BGIOSGA034389

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Revision as of 08:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034389| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034389, complete gene.| tag = OsI_353...")
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Gene Name

BGIOSGA034389

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034389, complete gene.

LocusTag

OsI_35345

Ensembl Transcript ID

BGIOSGA034389-TA

Ensembl Protein ID

BGIOSGA034389-PA

Length

6917

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3816577..3823493

Sequence Coding Region

3823365..3823493,3821019..3821109),complement(3820846..3820928,3820555..3820695),complement(3819163..3819288
,3817519..3817661),complement(3817295..3817436,3816577..3816639

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3816577..3823493 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3816577..3823493 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCTGCCACAGGCACGGACCGCACATCAAGCCATTTGACGAGATTGAAGAAGAAAAACGAAAAGGCAACGGAGGGAAACGGGAAAGCAGCTAACAACACAGGATCGCCCCACCGGTGCGCCGACATACAGACAGCATTCCAGACGGGAAAATTTACTGCTGCTCAAAATCCTGCTAATAGGGAAAAAAACCGCTACAGTGATGTCATGCCATTTGATGAAACCCGGGTACGTTTAAAGCCCTCAGCAAGTGATCACCCTTCAAGCAATGAATACATCAATGCAAGCCTTATAGAGACTGATGACCAAGGTCAAAGTCATACAAAGTTCATTTCCACTCAAGGTCCCTTGGTCAAGACATTTGGGGATTTCTGGCAGATGGTCTACGAAAACCAGTGTCCTGTGATTGTTATGGTCACTAAATTTGATGGTGCCAAGTGTGACAGGTATCTTCCAACGAACGAAGGAGAAGAAAGGGATTATGGAAAATTCAGTGTTAAGATCACAAAGTTCAAATGCGATGGTGTCTTAGAATTGCGTGGTTTGGAGGTACAGCAGAATGAGTCACTTACAGTTCGCCATGTTCTCCACATTCTGTATTCTGACTGGCCTGACCATGGGGTGCCACATGACAGTGCTTTTGTACGAAAAATTTTGAAAAGATTATATGGCATTCCAAAAGAGCATCCAATAGTAGCACATTGCAGTGCAGGTATTGGGAGAACTGGTGCTTATATCACCATCCACAACACTATAGAGAGGATTTTACTTGGTGACATGTCTGCTTTGGATCTTTCTAAAACTGTCAAAAAATTTAGATCCCAGCGACCTGGAATGGTCCAAACAGAGGAACAATCAGTGCCCTGGGTATCTCTGACAGATTGTCGCCCTTCAACTCCCTCAATTCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MASSATGTDRTSSHLTRLKKKNEKATEGNGKAANNTGSPHRCADIQTAFQTGKFTAAQNPANREKNRYSDVMPFDETRVRLKPSASDHPSSNEYINASLIETDDQGQSHTKFISTQGPLVKTFGDFWQMVYENQCPVIVMVTKFDGAKCDRYLPTNEGEERDYGKFSVKITKFKCDGVLELRGLEVQQNESLTVRHVLHILYSDWPDHGVPHDSAFVRKILKRLYGIPKEHPIVAHCSAGIGRTGAYITIHNTIERILLGDMSALDLSKTVKKFRSQRPGMVQTEEQSVPWVSLTDCRPSTPSIL</aaseq>

