTAAGACATTTTGCTATAATTTGTTGATAATTCGGTTCATGGTTGAGTGATGCACATTGCATAATGAGTTTTGTATATTGAATTGTTGACATAATTGTTTTGTCTTAAATACTTTCTGGGATTTATTTTCAATGTTCCCATACAACTTTTGATTTGTCATGTTTTATACTATAGCATGCTCATAAATGTTTGCTGAAGTACAGACAAGCCAAGGAGACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGAGTATTTCAAGAGTCCTTGCATATTGATACTCAGTGTGTTATCTTCTGATTTTTTGTTTTAACAATGTGAGTTTTAGGTCGATTAATTCCTAAATTTAAGAATTCACCTGTCTTCACTAGCTACACAAATTTAGAAGTTATTTCTTGTTCTTCTTCCAGATTTTGGAAACTTCTTGTGCTTCTTCCAGATTTAGGAAACAAAGAGCATAGTTTCTATGTGCACAGTCATGTCTTGTTTAATATGCTGAGTTGTTCTGTTTGTTTGTCTTCCTTTTCAGGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATTGAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGGTGAGGATTATGCTCACATTCAGTGGCCAACTACTGCTTTCTTAGTTCCTACATTCTTATGCTTCTGTATTTGATTGTCAATTTATGATTTCAGCCAGATTTAAATGTTCGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGGTACTGTCTACTTGTGTTCATTCCAGATTTCTCATCTGTTATTTATCCTGTGCTATCACAGCTCATACTTGACTACTGTTCCACTCAATTTCAATCTGTTCTGCACTTTGTTTCAATGTAAACTTAGATCTTCAACGTTTTGACTTTTGAGTTAATATTCAATTGCTTCTGTCCAAACCATGAACAAGATATCCTGCCCTTGTGTGCAGAATGCTGGTGTTGATTTTCCACCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGCCCCTTCTGCACCTGCCTTGAGGTGTTCTTTTGTCCTAATGCAAAATTTGTTCGTTATTTACTTGTTCACTTCAAGCAGTACTGTCATATTCATCCATAATTTCTTAATGCCATTTACTTTGCTGTTTCTTTATGCCTTTCTTTGTTCTATTTTTCCCATTCTCTTTAGAATAACCTACTTTGGTTGGAACAAGTATGGCCTGGTTTGTAAATTCACACTTGTGTGGGGAAAGTTTCACACACATGGCCTCTATCAGAAATACTAATCAGCCTACAACCACATTAAATGGCTACGCATGTTTTAGGAGTGGAATCGTACTCACAATATGTTCTGCTCCCTCCGTTCCTCTATAGATGACACCCATTAGCCATGCAAACTTCCCAAGGCTATAAAATGTTTCCTAGTTAAATTACGAAAATGCTCCTGGATTAAAGTATCTCTATTCTGCTGAAATTGTGCATCAGACAGCAGAAAGCAGTGTCCATGTTGCTTCTGGACGATTTGTGTGCCTCCAAGCTCAACCCTGAGGACCTGCAGCTCAGCACAACTGGAGAGTATGGAAAGAAGGTTCACAGTGCATATAGGCTATCAGGCTTCAGACCTTTCTTGTTTTTTCCTAGTCACTGAGAACACATTAGTAGTTTTGATGGGCAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAAGCTGAAACCTCCGGTTGGGCCCACCAGGGGTGATATTGGAAAAATATCTGTTAGAAACTGTGGAGTGTCAAGTATTTTGGGGGAAAAAAGTGGTCAGTGATTAATTGCTTTCTTGAAGTGCGCCATCTCTGATCTAAAGTTGGAACCTCCGCTACTGATGGTTGCAATTGCCGCTATCCTTGGTTGTCCTCATTCCTAAACTCTAAAGCATACTAGAAAGTAACTATGATGCATTACATTAATAATAATTTTGTTTGTCTCCCTGTTACAGCCTTACAGGCAAGACATTCATAGAACTAGGGCCATGTAACTTTCCAAGAATTTCATACTTATATTGGTATTTCTAACAACAAAATATGGCGGTGTTAGTGTGCCAAAATAGATTTTATGTATTGCGTTGTGACAGTTTAGTTTCATAATCATGCTAAACAATACCTGAATACATCAATTGTGTTTTTCAATTTATTTCACCATCTTTGCAGAAGAAATTCTTTAGTTATAATCCACCTTTAATTATTGCTCCTTGTGCAGTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGTGACTTTTTTAAGCATCAAAATTTAGTGCAGTGTTGTATAATCCTTGTATCCAAACTTGCACTAGTGTGATGTCTCTATTCGTCTCTGTATTTAACTATTGAATCCACCATTCCACCCACCTATGCTCTTTTTCTCTAAATTTCTGTCTAATTGCGCTTCATGTTGTAGGGTGTGAGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGGTATGTTTTATTCTTTTACTCTGAAATTTTGGTTCCATGTCCTTTTCACATTGTCATGTGACTAATTGTCTTGTATCCTCTCTGCAGTGATGAGAGCCTTCTATTTCAGGCTCTCGGTTTAAATGATGAATTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCCTGCTGCTGCTAATGTAAACCAAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTCCCCACTTCTTAATGTACACCATGAAGACGATGAGCCAGAAGACGAGTTCTCCGTGCTTTCCCGCAGGCAAGCTATATTAGTTTTCCCTATTAGCACCCTTTACTAATTATTTCTCATACATGCTATTGCTATTCTAAGCTTTGGATGGTTGTGGCAACATCAGCTGACTACTCTTAAGAAAATGTTTTGGTGATGTGGATCATGTTATGATACCAAGATTCATGGTCTGTTTAGTTTTGTCATCTGATGTACAAATATATGTTCTGTAGGTCTGCAAGGGATGGCACAGCAACACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCGAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGTTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATGCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGTCTTCCTAGTGGTAACAACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGCCGCAGGACTCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034346

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034346&oldid=36322"