Gene Sequence

<dnaseqindica>1..129#2385..2475#2566..2648#2799..2939#4206..4331#5833..5975#6058..6199#6855..6917#ATGGCGTCCTCTGCCACAGGCACGGACCGCACATCAAGCCATTTGACGAGATTGAAGAAGAAAAACGAAAAGGCAACGGAGGGAAACGGGAAAGCAGCTAACAACACAGGATCGCCCCACCGGTGCGCCGTCCGTCGCGCTGCCCTCCCGCTACTTTAAACATACTTACTTTATCTAAAATAAATCAACCTCTCATACAAGATATGGTATGCTCTCTCTATTCTAAATTGATCTATATATATAATATTTTTAAGGTTATTCCTAAATGATCTATGTATTTATGTTGATTCATTAAATCTATTCGTTATTTATGCATTGGAGTAAATGGACATTGATGTATGCATCCATACACACACGTATTTATAACCCATATGTAATATCTTGATTTTCTATTGGCTAGGAAATAGTGGAGATGGTGCATGCATGATGTTTGTTGCTAGAGTGAATATAATACTATAAAAGAGTTATTAGCTTTTCTTGGTCTTGGTATACCTATAAAATATGTAGATCAATTTAGAATAGAGGGAGTATCCTGTAACTATGAATCTAAACATGCATTTAAGTCTTATAGTGTTTTCACTTCATCAATTTTTTTTATTACACAGCACTAACATTTACTCCCTCTGTCCCAAAAAAAAGGCAAACCGTGGGTTTTCGTGCCAACGTTTGACTGTCCGTCTTATATGAATTTTTTTTATAATTAGTATTTTCATTATTGTTAGATGATAAAATATGATTAATACTTTATACGTGACTTATCTTTTTAATTCTTTTATATTTTTTTTAAATAAGATGAACGGTCAAATATTGGACACGAAAATCAGTGCTTGTTTTTTTTTTTATTTACTTTACGGAGGGAGTAGTATATAACAACACTGTTTTACGACAATCCCATTGACTTGGTTCGCGGTCAATCACAAATTCGCAATCATAACAGACGCTCCCCAATCCCCAGTTCCCCACCCCCCCGGCCCCACCCACACACAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTGCGAACTGGTTCGGCACTAGGTTTAATTTTAGGGTCGTTTACTCGTCCTTGGGAATTGTCGAATTAAGAATGAACTCAGTAGCTAGTCGAACTGTATGATGATAACTACTTAACTAGTGCTATTTTGTCTTACAAGTTTGGTTGGTCTGCTGCATACTTGCATTGCTTTGAAGTAAAGCATCAGGGTAGAGGAGAATTCATGTGATTGCATCATACGGAAATAAGTGCCTTGTTTCAGTGCCTTTTCAGCGGGATAAAAGATGATTGCAGTCTATCTTTCTCGTGGGAGAATGGAGATAGCTAACACGGGCCGTTGTCTTAGCAATATCAGTATGATCCATTCGATATGTATGGACTTTAGAACAATATACTTTTGGTTTTGTGGAGTTTTTGTTGCTAGTCCTATGCTTCACCCAAACTAGTACGTGATGATGAAAAAGGCTATATTTCATTTTGAGTAATACTTTTTATGTGTAATTCTAGTCCCGTGGTCTCTTCACCAAAACTGGACATATTTCTTCTCATTTAGTTAACTACTGCATCACATGTACCTTGATGCAGTAAAGTAGTTCAGTTTGGGGGTTGCGTACCGTGTAAAGCTATTAAGCCATCATTGTTGGAACCGATTGTGATTTGATATTACAATCAACAATCACTTATATGGACTAGGGATATGTATGCTCCATTTCTTACATTATCTTGGGGGTATATAACTGTATTCTTCATGTCTCTAACCCCTTACAATGATCATATACAGGTTATCCAAATTTATAGTAGTTTTTATGAGACGAGTAGTTATCCAAATTTATCCAACTATGAATTATTTTTTCTAGTGGCATCTCAACCATATCAAATGTTGTATGAACCAACTGATTAGACACTCTTTTCTGTACGGAGAACAAAACTCATGAAGATGAGAAGTCTTATGACAATTTCATTCAAATCTATATTTGTGTCGTGTTATTGCACATTTCAAAATCCATACTCTACCCAATGTAATGGAAAACTGGCTACACTTTCGTCCATATATATGAGAAGAAACATGTATTGGACTATGTATTGTTCAGATGACCTAATGTACTGAGAAATGTTGGAATTGATTTCTCAATTATTATTATTTCTTTCAAACTTCTTATCAAGTATGAGAAATCTTCTGAATTTCTTTTGAAATTGAGTGATATAAAGTTGCAACTCATTTCTCCTTAATAAAACATTTGAGGCAGCAAGCATTGGTTAAATTTTTGAATCCTACTATTTTTTTTTGTCTAAACATGCTCTGCATTTCTTACAAAGTCTGTGAAAGACTGAGAGTAGTTCATATCTGGTTCTATATTTCACAGGACATACAGACAGCATTCCAGACGGGAAAATTTACTGCTGCTCAAAATCCTGCTAATAGGGAAAAAAACCGCTACAGTGATGTCATGCCATGTGAGCATTATCAACTTGTGTTGGCTGCTGTATGTTAGCCAAGAGACCTCCATGGCGTATTATTAGTTTGACTTAACTTCTCTTCTTTAGTTGATGAAACCCGGGTACGTTTAAAGCCCTCAGCAAGTGATCACCCTTCAAGCAATGAATACATCAATGCAAGCCTTATAGAGGTAAAAACACAGGGGCATATTTCCTGGTGTTTATGTTATACACGAGTTTCCATCTTTTTCAATACTGAATGTTTCAAATCCTAGATGGGACATGGGACCTCTGGATTTGTTATAGCCTTATAGGTTATTTATGTGGTATAATATTTACAGACTGATGACCAAGGTCAAAGTCATACAAAGTTCATTTCCACTCAAGGTCCCTTGGTCAAGACATTTGGGGATTTCTGGCAGATGGTCTACGAAAACCAGTGTCCTGTGATTGTTATGGTCACTAAATTTGATGGTGCCAAGGTGCTAATGTTGTACACTCCTGAATTCTCAGTTTCCAAGTTTTATTTACTTGTCTTTACAACATATTATTGGGTTGCTCTTTCCCTGCATTATGTTGAGGCTACCCCAACTCCACTTATCCAACTATGTCCTACATGTTTTAATATTTTTATTATCATTATCATTGTCATGCTGAAGTCTTAATTTCACATCTCCATGGATCCCCCTCTTTTGCTTTGTTCAAATGGGCATGAATTTTTTTGTTGACTGTTGCAAATCTGGATGCGGCTGTTACATACTTGCATGTATGCATCATCTCAGATGGTTTTGTTATCATCATATATTGATATGTAATCTGGCCATTGGAAGATGAAATAGCTTGCATCTCTATGGAGGGCACATATACATCACCTAGATTGTCATATGCAATTGAGAACATAAAATGAACAGAAAATTAAGATCTTGAATCTTTATGCTTGCGATTGACACATACAGCTGTCAGGTTCAGAGGTTCTATGTAATTCTTAACCCAAATACACTCATGATTGCTTCACATATGCATATTTTAACTTGCTAAAAGCCAATTGCAGTATGCTGATCTCAACCATGAGTTGATCCTGCCTGCTCATATTGCAATACTTTGATTTCTACCGAAGTGCTTAGTGTAATCTGATTTGGATTTACAATTTACTTTTGGTTGTCTATTTCATGTTTGGAATTGATGTACAGAAAATAGCATGGCATGTAAGATGATTGCTGTGTTAACAAATTGTCCTTATGTAATCGATTCAATATTACAGTAGAATGAGTACTGTAAATACTTGCATGACAATTACAGTATGATGATTGGATAGTATTTTCTGTCTTAGTTTATGTTTTTGATATAATTGTTTTGAGATTATGACTTTGAGAACTACTCCCTCCTTCCCTAAATGTTTGGCGCCGTTGACTTTTTCAAACATGTTTGACCGTTTGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATAAAAGTATATTTAACAATGAATCAAATGGTAGGAAAAGAATTAATAATTGCCTAAATTTTTTGAATAAGACGAACGATCAAACATGTTTAAAAAAGTCAACGGTGTCAAACATTTAGGAATGTAGGGAGTATTTGTCTATTACTGGATGATACCAAAAAATGTATTAAGTTCATTGATGTAGACATACAACTTGAATTTCCGACTATTTTCAACTAATTACTTTAATAAAATTTTATTAAATTATTAACTTTGAAAAAATGGCAGTGTGACAGGTATCTTCCAACGAACGAAGGAGAAGAAAGGGATTATGGAAAATTCAGTGTTAAGATCACAAAGTTCAAATGCGATGGTGTCTTAGAATTGCGTGGTTTGGAGGTACAGCAGAATGAGGTAAAGATTTTCAAAGGCCATCAGCTACGTTTTCTTGTTGCTATTAGTGAAGTGTAAGGTAGGTTATACTTCTGTTCAAAAAACAGGTAGGTTATACTAGCAAGGCCTATTCCTATGTTTTGCATCATAGGTTATCAATTTCAAGATTACAGTTGTTCGTAGATGGATATATTTAAGCTCCTCTTTGCGGCATATCTTAAACAAATGAAGAATTACATCTATATGCTTGTATCATAGCTCAGAGATTTCCCCAGGTTAGGGCCTGCTTGGAAGTCCGGTTTTTGGCCTAATATGAGTACAACACTTCTGAAAACTTTTACATTCTGGACTTGGAAGTTGAAATAGGTGCTTTTATGGGTCAGTAACCCATTAACTATCCCTATCTTAGGCCTATACGACTGGAAAATGGATGACCTTGGAAGGCCACACTATTTTTCACACATTTTTTCTGAGAAATCTCAGGCTTGCCTTGAGCTCGAGCTTGCTCCACCCTCCTCGCCTCAGTGCCTCATTGCCACTGCCACTTCTACAGTAACCACCAACATCCTCCTGGCTTGAATGAGCGACGCGGGCCTCCTCCAGCTTGAATCCATGCCACTGCCCCCCTCATATTGGTGATCCAAGTTGTCATGTCGTCTGTTCTCGATACAGCCCTCCTGGAGATAGGCAGCAAACCCATTAGCAGGTGCAGCAGCGGTCACTCTGTTAGTTACTCTAGAGAACATGGGCATCAACAACAGATGGCGATGCCAGTGACCTCTGCCAGTGCTGAGTGGATTTCCTCTGCCTTTGATAGCATAGCACACGCCTCATCCTCATCACCCCTGTCCCTGAATGTGCATAGCTTTTTCAATGATTCGGTCTGAACTTGATACCAGTGAGTATAAATTATGTTGTGTTGTTGCATGTATAGATTCAGAATTTGCTTTCCTTGATTCTAAAACATTTGTTGTGTACTCGCTTCTAAAGCATGCTATTGGGCAATAGACAGTCAAATTTGCTCATGATCTGTGCTCGATGCATTCAAAGTACTCCGTATATGACTATGACTTGTTTGCTTGGTTCCCAAACAGTATTTTACGAGGTAAACAATCATGTTAAGGGGGGTGCTACTGCATAGGAAATTACAACTGTAATATTTTGTCAGGTGTAAATATTTACCAAACTTCCAAGCAGGCCCTTAGGATGCTCGTGTTTAAATTTGCTGAGTGAGACGACAAATTATCCATGGCATACAAGCTGTATTTACCTTTAGTTGAATATATTATCAAGCTTCCTTCTGCTATGTGTGTTGCATATTCTATAGCTGGAAACAGGCAACCCATCTTATTTTCTTACTTTTTTTTTTCTTCTCATTGCTTCCATGTTTTCTCCTGTACTTCTTCCTCCATGTTTGCTTCCCTCTCTATTTCCTTAAGATGTCATCATAAGAAATGTTCCATTGCTATGCTGAAGAGTTATGACCAGAGTATCTCCTGACTGCTAATTTCTGACATTTCAGTCACTTACAGTTCGCCATGTTCTCCACATTCTGTATTCTGACTGGCCTGACCATGGGGTGCCACATGACAGTGCTTTTGTACGAAAAATTTTGAAAAGATTATATGGCATTCCAAAAGAGCATCCAATAGTAGCACATTGCAGGTTTGATTGAAATTAATGCCATTCTTCCATGTGCACCTATCCCTATACACAAACTCAATACTATTGTTTTTTCTTTCTGCAGTGCAGGTATTGGGAGAACTGGTGCTTATATCACCATCCACAACACTATAGAGAGGATTTTACTTGGTGACATGTCTGCTTTGGATCTTTCTAAAACTGTCAAAAAATTTAGATCCCAGCGACCTGGAATGGTCCAAACAGAGGTATGTGTGGCTCTTTATTTCTCTGCCTCTGCTACAAAATCCTCTGAATTTGACAATAGTTTCTGTATAGTGGAGCTAGTATGTACCTTAGAAGAAGTATGTTGTTATTTATTTTATGTACTGCAGTTAGTGAACATGTGACTCGTGAAAAGTGACAACTGTACCCTAAATCTGACGCTTAGCCTTTTTTTTTTTATTACAAAATATGGTGCTCCGTTGATCTTTTGCTTTGTAAGGACAGTACGTAGAAAGCAGCAATCGGTGACTTTCTTGTCTTTAAGGCTTAGTTGGGTTTTCTGGATTACGGATATGCTTTAGTTGGATTGTCAGAATATTATCCATCGAAATAACAGTGCCTGAGGCTACCTAAGAGTAGCACAGAATAAGGATCACTGCAGATACTGTCCTAATTCAACATTTTACTCTGCAGGATCAATACAAGTTTTGCTATATGGCAGTTGTCTCTGAGCTGAACGACCTGCTATCAAATTCAAAACACTGAATCATTTCTATGGTATGTTTCTTGCACGAGGACCTTACTATACGCACTATCCATTACGCGGTATCACAAGCTGTACAAACATATGCTTGTTTGCATCAGTAATCTCGAAATGTTGCATATCTCAATTCTCGTCTCATATCTTCTCCTCTGCAGGAACAATCAGTGCCCTGGGTATCTCTGACAGATTGTCGCCCTTCAACTCCCTCAATTCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034389

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034389&oldid=36365"